RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 GH2P01242 217 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 HSP90AA1P07900 732 aaKnown RBP16.5■□□□□ 0.23
CACNB3-216ENST00000550391 RCAN1P53805 252 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 ST3GAL1Q11201 340 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 SEPT2Q15019 361 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 CATIPQ7Z7H3 387 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 ZNF654Q8IZM8 581 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 TMEM47Q9BQJ4 181 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 KAT14Q9H8E8 782 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 KANSL2Q9H9L4 492 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 GINM1Q9NU53 330 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 ZBTB21Q9ULJ3 1066 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 STX8Q9UNK0 236 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 HPS5Q9UPZ3 1129 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 PAPPA2Q9BXP8 1791 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 DOCK1Q14185 1865 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 NID2Q14112 1375 aa16.5■□□□□ 0.23
CACNB3-216ENST00000550391 CTNND1O60716 968 aaKnown RBP16.49■□□□□ 0.23
CACNB3-216ENST00000550391 TTLL1O95922 423 aa16.49■□□□□ 0.23
CACNB3-216ENST00000550391 TOP1P11387 765 aaKnown RBP16.49■□□□□ 0.23
CACNB3-216ENST00000550391 SCRN1Q12765 414 aa16.49■□□□□ 0.23
CACNB3-216ENST00000550391 STK3Q13188 491 aa16.49■□□□□ 0.23
CACNB3-216ENST00000550391 CLEC10AQ8IUN9 316 aa16.49■□□□□ 0.23
CACNB3-216ENST00000550391 NECAB1Q8N987 351 aa16.49■□□□□ 0.23
CACNB3-216ENST00000550391 GTF3C6Q969F1 213 aa16.49■□□□□ 0.23
CACNB3-216ENST00000550391 INTS4Q96HW7 963 aaKnown RBP16.49■□□□□ 0.23
CACNB3-216ENST00000550391 NYAP2Q9P242 653 aa16.49■□□□□ 0.23
CACNB3-216ENST00000550391 MYH4Q9Y623 1939 aa16.49■□□□□ 0.23
CACNB3-216ENST00000550391 USP2O75604 605 aaPredicted RBP16.48■□□□□ 0.23
CACNB3-216ENST00000550391 DDAH1O94760 285 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 CALM1P0DP23 149 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 CALM2P0DP24 149 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 CALM3P0DP25 149 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 NF2P35240 595 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 TROAPQ12815 778 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 SIAH1Q8IUQ4 282 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 PNMA1Q8ND90 353 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 MKL1Q969V6 931 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 MYL10Q9BUA6 226 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 CLIP2Q9UDT6 1046 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 FZD1Q9UP38 647 aa16.48■□□□□ 0.23
CACNB3-216ENST00000550391 DHX16O60231 1041 aaKnown RBP16.47■□□□□ 0.23
CACNB3-216ENST00000550391 ASNSP08243 561 aa16.47■□□□□ 0.23
CACNB3-216ENST00000550391 EEF2P13639 858 aaKnown RBP16.47■□□□□ 0.23
CACNB3-216ENST00000550391 INPP5BP32019 993 aa16.47■□□□□ 0.23
CACNB3-216ENST00000550391 METAP2P50579 478 aaKnown RBP eCLIP16.47■□□□□ 0.23
CACNB3-216ENST00000550391 CCT2P78371 535 aaKnown RBP16.47■□□□□ 0.23
CACNB3-216ENST00000550391 ICA1Q05084 483 aa16.47■□□□□ 0.23
CACNB3-216ENST00000550391 RAB3GAP1Q15042 981 aa16.47■□□□□ 0.23
CACNB3-216ENST00000550391 PPP2R5BQ15173 497 aa16.47■□□□□ 0.23
CACNB3-216ENST00000550391 MICU3Q86XE3 530 aa16.47■□□□□ 0.23
CACNB3-216ENST00000550391 RAB11FIP4Q86YS3 637 aa16.47■□□□□ 0.23
CACNB3-216ENST00000550391 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.47■□□□□ 0.23
CACNB3-216ENST00000550391 WRNIP1Q96S55 665 aa16.47■□□□□ 0.23
CACNB3-216ENST00000550391 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.47■□□□□ 0.23
CACNB3-216ENST00000550391 OTOFQ9HC10 1997 aa16.46■□□□□ 0.23
CACNB3-216ENST00000550391 GOLGA8AA7E2F4 631 aa16.46■□□□□ 0.23
CACNB3-216ENST00000550391 PPP1R12BO60237 982 aaPredicted RBP16.46■□□□□ 0.23
CACNB3-216ENST00000550391 RXRAP19793 462 aa16.46■□□□□ 0.23
CACNB3-216ENST00000550391 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.23
CACNB3-216ENST00000550391 SCYL3Q8IZE3 742 aa16.46■□□□□ 0.23
CACNB3-216ENST00000550391 FANCBQ8NB91 859 aa16.46■□□□□ 0.23
CACNB3-216ENST00000550391 SPRYD3Q8NCJ5 442 aa16.46■□□□□ 0.23
CACNB3-216ENST00000550391 NUP133Q8WUM0 1156 aa16.46■□□□□ 0.23
CACNB3-216ENST00000550391 MAP3K14Q99558 947 aa16.46■□□□□ 0.23
CACNB3-216ENST00000550391 NCOA5Q9HCD5 579 aaKnown RBP16.46■□□□□ 0.23
CACNB3-216ENST00000550391 FAM217BQ9NTX9 383 aaPredicted RBP16.46■□□□□ 0.23
CACNB3-216ENST00000550391 FOXD4L1Q9NU39 408 aa16.46■□□□□ 0.23
CACNB3-216ENST00000550391 CCDC196A0A1B0GTZ2 297 aa16.45■□□□□ 0.22
CACNB3-216ENST00000550391 CDC27P30260 824 aa16.45■□□□□ 0.22
CACNB3-216ENST00000550391 ATP2B2Q01814 1243 aa16.45■□□□□ 0.22
CACNB3-216ENST00000550391 PRKG1Q13976 671 aa16.45■□□□□ 0.22
CACNB3-216ENST00000550391 MAP3K11Q16584 847 aa16.45■□□□□ 0.22
CACNB3-216ENST00000550391 RTN1Q16799 776 aa16.45■□□□□ 0.22
CACNB3-216ENST00000550391 ZKSCAN4Q969J2 545 aaPredicted RBP16.45■□□□□ 0.22
CACNB3-216ENST00000550391 ZIC5Q96T25 663 aa16.45■□□□□ 0.22
CACNB3-216ENST00000550391 LLPHQ9BRT6 129 aaKnown RBP16.45■□□□□ 0.22
CACNB3-216ENST00000550391 ARHGEF10LQ9HCE6 1279 aa16.45■□□□□ 0.22
CACNB3-216ENST00000550391 RNF186Q9NXI6 227 aa16.45■□□□□ 0.22
CACNB3-216ENST00000550391 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.45■□□□□ 0.22
CACNB3-216ENST00000550391 SYNPO2Q9UMS6 1093 aa16.45■□□□□ 0.22
CACNB3-216ENST00000550391 A0A1W2PRG0 241 aa16.44■□□□□ 0.22
CACNB3-216ENST00000550391 IREB2P48200 963 aaKnown RBP16.44■□□□□ 0.22
CACNB3-216ENST00000550391 MAP3K9P80192 1104 aa16.44■□□□□ 0.22
CACNB3-216ENST00000550391 CPLX2Q6PUV4 134 aaKnown RBP16.44■□□□□ 0.22
CACNB3-216ENST00000550391 CCDC144CPQ8IYA2 1237 aa16.44■□□□□ 0.22
CACNB3-216ENST00000550391 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
CACNB3-216ENST00000550391 CTCFLQ8NI51 663 aaPredicted RBP16.44■□□□□ 0.22
CACNB3-216ENST00000550391 CCDC102AQ96A19 550 aa16.44■□□□□ 0.22
CACNB3-216ENST00000550391 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
CACNB3-216ENST00000550391 RBM28Q9NW13 759 aaKnown RBP16.44■□□□□ 0.22
CACNB3-216ENST00000550391 SMC3Q9UQE7 1217 aa16.44■□□□□ 0.22
CACNB3-216ENST00000550391 PHIPQ8WWQ0 1821 aa16.43■□□□□ 0.22
CACNB3-216ENST00000550391 USP17L5A8MUK1 530 aa16.43■□□□□ 0.22
CACNB3-216ENST00000550391 CPLX1O14810 134 aa16.43■□□□□ 0.22
CACNB3-216ENST00000550391 TRPA1O75762 1119 aa16.43■□□□□ 0.22
CACNB3-216ENST00000550391 CTDNEP1O95476 244 aa16.43■□□□□ 0.22
CACNB3-216ENST00000550391 SNHG28P0DPA3 235 aa16.43■□□□□ 0.22
CACNB3-216ENST00000550391 PTPRAP18433 802 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms