RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 GAS2L1Q99501 681 aaPredicted RBP12.55□□□□□ -0.4
BEST3-210ENST00000551160 XPNPEP3Q9NQH7 507 aa12.55□□□□□ -0.4
BEST3-210ENST00000551160 SMC4Q9NTJ3 1288 aa12.55□□□□□ -0.4
BEST3-210ENST00000551160 TMEM39AQ9NV64 488 aa12.55□□□□□ -0.4
BEST3-210ENST00000551160 BDP1A6H8Y1 2624 aa12.54□□□□□ -0.4
BEST3-210ENST00000551160 A0A1W2PQ45 241 aaPredicted RBP12.54□□□□□ -0.4
BEST3-210ENST00000551160 A0A1W2PQY0 241 aa12.54□□□□□ -0.4
BEST3-210ENST00000551160 MRPS5P82675 430 aaKnown RBP12.54□□□□□ -0.4
BEST3-210ENST00000551160 CCDC85BQ15834 202 aaPredicted RBP12.54□□□□□ -0.4
BEST3-210ENST00000551160 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
BEST3-210ENST00000551160 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.54□□□□□ -0.4
BEST3-210ENST00000551160 PBX4Q9BYU1 374 aa12.54□□□□□ -0.4
BEST3-210ENST00000551160 SPATC1LQ9H0A9 340 aa12.54□□□□□ -0.4
BEST3-210ENST00000551160 STRNO43815 780 aa12.53□□□□□ -0.4
BEST3-210ENST00000551160 UQCRFS1P1P0C7P4 283 aa12.53□□□□□ -0.4
BEST3-210ENST00000551160 RARBP10826 455 aa12.53□□□□□ -0.4
BEST3-210ENST00000551160 GUCY1A2P33402 732 aa12.53□□□□□ -0.4
BEST3-210ENST00000551160 FAAP100Q0VG06 881 aa12.53□□□□□ -0.4
BEST3-210ENST00000551160 ABCB5Q2M3G0 1257 aa12.53□□□□□ -0.4
BEST3-210ENST00000551160 SHCBP1Q8NEM2 672 aa12.53□□□□□ -0.4
BEST3-210ENST00000551160 MAML3Q96JK9 1138 aa12.53□□□□□ -0.4
BEST3-210ENST00000551160 CYP2E1P05181 493 aaPredicted RBP12.52□□□□□ -0.41
BEST3-210ENST00000551160 TAL1P17542 331 aaPredicted RBP12.52□□□□□ -0.41
BEST3-210ENST00000551160 CERKLQ49MI3 558 aaPredicted RBP12.52□□□□□ -0.41
BEST3-210ENST00000551160 CCDC129Q6ZRS4 1044 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 C16orf59Q7L2K0 433 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 ANKRD33Q7Z3H0 272 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 RNF180Q86T96 592 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 NCAPG2Q86XI2 1143 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 FAM9BQ8IZU0 186 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 MIGA1Q8NAN2 632 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 SLC44A5Q8NCS7 719 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 IL27Q8NEV9 243 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 TANGO6Q9C0B7 1094 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 PIH1D3Q9NQM4 214 aaKnown RBP12.52□□□□□ -0.41
BEST3-210ENST00000551160 SERPINB13Q9UIV8 391 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 NOB1Q9ULX3 412 aaKnown RBP12.52□□□□□ -0.41
BEST3-210ENST00000551160 HDAC5Q9UQL6 1122 aa12.52□□□□□ -0.41
BEST3-210ENST00000551160 ZNF236Q9UL36 1845 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 A0A1W2PRG0 241 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 TIMP1P01033 207 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 CYP7A1P22680 504 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 IGFBP4P22692 258 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 SHMT1P34896 483 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 MTX1Q13505 466 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 PLS1Q14651 629 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 COG2Q14746 738 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 SEPT2Q15019 361 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 ALDH1L2Q3SY69 923 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 KIAA1755Q5JYT7 1200 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 TTC39AQ5SRH9 613 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 TMEM240Q5SV17 173 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 EHD4Q9H223 541 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 SLC5A4Q9NY91 659 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 TBX21Q9UL17 535 aa12.51□□□□□ -0.41
BEST3-210ENST00000551160 E9PSI1 815 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 PGK2P07205 417 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 ZAP70P43403 619 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 USP5P45974 858 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 RASIP1Q5U651 963 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 ABRAQ8N0Z2 381 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 ATG4CQ96DT6 458 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 CDCA7LQ96GN5 454 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 TOX2Q96NM4 488 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 DBNDD2Q9BQY9 259 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 MROH8Q9H579 483 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 CABP5Q9NP86 173 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 HOXC10Q9NYD6 342 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 ROBO3Q96MS0 1386 aa12.5□□□□□ -0.41
BEST3-210ENST00000551160 PIEZO1Q92508 2521 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 DCDC2CA8MYV0 355 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 ADAMTS4O75173 837 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 ACRP10323 421 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 CSF2RAP15509 400 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 PLCD1P51178 756 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 ACLYP53396 1101 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 TFF2Q03403 129 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 EVX2Q03828 476 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 PPIGQ13427 754 aaKnown RBP eCLIP12.49□□□□□ -0.41
BEST3-210ENST00000551160 MFSD5Q6N075 450 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
BEST3-210ENST00000551160 C1QTNF1Q9BXJ1 281 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 API5Q9BZZ5 524 aaKnown RBP12.49□□□□□ -0.41
BEST3-210ENST00000551160 NKX2-4Q9H2Z4 354 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 STARD7Q9NQZ5 370 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 NRBP1Q9UHY1 535 aa12.49□□□□□ -0.41
BEST3-210ENST00000551160 SYNRGQ9UMZ2 1314 aa12.48□□□□□ -0.41
BEST3-210ENST00000551160 PNMA6EA0A0J9YXQ4 647 aa12.48□□□□□ -0.41
BEST3-210ENST00000551160 MYADML2A6NDP7 307 aa12.48□□□□□ -0.41
BEST3-210ENST00000551160 ZNF865P0CJ78 1059 aaPredicted RBP12.48□□□□□ -0.41
BEST3-210ENST00000551160 FCER1AP12319 257 aa12.48□□□□□ -0.41
BEST3-210ENST00000551160 BMP1P13497 986 aa12.48□□□□□ -0.41
BEST3-210ENST00000551160 DSG3P32926 999 aa12.48□□□□□ -0.41
BEST3-210ENST00000551160 SLFN5Q08AF3 891 aa12.48□□□□□ -0.41
BEST3-210ENST00000551160 G3BP1Q13283 466 aaKnown RBP eCLIP12.48□□□□□ -0.41
BEST3-210ENST00000551160 ZNF365Q70YC5 407 aa12.48□□□□□ -0.41
BEST3-210ENST00000551160 MICALL1Q8N3F8 863 aa12.48□□□□□ -0.41
BEST3-210ENST00000551160 MB21D1Q8N884 522 aa12.48□□□□□ -0.41
BEST3-210ENST00000551160 MMP19Q99542 508 aa12.48□□□□□ -0.41
BEST3-210ENST00000551160 CXXC1Q9P0U4 656 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms