RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 EXOSC10Q01780 885 aaKnown RBP5.37□□□□□ -1.55
USP44-208ENST00000552440 PRKCQQ04759 706 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 POU5F1BQ06416 359 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 VPS72Q15906 364 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 KIF4BQ2VIQ3 1234 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 ZNF280DQ6N043 979 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 NFXL1Q6ZNB6 911 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 SH3TC2Q8TF17 1288 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 APPBP2Q92624 585 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 ZNF408Q9H9D4 720 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 TMEM39AQ9NV64 488 aa5.37□□□□□ -1.55
USP44-208ENST00000552440 MAP3K20Q9NYL2 800 aaKnown RBP5.37□□□□□ -1.55
USP44-208ENST00000552440 FGAP02671 866 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 CTSBP07858 339 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 GSTP1P09211 210 aaKnown RBP5.36□□□□□ -1.55
USP44-208ENST00000552440 MASP1P48740 699 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 PWP1Q13610 501 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 RASA3Q14644 834 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 ZRSR2Q15696 482 aaKnown RBP5.36□□□□□ -1.55
USP44-208ENST00000552440 PKN1Q16512 942 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 IFI16Q16666 785 aaKnown RBP5.36□□□□□ -1.55
USP44-208ENST00000552440 DTHD1Q6ZMT9 781 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 DEPDC7Q96QD5 511 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 KANSL2Q9H9L4 492 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 ABCB6Q9NP58 842 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 PPP1R9AQ9ULJ8 1098 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 SNX11Q9Y5W9 270 aa5.36□□□□□ -1.55
USP44-208ENST00000552440 CFAP69A5D8W1 941 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 F6X3S4 739 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 TMPRSS2O15393 492 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 SSBP05455 408 aaKnown RBP eCLIP5.35□□□□□ -1.55
USP44-208ENST00000552440 KRT18P05783 430 aaKnown RBP5.35□□□□□ -1.55
USP44-208ENST00000552440 C8AP07357 584 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 HCLS1P14317 486 aaPredicted RBP5.35□□□□□ -1.55
USP44-208ENST00000552440 FUT4P22083 530 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 EIF4A3P38919 411 aaKnown RBP5.35□□□□□ -1.55
USP44-208ENST00000552440 NASPP49321 788 aaPredicted RBP5.35□□□□□ -1.55
USP44-208ENST00000552440 CCDC85BQ15834 202 aaPredicted RBP5.35□□□□□ -1.55
USP44-208ENST00000552440 ZNF792Q3KQV3 632 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 RELL1Q8IUW5 271 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 PI4K2BQ8TCG2 481 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 ANKRD24Q8TF21 1146 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 TMEM40Q8WWA1 233 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 EAF1Q96JC9 268 aaPredicted RBP5.35□□□□□ -1.55
USP44-208ENST00000552440 TMEM74Q96NL1 305 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 TRIM55Q9BYV6 548 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 SAMM50Q9Y512 469 aa5.35□□□□□ -1.55
USP44-208ENST00000552440 MINDY4BA8MYZ0 360 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 RNGTTO60942 597 aaKnown RBP5.34□□□□□ -1.55
USP44-208ENST00000552440 FARP2O94887 1054 aaPredicted RBP5.34□□□□□ -1.55
USP44-208ENST00000552440 FAM87AP0C7U9 286 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 BRD3Q15059 726 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 SYCP2LQ5T4T6 812 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 HOMER1Q86YM7 354 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 HRASLS5Q96KN8 279 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 FANCD2OSQ96PS1 177 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 CCDC86Q9H6F5 360 aaKnown RBP5.34□□□□□ -1.55
USP44-208ENST00000552440 SSU72Q9NP77 194 aaKnown RBP5.34□□□□□ -1.55
USP44-208ENST00000552440 KCNQ5Q9NR82 932 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 EFR3BQ9Y2G0 817 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 ESYT3A0FGR9 886 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 FAM221BA6H8Z2 402 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 FOSP01100 380 aaPredicted RBP5.34□□□□□ -1.55
USP44-208ENST00000552440 NEFMP07197 916 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 GBP2P32456 591 aaPredicted RBP5.34□□□□□ -1.55
USP44-208ENST00000552440 ETFBP38117 255 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 SOX9P48436 509 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 NFE2Q16621 373 aaPredicted RBP5.34□□□□□ -1.55
USP44-208ENST00000552440 BRDTQ58F21 947 aaPredicted RBP5.34□□□□□ -1.55
USP44-208ENST00000552440 SCARA3Q6AZY7 606 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 ANKS3Q6ZW76 656 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 LRP10Q7Z4F1 713 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 ZNF296Q8WUU4 475 aaPredicted RBP5.34□□□□□ -1.55
USP44-208ENST00000552440 ARNT2Q9HBZ2 717 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 GINM1Q9NU53 330 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 FAM53CQ9NYF3 392 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 GTF2IRD1Q9UHL9 959 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 NRBP1Q9UHY1 535 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 PPM1HQ9ULR3 514 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 SCINQ9Y6U3 715 aa5.34□□□□□ -1.55
USP44-208ENST00000552440 KLF4O43474 513 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 TSPAN6O43657 245 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 MAN1A1P33908 653 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 CDKN1CP49918 316 aaPredicted RBP5.33□□□□□ -1.56
USP44-208ENST00000552440 FCGRTP55899 365 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 JAG1P78504 1218 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 RAB33AQ14088 237 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 ANGEL2Q5VTE6 544 aaKnown RBP5.33□□□□□ -1.56
USP44-208ENST00000552440 FBXL19Q6PCT2 694 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 PPM1EQ8WY54 764 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 RHOVQ96L33 236 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 SLC38A3Q99624 504 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 ARPC5LQ9BPX5 153 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 NT5C1AQ9BXI3 368 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 CASS4Q9NQ75 786 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 DISC1Q9NRI5 854 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 GPN3Q9UHW5 284 aaPredicted RBP5.33□□□□□ -1.56
USP44-208ENST00000552440 STRIP2Q9ULQ0 834 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 MRVI1Q9Y6F6 885 aa5.33□□□□□ -1.56
USP44-208ENST00000552440 DYNC1LI2O43237 492 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms