RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.21	□□□□□ -0.61
TUBA1A-208	ENST00000550811	CCDC17	Q96LX7	622 aa		11.21	□□□□□ -0.61
TUBA1A-208	ENST00000550811	WRNIP1	Q96S55	665 aa		11.21	□□□□□ -0.61
TUBA1A-208	ENST00000550811	KIF2C	Q99661	725 aa		11.21	□□□□□ -0.61
TUBA1A-208	ENST00000550811	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.21	□□□□□ -0.61
TUBA1A-208	ENST00000550811	CYP46A1	Q9Y6A2	500 aa		11.21	□□□□□ -0.61
TUBA1A-208	ENST00000550811	MYH4	Q9Y623	1939 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	MPHOSPH10	O00566	681 aa	Known RBP	11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ATMIN	O43313	823 aa	Predicted RBP	11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PPP1R12B	O60237	982 aa	Predicted RBP	11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	GDF11	O95390	407 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	AKR1B1	P15121	316 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	RPS6KB1	P23443	525 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	MCM5	P33992	734 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	IREB2	P48200	963 aa	Known RBP	11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ABCB5	Q2M3G0	1257 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	FAM47A	Q5JRC9	791 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	RUFY3	Q7L099	469 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	IQCA1	Q86XH1	822 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	SLAIN1	Q8ND83	568 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	RBM46	Q8TBY0	533 aa	Known RBP	11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	UBAC1	Q9BSL1	405 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	UPF3B	Q9BZI7	483 aa	Known RBP	11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ZNF408	Q9H9D4	720 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ZSWIM6	Q9HCJ5	1215 aa		11.2	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PHF20L1	A8MW92	1017 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PRC1	O43663	620 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TOMM70	O94826	608 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CPA1	P15085	419 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ANTXR2	P58335	489 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TFAP4	Q01664	338 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PRKG1	Q13976	671 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	COL9A3	Q14050	684 aa	Predicted RBP	11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	SART3	Q15020	963 aa	Known RBP	11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ASTL	Q6HA08	431 aa	Predicted RBP	11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TYW1B	Q6NUM6	668 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TMEM179	Q6ZVK1	233 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CYB5R4	Q7L1T6	521 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	DHX32	Q7L7V1	743 aa	Known RBP	11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ARMC9	Q7Z3E5	817 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	NEDD1	Q8NHV4	660 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	NKX2-3	Q8TAU0	364 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	KLRG1	Q96E93	195 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CABP5	Q9NP86	173 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ZSWIM5	Q9P217	1185 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	METRN	Q9UJH8	293 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ZNF112	Q9UJU3	913 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ZBTB21	Q9ULJ3	1066 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	FZD1	Q9UP38	647 aa		11.19	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TNKS	O95271	1327 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ERICH2	A1L162	156 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CTNND1	O60716	968 aa	Known RBP	11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CELF2	O95319	508 aa	Known RBP	11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ITGBL1	O95965	494 aa	Predicted RBP	11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	GH2	P01242	217 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ASNS	P08243	561 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CAP2	P40123	477 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CLK2	P49760	499 aa	Known RBP	11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	FKBP1B	P68106	108 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	FMR1	Q06787	632 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	RRP1B	Q14684	758 aa	Known RBP	11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	MAP3K11	Q16584	847 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CCDC178	Q5BJE1	867 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PPP4R3B	Q5MIZ7	849 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	NOL9	Q5SY16	702 aa	Known RBP	11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CHST3	Q7LGC8	479 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TMEM87B	Q96K49	555 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TCEANC2	Q96MN5	208 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	MTA3	Q9BTC8	594 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	GBA2	Q9HCG7	927 aa	Predicted RBP	11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	SCUBE2	Q9NQ36	999 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	GINM1	Q9NU53	330 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TCP11L1	Q9NUJ3	509 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	POLR3E	Q9NVU0	708 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ANGEL1	Q9UNK9	670 aa	Known RBP	11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CSAD	Q9Y600	493 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PHIP	Q8WWQ0	1821 aa		11.18	□□□□□ -0.62
TUBA1A-208	ENST00000550811	PASK	Q96RG2	1323 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	IGKV6D-41	A0A0C4DH26	115 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	SH2B2	O14492	632 aa	Predicted RBP	11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	IFIT3	O14879	490 aa	Known RBP	11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ST18	O60284	1047 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	NMT2	O60551	498 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	USP2	O75604	605 aa	Predicted RBP	11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	INPP5B	P32019	993 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	NEK4	P51957	841 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	FGD1	P98174	961 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	EXOSC10	Q01780	885 aa	Known RBP	11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	ICA1	Q05084	483 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	FSTL1	Q12841	308 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	VGLL4	Q14135	290 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	SEPT2	Q15019	361 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	RAB3GAP1	Q15042	981 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	TMEM67	Q5HYA8	995 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	SCYL3	Q8IZE3	742 aa		11.17	□□□□□ -0.62
TUBA1A-208	ENST00000550811	CEP95	Q96GE4	821 aa		11.17	□□□□□ -0.62

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