RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ABCB5Q2M3G0 1257 aa18.72■□□□□ 0.59
CACNB3-220ENST00000551716 CERKLQ49MI3 558 aaPredicted RBP18.72■□□□□ 0.59
CACNB3-220ENST00000551716 TTC6Q86TZ1 520 aa18.72■□□□□ 0.59
CACNB3-220ENST00000551716 MB21D1Q8N884 522 aa18.72■□□□□ 0.59
CACNB3-220ENST00000551716 ADAMTS19Q8TE59 1207 aa18.72■□□□□ 0.59
CACNB3-220ENST00000551716 TOX2Q96NM4 488 aa18.72■□□□□ 0.59
CACNB3-220ENST00000551716 EHD4Q9H223 541 aa18.72■□□□□ 0.59
CACNB3-220ENST00000551716 FRMPD3Q5JV73 1810 aa18.72■□□□□ 0.59
CACNB3-220ENST00000551716 RLFQ13129 1914 aa18.71■□□□□ 0.59
CACNB3-220ENST00000551716 DCDC2CA8MYV0 355 aa18.71■□□□□ 0.59
CACNB3-220ENST00000551716 G3BP1Q13283 466 aaKnown RBP eCLIP18.71■□□□□ 0.59
CACNB3-220ENST00000551716 CCDC158Q5M9N0 1113 aa18.71■□□□□ 0.59
CACNB3-220ENST00000551716 C1QTNF1Q9BXJ1 281 aa18.71■□□□□ 0.59
CACNB3-220ENST00000551716 SPATC1LQ9H0A9 340 aa18.71■□□□□ 0.59
CACNB3-220ENST00000551716 XPNPEP3Q9NQH7 507 aa18.71■□□□□ 0.59
CACNB3-220ENST00000551716 COBLO75128 1261 aa18.7■□□□□ 0.58
CACNB3-220ENST00000551716 ERCC3P19447 782 aa18.7■□□□□ 0.58
CACNB3-220ENST00000551716 MAP3K12Q12852 859 aa18.7■□□□□ 0.58
CACNB3-220ENST00000551716 PRAMEF19Q5SWL8 479 aa18.7■□□□□ 0.58
CACNB3-220ENST00000551716 UHRF1Q96T88 793 aaPredicted RBP18.7■□□□□ 0.58
CACNB3-220ENST00000551716 RAPGEFL1Q9UHV5 662 aa18.7■□□□□ 0.58
CACNB3-220ENST00000551716 NCOR1O75376 2440 aa18.69■□□□□ 0.58
CACNB3-220ENST00000551716 ANP32CO43423 234 aa18.69■□□□□ 0.58
CACNB3-220ENST00000551716 PQBP1O60828 265 aaKnown RBP18.69■□□□□ 0.58
CACNB3-220ENST00000551716 FAM47AQ5JRC9 791 aa18.69■□□□□ 0.58
CACNB3-220ENST00000551716 TTC39AQ5SRH9 613 aa18.69■□□□□ 0.58
CACNB3-220ENST00000551716 ANKRD33Q7Z3H0 272 aa18.69■□□□□ 0.58
CACNB3-220ENST00000551716 ADGRA1Q86SQ6 560 aa18.69■□□□□ 0.58
CACNB3-220ENST00000551716 FAM9BQ8IZU0 186 aa18.69■□□□□ 0.58
CACNB3-220ENST00000551716 SLC44A5Q8NCS7 719 aa18.69■□□□□ 0.58
CACNB3-220ENST00000551716 ACER1Q8TDN7 264 aa18.69■□□□□ 0.58
CACNB3-220ENST00000551716 PPM1EQ8WY54 764 aa18.69■□□□□ 0.58
CACNB3-220ENST00000551716 MEIS3Q99687 375 aa18.69■□□□□ 0.58
CACNB3-220ENST00000551716 TSEN34Q9BSV6 310 aaKnown RBP18.69■□□□□ 0.58
CACNB3-220ENST00000551716 TSPYL2Q9H2G4 693 aaPredicted RBP18.69■□□□□ 0.58
CACNB3-220ENST00000551716 ARIH1Q9Y4X5 557 aaPredicted RBP18.69■□□□□ 0.58
CACNB3-220ENST00000551716 FCER1AP12319 257 aa18.68■□□□□ 0.58
CACNB3-220ENST00000551716 USP5P45974 858 aa18.68■□□□□ 0.58
CACNB3-220ENST00000551716 NUP133Q8WUM0 1156 aa18.68■□□□□ 0.58
CACNB3-220ENST00000551716 MAML3Q96JK9 1138 aa18.68■□□□□ 0.58
CACNB3-220ENST00000551716 SNRKQ9NRH2 765 aa18.68■□□□□ 0.58
CACNB3-220ENST00000551716 NOB1Q9ULX3 412 aaKnown RBP18.68■□□□□ 0.58
CACNB3-220ENST00000551716 TIMP1P01033 207 aa18.67■□□□□ 0.58
CACNB3-220ENST00000551716 TMED8Q6PL24 325 aaPredicted RBP18.67■□□□□ 0.58
CACNB3-220ENST00000551716 CCDC129Q6ZRS4 1044 aa18.67■□□□□ 0.58
CACNB3-220ENST00000551716 NCAPG2Q86XI2 1143 aa18.67■□□□□ 0.58
CACNB3-220ENST00000551716 ZNF512BQ96KM6 892 aaPredicted RBP18.67■□□□□ 0.58
CACNB3-220ENST00000551716 TANGO6Q9C0B7 1094 aa18.67■□□□□ 0.58
CACNB3-220ENST00000551716 GPR108Q9NPR9 543 aa18.67■□□□□ 0.58
CACNB3-220ENST00000551716 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.67■□□□□ 0.58
CACNB3-220ENST00000551716 SIPA1L1O43166 1804 aa18.66■□□□□ 0.58
CACNB3-220ENST00000551716 A0A1W2PQ45 241 aaPredicted RBP18.66■□□□□ 0.58
CACNB3-220ENST00000551716 A0A1W2PQY0 241 aa18.66■□□□□ 0.58
CACNB3-220ENST00000551716 CYP2E1P05181 493 aaPredicted RBP18.66■□□□□ 0.58
CACNB3-220ENST00000551716 CT47B1P0C2W7 299 aaPredicted RBP18.66■□□□□ 0.58
CACNB3-220ENST00000551716 HOXD11P31277 338 aaPredicted RBP18.66■□□□□ 0.58
CACNB3-220ENST00000551716 FAAP100Q0VG06 881 aa18.66■□□□□ 0.58
CACNB3-220ENST00000551716 PPIGQ13427 754 aaKnown RBP eCLIP18.66■□□□□ 0.58
CACNB3-220ENST00000551716 SLC25A27O95847 323 aa18.65■□□□□ 0.58
CACNB3-220ENST00000551716 CYP7A1P22680 504 aa18.65■□□□□ 0.58
CACNB3-220ENST00000551716 DYNLL1P63167 89 aaKnown RBP18.65■□□□□ 0.58
CACNB3-220ENST00000551716 SLFN5Q08AF3 891 aa18.65■□□□□ 0.58
CACNB3-220ENST00000551716 PLS1Q14651 629 aa18.65■□□□□ 0.58
CACNB3-220ENST00000551716 MFSD5Q6N075 450 aa18.65■□□□□ 0.58
CACNB3-220ENST00000551716 PRDM12Q9H4Q4 367 aa18.65■□□□□ 0.58
CACNB3-220ENST00000551716 STARD7Q9NQZ5 370 aa18.65■□□□□ 0.58
CACNB3-220ENST00000551716 MSRAQ9UJ68 235 aa18.65■□□□□ 0.58
CACNB3-220ENST00000551716 DIS3Q9Y2L1 958 aaKnown RBP18.65■□□□□ 0.58
CACNB3-220ENST00000551716 MROH7Q68CQ1 1323 aa18.65■□□□□ 0.58
CACNB3-220ENST00000551716 BDP1A6H8Y1 2624 aa18.64■□□□□ 0.57
CACNB3-220ENST00000551716 PGK1P00558 417 aa18.64■□□□□ 0.57
CACNB3-220ENST00000551716 AKR1A1P14550 325 aa18.64■□□□□ 0.57
CACNB3-220ENST00000551716 DSG3P32926 999 aa18.64■□□□□ 0.57
CACNB3-220ENST00000551716 RAB30Q15771 203 aa18.64■□□□□ 0.57
CACNB3-220ENST00000551716 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.64■□□□□ 0.57
CACNB3-220ENST00000551716 TINF2Q9BSI4 451 aa18.64■□□□□ 0.57
CACNB3-220ENST00000551716 PBX4Q9BYU1 374 aa18.64■□□□□ 0.57
CACNB3-220ENST00000551716 MOXD2PA6NHM9 499 aa18.63■□□□□ 0.57
CACNB3-220ENST00000551716 AAK1Q2M2I8 961 aa18.63■□□□□ 0.57
CACNB3-220ENST00000551716 RASIP1Q5U651 963 aa18.63■□□□□ 0.57
CACNB3-220ENST00000551716 TMEM199Q8N511 208 aa18.63■□□□□ 0.57
CACNB3-220ENST00000551716 CNPY2Q9Y2B0 182 aa18.63■□□□□ 0.57
CACNB3-220ENST00000551716 ZNF236Q9UL36 1845 aa18.63■□□□□ 0.57
CACNB3-220ENST00000551716 IGFBP4P22692 258 aa18.62■□□□□ 0.57
CACNB3-220ENST00000551716 SHMT1P34896 483 aa18.62■□□□□ 0.57
CACNB3-220ENST00000551716 ACLYP53396 1101 aa18.62■□□□□ 0.57
CACNB3-220ENST00000551716 KCTD2Q14681 263 aa18.62■□□□□ 0.57
CACNB3-220ENST00000551716 SEPT2Q15019 361 aa18.62■□□□□ 0.57
CACNB3-220ENST00000551716 TMEM240Q5SV17 173 aa18.62■□□□□ 0.57
CACNB3-220ENST00000551716 PSRC1Q6PGN9 363 aaPredicted RBP18.62■□□□□ 0.57
CACNB3-220ENST00000551716 ARHGAP45Q92619 1136 aa18.62■□□□□ 0.57
CACNB3-220ENST00000551716 MTIF3Q9H2K0 278 aaKnown RBP18.62■□□□□ 0.57
CACNB3-220ENST00000551716 TBX21Q9UL17 535 aa18.62■□□□□ 0.57
CACNB3-220ENST00000551716 ROBO3Q96MS0 1386 aa18.61■□□□□ 0.57
CACNB3-220ENST00000551716 ELP1O95163 1332 aa18.61■□□□□ 0.57
CACNB3-220ENST00000551716 FLOT1O75955 427 aa18.61■□□□□ 0.57
CACNB3-220ENST00000551716 GNAI2P04899 355 aa18.61■□□□□ 0.57
CACNB3-220ENST00000551716 POLR3DP05423 398 aaPredicted RBP18.61■□□□□ 0.57
CACNB3-220ENST00000551716 GUCY1A2P33402 732 aa18.61■□□□□ 0.57
CACNB3-220ENST00000551716 ZAP70P43403 619 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms