RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 SPTLC2O15270 562 aa12.52□□□□□ -0.4
PFDN5-216ENST00000552341 CYTH3O43739 400 aa12.52□□□□□ -0.4
PFDN5-216ENST00000552341 RAD17O75943 681 aa12.52□□□□□ -0.4
PFDN5-216ENST00000552341 TOP1P11387 765 aaKnown RBP12.52□□□□□ -0.4
PFDN5-216ENST00000552341 POLD1P28340 1107 aa12.52□□□□□ -0.4
PFDN5-216ENST00000552341 ME1P48163 572 aa12.52□□□□□ -0.4
PFDN5-216ENST00000552341 RBM5P52756 815 aaKnown RBP eCLIP12.52□□□□□ -0.4
PFDN5-216ENST00000552341 SF3A1Q15459 793 aaKnown RBP12.52□□□□□ -0.4
PFDN5-216ENST00000552341 PFKFB3Q16875 520 aaPredicted RBP12.52□□□□□ -0.4
PFDN5-216ENST00000552341 CFAP100Q494V2 611 aa12.52□□□□□ -0.4
PFDN5-216ENST00000552341 METTL16Q86W50 562 aaKnown RBP12.52□□□□□ -0.4
PFDN5-216ENST00000552341 BICD2Q8TD16 824 aa12.52□□□□□ -0.4
PFDN5-216ENST00000552341 DHX36Q9H2U1 1008 aaKnown RBP12.52□□□□□ -0.4
PFDN5-216ENST00000552341 DDX19AQ9NUU7 478 aaKnown RBP12.52□□□□□ -0.4
PFDN5-216ENST00000552341 A0A1W2PQ27 194 aa12.52□□□□□ -0.41
PFDN5-216ENST00000552341 A0A1W2PQ64 194 aa12.52□□□□□ -0.41
PFDN5-216ENST00000552341 A0A1W2PQD8 194 aa12.52□□□□□ -0.41
PFDN5-216ENST00000552341 SCG2P13521 617 aa12.52□□□□□ -0.41
PFDN5-216ENST00000552341 TCP10Q12799 353 aa12.52□□□□□ -0.41
PFDN5-216ENST00000552341 STK38Q15208 465 aa12.52□□□□□ -0.41
PFDN5-216ENST00000552341 SAFBQ15424 915 aaKnown RBP eCLIP12.52□□□□□ -0.41
PFDN5-216ENST00000552341 DALRD3Q5D0E6 543 aaKnown RBP12.52□□□□□ -0.41
PFDN5-216ENST00000552341 CCAR1Q8IX12 1150 aaKnown RBP12.52□□□□□ -0.41
PFDN5-216ENST00000552341 TNFRSF25Q93038 417 aa12.52□□□□□ -0.41
PFDN5-216ENST00000552341 CLSTN2Q9H4D0 955 aa12.52□□□□□ -0.41
PFDN5-216ENST00000552341 TDRD3Q9H7E2 651 aaKnown RBP12.52□□□□□ -0.41
PFDN5-216ENST00000552341 ATRNL1Q5VV63 1379 aa12.52□□□□□ -0.41
PFDN5-216ENST00000552341 COL2A1P02458 1487 aaPredicted RBP12.51□□□□□ -0.41
PFDN5-216ENST00000552341 HLA-DOAP06340 250 aa12.51□□□□□ -0.41
PFDN5-216ENST00000552341 PTGER2P43116 358 aa12.51□□□□□ -0.41
PFDN5-216ENST00000552341 GNAQP50148 359 aa12.51□□□□□ -0.41
PFDN5-216ENST00000552341 GNL2Q13823 731 aaKnown RBP12.51□□□□□ -0.41
PFDN5-216ENST00000552341 NUP62CLQ9H1M0 184 aa12.51□□□□□ -0.41
PFDN5-216ENST00000552341 TSPY26PQ9H489 355 aa12.51□□□□□ -0.41
PFDN5-216ENST00000552341 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.51□□□□□ -0.41
PFDN5-216ENST00000552341 ZNRF3Q9ULT6 936 aa12.51□□□□□ -0.41
PFDN5-216ENST00000552341 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 PPP6R2O75170 966 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 SNHG28P0DPA3 235 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 XBP1P17861 261 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 CAMK4Q16566 473 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 EARS2Q5JPH6 523 aaKnown RBP12.5□□□□□ -0.41
PFDN5-216ENST00000552341 UPF1Q92900 1129 aaKnown RBP eCLIP12.5□□□□□ -0.41
PFDN5-216ENST00000552341 PI4KBQ9UBF8 816 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-216ENST00000552341 UTRNP46939 3433 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 FAM205CA6NFA0 338 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 NFKBIEO00221 500 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 ENTPD3O75355 529 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 FAM160A1Q05DH4 1040 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 RILPL1Q5EBL4 403 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 TATDN1Q6P1N9 297 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 CLEC10AQ8IUN9 316 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 FMR1NBQ8N0W7 255 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-216ENST00000552341 SPZ1Q9BXG8 430 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 RRAGDQ9NQL2 400 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-216ENST00000552341 CD2APQ9Y5K6 639 aa12.5□□□□□ -0.41
PFDN5-216ENST00000552341 MYH4Q9Y623 1939 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 FAM196BA6NMK8 535 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 KLRF2D3W0D1 207 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 ADAMTS3O15072 1205 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 GOLGA8HP0CJ92 632 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 KRT2P35908 639 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 CXCL9Q07325 125 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 TYW1BQ6NUM6 668 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 USP17L2Q6R6M4 530 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 FSIP1Q8NA03 581 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 MRPS27Q92552 414 aaKnown RBP12.49□□□□□ -0.41
PFDN5-216ENST00000552341 CCDC17Q96LX7 622 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 LZTS2Q9BRK4 669 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 SH3GLB2Q9NR46 395 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 USP17L5A8MUK1 530 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 PDHBP11177 359 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 CMA1P23946 247 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 SMARCA1P28370 1054 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 MARCKSP29966 332 aaPredicted RBP12.49□□□□□ -0.41
PFDN5-216ENST00000552341 CLCN1P35523 988 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 MAP3K11Q16584 847 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 SHROOM1Q2M3G4 852 aaPredicted RBP12.49□□□□□ -0.41
PFDN5-216ENST00000552341 NOM1Q5C9Z4 860 aaKnown RBP12.49□□□□□ -0.41
PFDN5-216ENST00000552341 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 MTMR14Q8NCE2 650 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 TAOK3Q9H2K8 898 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 TNMDQ9H2S6 317 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 CPVLQ9H3G5 476 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 CABP5Q9NP86 173 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 PCDHB6Q9Y5E3 794 aa12.49□□□□□ -0.41
PFDN5-216ENST00000552341 FAM237AA0A1B0GTK4 181 aa12.48□□□□□ -0.41
PFDN5-216ENST00000552341 A0A1B0GVL5 298 aa12.48□□□□□ -0.41
PFDN5-216ENST00000552341 TTLL1O95922 423 aa12.48□□□□□ -0.41
PFDN5-216ENST00000552341 PARP1P09874 1014 aaKnown RBP12.48□□□□□ -0.41
PFDN5-216ENST00000552341 NDUFA8P51970 172 aa12.48□□□□□ -0.41
PFDN5-216ENST00000552341 FOXP4Q8IVH2 680 aaPredicted RBP12.48□□□□□ -0.41
PFDN5-216ENST00000552341 AGBL3Q8NEM8 1001 aa12.48□□□□□ -0.41
PFDN5-216ENST00000552341 PIBF1Q8WXW3 757 aa12.48□□□□□ -0.41
PFDN5-216ENST00000552341 ZBED3Q96IU2 234 aaPredicted RBP12.48□□□□□ -0.41
PFDN5-216ENST00000552341 CLIP2Q9UDT6 1046 aa12.48□□□□□ -0.41
PFDN5-216ENST00000552341 MTMR7Q9Y216 660 aa12.48□□□□□ -0.41
PFDN5-216ENST00000552341 M0R2N6 131 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms