RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 BADQ92934 168 aa20.56■□□□□ 0.88
CACNB3-222ENST00000552465 SPATC1LQ9H0A9 340 aa20.56■□□□□ 0.88
CACNB3-222ENST00000552465 PRDM5Q9NQX1 630 aaPredicted RBP20.56■□□□□ 0.88
CACNB3-222ENST00000552465 A0A1W2PRG0 241 aa20.55■□□□□ 0.88
CACNB3-222ENST00000552465 POLR3DP05423 398 aaPredicted RBP20.55■□□□□ 0.88
CACNB3-222ENST00000552465 ERCC3P19447 782 aa20.55■□□□□ 0.88
CACNB3-222ENST00000552465 TRIM60Q495X7 471 aa20.55■□□□□ 0.88
CACNB3-222ENST00000552465 RIOK1Q9BRS2 568 aaKnown RBP20.55■□□□□ 0.88
CACNB3-222ENST00000552465 C1orf115Q9H7X2 142 aa20.55■□□□□ 0.88
CACNB3-222ENST00000552465 MYO5AQ9Y4I1 1855 aaKnown RBP20.54■□□□□ 0.88
CACNB3-222ENST00000552465 PRAMEF19Q5SWL8 479 aa20.54■□□□□ 0.88
CACNB3-222ENST00000552465 ZKSCAN2Q63HK3 967 aa20.54■□□□□ 0.88
CACNB3-222ENST00000552465 MAFAQ8NHW3 353 aaPredicted RBP20.54■□□□□ 0.88
CACNB3-222ENST00000552465 TANGO6Q9C0B7 1094 aa20.54■□□□□ 0.88
CACNB3-222ENST00000552465 PDLIM7Q9NR12 457 aa20.54■□□□□ 0.88
CACNB3-222ENST00000552465 SLC5A4Q9NY91 659 aa20.54■□□□□ 0.88
CACNB3-222ENST00000552465 MYH1P12882 1939 aa20.53■□□□□ 0.88
CACNB3-222ENST00000552465 TRIM43BA6NCK2 446 aa20.53■□□□□ 0.88
CACNB3-222ENST00000552465 MYCNP04198 464 aaPredicted RBP20.53■□□□□ 0.88
CACNB3-222ENST00000552465 ADCYAP1R1P41586 468 aa20.53■□□□□ 0.88
CACNB3-222ENST00000552465 SMAD3P84022 425 aaKnown RBP20.53■□□□□ 0.88
CACNB3-222ENST00000552465 C1orf53Q5VUE5 145 aa20.53■□□□□ 0.88
CACNB3-222ENST00000552465 SH3RF1Q7Z6J0 888 aa20.53■□□□□ 0.88
CACNB3-222ENST00000552465 TRIM43Q96BQ3 446 aaPredicted RBP20.53■□□□□ 0.88
CACNB3-222ENST00000552465 MROH8Q9H579 483 aa20.53■□□□□ 0.88
CACNB3-222ENST00000552465 MAGEB6P1A0A0J9YX57 407 aa20.52■□□□□ 0.88
CACNB3-222ENST00000552465 MPHOSPH10O00566 681 aaKnown RBP20.52■□□□□ 0.88
CACNB3-222ENST00000552465 DSG3P32926 999 aa20.52■□□□□ 0.88
CACNB3-222ENST00000552465 LRRC41Q15345 812 aa20.52■□□□□ 0.88
CACNB3-222ENST00000552465 KIAA1755Q5JYT7 1200 aa20.52■□□□□ 0.88
CACNB3-222ENST00000552465 ABRAQ8N0Z2 381 aa20.52■□□□□ 0.88
CACNB3-222ENST00000552465 MB21D1Q8N884 522 aa20.52■□□□□ 0.88
CACNB3-222ENST00000552465 FERMT2Q96AC1 680 aa20.52■□□□□ 0.88
CACNB3-222ENST00000552465 TTYH1Q9H313 450 aaPredicted RBP20.52■□□□□ 0.88
CACNB3-222ENST00000552465 LTBP2Q14767 1821 aa20.51■□□□□ 0.87
CACNB3-222ENST00000552465 EVX2Q03828 476 aa20.51■□□□□ 0.87
CACNB3-222ENST00000552465 PLS1Q14651 629 aa20.51■□□□□ 0.87
CACNB3-222ENST00000552465 NCAPG2Q86XI2 1143 aa20.51■□□□□ 0.87
CACNB3-222ENST00000552465 MYLIPQ8WY64 445 aa20.51■□□□□ 0.87
CACNB3-222ENST00000552465 MCM9Q9NXL9 1143 aa20.51■□□□□ 0.87
CACNB3-222ENST00000552465 TLE2Q04725 743 aa20.5■□□□□ 0.87
CACNB3-222ENST00000552465 FAM47AQ5JRC9 791 aa20.5■□□□□ 0.87
CACNB3-222ENST00000552465 MAML3Q96JK9 1138 aa20.5■□□□□ 0.87
CACNB3-222ENST00000552465 CRNKL1Q9BZJ0 848 aaKnown RBP20.5■□□□□ 0.87
CACNB3-222ENST00000552465 RLFQ13129 1914 aa20.49■□□□□ 0.87
CACNB3-222ENST00000552465 ZNF236Q9UL36 1845 aa20.49■□□□□ 0.87
CACNB3-222ENST00000552465 TMEM179Q6ZVK1 233 aa20.49■□□□□ 0.87
CACNB3-222ENST00000552465 AACSQ86V21 672 aa20.49■□□□□ 0.87
CACNB3-222ENST00000552465 SIAH1Q8IUQ4 282 aa20.49■□□□□ 0.87
CACNB3-222ENST00000552465 ATG4CQ96DT6 458 aa20.49■□□□□ 0.87
CACNB3-222ENST00000552465 PHF24Q9UPV7 400 aa20.49■□□□□ 0.87
CACNB3-222ENST00000552465 TACC3Q9Y6A5 838 aa20.49■□□□□ 0.87
CACNB3-222ENST00000552465 FLOT1O75955 427 aa20.48■□□□□ 0.87
CACNB3-222ENST00000552465 FCER1AP12319 257 aa20.48■□□□□ 0.87
CACNB3-222ENST00000552465 ITGB8P26012 769 aa20.48■□□□□ 0.87
CACNB3-222ENST00000552465 SLC9C2Q5TAH2 1124 aa20.48■□□□□ 0.87
CACNB3-222ENST00000552465 NRBP1Q9UHY1 535 aa20.48■□□□□ 0.87
CACNB3-222ENST00000552465 CYP2D6P10635 497 aa20.47■□□□□ 0.87
CACNB3-222ENST00000552465 PDE6AP16499 860 aa20.47■□□□□ 0.87
CACNB3-222ENST00000552465 TTF1Q15361 905 aaPredicted RBP20.47■□□□□ 0.87
CACNB3-222ENST00000552465 SPICE1Q8N0Z3 855 aa20.47■□□□□ 0.87
CACNB3-222ENST00000552465 SLC44A5Q8NCS7 719 aa20.47■□□□□ 0.87
CACNB3-222ENST00000552465 DCP1AQ9NPI6 582 aaPredicted RBP20.47■□□□□ 0.87
CACNB3-222ENST00000552465 XPNPEP3Q9NQH7 507 aa20.47■□□□□ 0.87
CACNB3-222ENST00000552465 TMX2Q9Y320 296 aa20.47■□□□□ 0.87
CACNB3-222ENST00000552465 UNC80Q8N2C7 3258 aa20.46■□□□□ 0.87
CACNB3-222ENST00000552465 CLTBP09497 229 aa20.46■□□□□ 0.87
CACNB3-222ENST00000552465 RARBP10826 455 aa20.46■□□□□ 0.87
CACNB3-222ENST00000552465 FOSL2P15408 326 aa20.46■□□□□ 0.87
CACNB3-222ENST00000552465 EPHB4P54760 987 aa20.46■□□□□ 0.87
CACNB3-222ENST00000552465 ERC1Q8IUD2 1116 aa20.46■□□□□ 0.87
CACNB3-222ENST00000552465 SDR42E1Q8WUS8 393 aa20.46■□□□□ 0.87
CACNB3-222ENST00000552465 ARHGEF10LQ9HCE6 1279 aa20.46■□□□□ 0.87
CACNB3-222ENST00000552465 SWAP70Q9UH65 585 aa20.46■□□□□ 0.87
CACNB3-222ENST00000552465 TMEM265A0A087WTH1 108 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 KIAA0355O15063 1070 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 SLC25A27O95847 323 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 TMEM132BQ14DG7 1078 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 CLEC10AQ8IUN9 316 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 ITPRIPQ8IWB1 547 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 DYNLL2Q96FJ2 89 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 RNPC3Q96LT9 517 aaKnown RBP20.45■□□□□ 0.86
CACNB3-222ENST00000552465 VCPKMTQ9H867 229 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 PRDM6Q9NQX0 595 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 ADAMTS5Q9UNA0 930 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 EXOC6BQ9Y2D4 811 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 ZNF532Q9HCE3 1301 aa20.45■□□□□ 0.86
CACNB3-222ENST00000552465 PGK1P00558 417 aa20.44■□□□□ 0.86
CACNB3-222ENST00000552465 AKR1B1P15121 316 aa20.44■□□□□ 0.86
CACNB3-222ENST00000552465 ICA1Q05084 483 aa20.44■□□□□ 0.86
CACNB3-222ENST00000552465 CEP85Q6P2H3 762 aa20.44■□□□□ 0.86
CACNB3-222ENST00000552465 SAMD1Q6SPF0 538 aaPredicted RBP20.44■□□□□ 0.86
CACNB3-222ENST00000552465 RNF180Q86T96 592 aa20.44■□□□□ 0.86
CACNB3-222ENST00000552465 FTSJ3Q8IY81 847 aaKnown RBP20.44■□□□□ 0.86
CACNB3-222ENST00000552465 LCORLQ8N3X6 602 aa20.44■□□□□ 0.86
CACNB3-222ENST00000552465 MMP19Q99542 508 aa20.44■□□□□ 0.86
CACNB3-222ENST00000552465 TINF2Q9BSI4 451 aa20.44■□□□□ 0.86
CACNB3-222ENST00000552465 SH2D4AQ9H788 454 aa20.44■□□□□ 0.86
CACNB3-222ENST00000552465 TCRBV5S4A2TA0A5A2 114 aa20.43■□□□□ 0.86
CACNB3-222ENST00000552465 WDR46O15213 610 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms