RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 GINM1Q9NU53 330 aa15.5■□□□□ 0.07
SNRPF-204ENST00000552085 ABCF2Q9UG63 623 aa15.5■□□□□ 0.07
SNRPF-204ENST00000552085 APBB1O00213 710 aa15.49■□□□□ 0.07
SNRPF-204ENST00000552085 ST18O60284 1047 aa15.49■□□□□ 0.07
SNRPF-204ENST00000552085 MAP4K4O95819 1239 aaPredicted RBP15.49■□□□□ 0.07
SNRPF-204ENST00000552085 RABGGTBP53611 331 aa15.49■□□□□ 0.07
SNRPF-204ENST00000552085 SHROOM1Q2M3G4 852 aaPredicted RBP15.49■□□□□ 0.07
SNRPF-204ENST00000552085 CATSPERGQ6ZRH7 1159 aa15.49■□□□□ 0.07
SNRPF-204ENST00000552085 C12orf42Q96LP6 360 aa15.49■□□□□ 0.07
SNRPF-204ENST00000552085 PI4KBQ9UBF8 816 aa15.49■□□□□ 0.07
SNRPF-204ENST00000552085 MROH7Q68CQ1 1323 aa15.48■□□□□ 0.07
SNRPF-204ENST00000552085 RFXAPO00287 272 aa15.48■□□□□ 0.07
SNRPF-204ENST00000552085 COBLO75128 1261 aa15.48■□□□□ 0.07
SNRPF-204ENST00000552085 PHKA1P46020 1223 aa15.48■□□□□ 0.07
SNRPF-204ENST00000552085 ACLYP53396 1101 aa15.48■□□□□ 0.07
SNRPF-204ENST00000552085 SPTY2D1Q68D10 685 aaPredicted RBP15.48■□□□□ 0.07
SNRPF-204ENST00000552085 NUP133Q8WUM0 1156 aa15.48■□□□□ 0.07
SNRPF-204ENST00000552085 TSEN34Q9BSV6 310 aaKnown RBP15.48■□□□□ 0.07
SNRPF-204ENST00000552085 IL23AQ9NPF7 189 aa15.48■□□□□ 0.07
SNRPF-204ENST00000552085 SLC5A4Q9NY91 659 aa15.48■□□□□ 0.07
SNRPF-204ENST00000552085 ZBTB21Q9ULJ3 1066 aa15.48■□□□□ 0.07
SNRPF-204ENST00000552085 PCDHA11Q9Y5I1 949 aa15.48■□□□□ 0.07
SNRPF-204ENST00000552085 EYA2O00167 538 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 ZBTB22O15209 634 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 GDF11O95390 407 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 FGBP02675 491 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 ALADP13716 330 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 MYOGP15173 224 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 ZYXQ15942 572 aaKnown RBP15.47■□□□□ 0.07
SNRPF-204ENST00000552085 ATP2B3Q16720 1220 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 SLC4A10Q6U841 1118 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 PPP1R12CQ9BZL4 782 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 NRBP1Q9UHY1 535 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 FOCADQ5VW36 1801 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 TRANK1O15050 2925 aa15.47■□□□□ 0.07
SNRPF-204ENST00000552085 ZNF318Q5VUA4 2279 aa15.46■□□□□ 0.07
SNRPF-204ENST00000552085 MECOMQ03112 1051 aa15.46■□□□□ 0.07
SNRPF-204ENST00000552085 KRT40Q6A162 431 aa15.46■□□□□ 0.07
SNRPF-204ENST00000552085 MAML3Q96JK9 1138 aa15.46■□□□□ 0.07
SNRPF-204ENST00000552085 DNAJC18Q9H819 358 aa15.46■□□□□ 0.07
SNRPF-204ENST00000552085 MOXD2PA6NHM9 499 aa15.45■□□□□ 0.06
SNRPF-204ENST00000552085 SPDYE16A6NNV3 312 aaPredicted RBP15.45■□□□□ 0.06
SNRPF-204ENST00000552085 VAMP4O75379 141 aa15.45■□□□□ 0.06
SNRPF-204ENST00000552085 OTOP2Q7RTS6 562 aa15.45■□□□□ 0.06
SNRPF-204ENST00000552085 GJD3Q8N144 294 aa15.45■□□□□ 0.06
SNRPF-204ENST00000552085 ZNF384Q8TF68 577 aa15.45■□□□□ 0.06
SNRPF-204ENST00000552085 PHOX2BQ99453 314 aa15.45■□□□□ 0.06
SNRPF-204ENST00000552085 FEZ1Q99689 392 aa15.45■□□□□ 0.06
SNRPF-204ENST00000552085 MOV10L1Q9BXT6 1211 aaKnown RBP15.45■□□□□ 0.06
SNRPF-204ENST00000552085 DHX36Q9H2U1 1008 aaKnown RBP15.45■□□□□ 0.06
SNRPF-204ENST00000552085 ROBO3Q96MS0 1386 aa15.45■□□□□ 0.06
SNRPF-204ENST00000552085 PDS5AQ29RF7 1337 aaKnown RBP15.44■□□□□ 0.06
SNRPF-204ENST00000552085 ADAMTS4O75173 837 aa15.44■□□□□ 0.06
SNRPF-204ENST00000552085 CDK7P50613 346 aa15.44■□□□□ 0.06
SNRPF-204ENST00000552085 ERICH6Q7L0X2 663 aa15.44■□□□□ 0.06
SNRPF-204ENST00000552085 METTL16Q86W50 562 aaKnown RBP15.44■□□□□ 0.06
SNRPF-204ENST00000552085 TEX11Q8IYF3 940 aa15.44■□□□□ 0.06
SNRPF-204ENST00000552085 SHCBP1Q8NEM2 672 aa15.44■□□□□ 0.06
SNRPF-204ENST00000552085 TRIM34Q9BYJ4 488 aa15.44■□□□□ 0.06
SNRPF-204ENST00000552085 LDHCP07864 332 aa15.43■□□□□ 0.06
SNRPF-204ENST00000552085 VCAM1P19320 739 aa15.43■□□□□ 0.06
SNRPF-204ENST00000552085 ERCC3P19447 782 aa15.43■□□□□ 0.06
SNRPF-204ENST00000552085 CYP2C18P33260 490 aa15.43■□□□□ 0.06
SNRPF-204ENST00000552085 RASGRF1Q13972 1273 aa15.43■□□□□ 0.06
SNRPF-204ENST00000552085 CCDC102BQ68D86 513 aa15.43■□□□□ 0.06
SNRPF-204ENST00000552085 ATG9AQ7Z3C6 839 aa15.43■□□□□ 0.06
SNRPF-204ENST00000552085 FOXP4Q8IVH2 680 aaPredicted RBP15.43■□□□□ 0.06
SNRPF-204ENST00000552085 FAM178BQ8IXR5 827 aa15.43■□□□□ 0.06
SNRPF-204ENST00000552085 ABRAQ8N0Z2 381 aa15.43■□□□□ 0.06
SNRPF-204ENST00000552085 CRACR2BQ8N4Y2 399 aaPredicted RBP15.43■□□□□ 0.06
SNRPF-204ENST00000552085 SLC4A7Q9Y6M7 1214 aa15.43■□□□□ 0.06
SNRPF-204ENST00000552085 COL4A4P53420 1690 aaPredicted RBP15.43■□□□□ 0.06
SNRPF-204ENST00000552085 ELP1O95163 1332 aa15.43■□□□□ 0.06
SNRPF-204ENST00000552085 BRWD1Q9NSI6 2320 aa15.42■□□□□ 0.06
SNRPF-204ENST00000552085 EPOPA6NHQ4 379 aa15.42■□□□□ 0.06
SNRPF-204ENST00000552085 TLR3O15455 904 aaKnown RBP15.42■□□□□ 0.06
SNRPF-204ENST00000552085 AKR1A1P14550 325 aa15.42■□□□□ 0.06
SNRPF-204ENST00000552085 SSTR3P32745 418 aaPredicted RBP15.42■□□□□ 0.06
SNRPF-204ENST00000552085 RFX5P48382 616 aaPredicted RBP15.42■□□□□ 0.06
SNRPF-204ENST00000552085 USP14P54578 494 aa15.42■□□□□ 0.06
SNRPF-204ENST00000552085 GSTO1P78417 241 aa15.42■□□□□ 0.06
SNRPF-204ENST00000552085 KCNA10Q16322 511 aa15.42■□□□□ 0.06
SNRPF-204ENST00000552085 LENG1Q96BZ8 264 aaPredicted RBP15.42■□□□□ 0.06
SNRPF-204ENST00000552085 GLT1D1Q96MS3 346 aa15.42■□□□□ 0.06
SNRPF-204ENST00000552085 SPATC1LQ9H0A9 340 aa15.42■□□□□ 0.06
SNRPF-204ENST00000552085 CERS4Q9HA82 394 aa15.42■□□□□ 0.06
SNRPF-204ENST00000552085 WDFY4Q6ZS81 3184 aa15.42■□□□□ 0.06
SNRPF-204ENST00000552085 SYNRGQ9UMZ2 1314 aa15.42■□□□□ 0.06
SNRPF-204ENST00000552085 GH2P01242 217 aa15.41■□□□□ 0.06
SNRPF-204ENST00000552085 CCSAPQ6IQ19 270 aaPredicted RBP15.41■□□□□ 0.06
SNRPF-204ENST00000552085 FAM126BQ8IXS8 530 aa15.41■□□□□ 0.06
SNRPF-204ENST00000552085 KLHDC9Q8NEP7 349 aa15.41■□□□□ 0.06
SNRPF-204ENST00000552085 KIAA1683Q9H0B3 1180 aa15.41■□□□□ 0.06
SNRPF-204ENST00000552085 RPAP3Q9H6T3 665 aaPredicted RBP15.41■□□□□ 0.06
SNRPF-204ENST00000552085 CEP126Q9P2H0 1117 aa15.41■□□□□ 0.06
SNRPF-204ENST00000552085 ARVCFO00192 962 aa15.4■□□□□ 0.06
SNRPF-204ENST00000552085 CA3P07451 260 aa15.4■□□□□ 0.06
SNRPF-204ENST00000552085 ATP2A2P16615 1042 aaKnown RBP15.4■□□□□ 0.06
SNRPF-204ENST00000552085 TAL1P17542 331 aaPredicted RBP15.4■□□□□ 0.06
SNRPF-204ENST00000552085 TMEM67Q5HYA8 995 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms