RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 ZNF236Q9UL36 1845 aa14.06□□□□□ -0.16
SMARCD1-208ENST00000550280 PRKAB2O43741 272 aa14.05□□□□□ -0.16
SMARCD1-208ENST00000550280 POLR3DP05423 398 aaPredicted RBP14.05□□□□□ -0.16
SMARCD1-208ENST00000550280 ADORA2AP29274 412 aa14.05□□□□□ -0.16
SMARCD1-208ENST00000550280 ATN1P54259 1190 aaPredicted RBP14.05□□□□□ -0.16
SMARCD1-208ENST00000550280 TMED8Q6PL24 325 aaPredicted RBP14.05□□□□□ -0.16
SMARCD1-208ENST00000550280 LPAR1Q92633 364 aa14.05□□□□□ -0.16
SMARCD1-208ENST00000550280 CABP5Q9NP86 173 aa14.05□□□□□ -0.16
SMARCD1-208ENST00000550280 MCM9Q9NXL9 1143 aa14.05□□□□□ -0.16
SMARCD1-208ENST00000550280 STXBP5LQ9Y2K9 1186 aa14.05□□□□□ -0.16
SMARCD1-208ENST00000550280 CYP2D7A0A087X1C5 515 aa14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 GOLIM4O00461 696 aa14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 GLRX3O76003 335 aaKnown RBP14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 AKR1B1P15121 316 aa14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 ERCC3P19447 782 aa14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 ATP2B2Q01814 1243 aa14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 COG2Q14746 738 aa14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 ANO1Q5XXA6 986 aa14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 ERC1Q8IUD2 1116 aa14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 DNAJC2Q99543 621 aaKnown RBP14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 CRNKL1Q9BZJ0 848 aaKnown RBP14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 SPATC1LQ9H0A9 340 aa14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 ARMT1Q9H993 441 aa14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 CWC22Q9HCG8 908 aaKnown RBP14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 EYSQ5T1H1 3165 aa14.04□□□□□ -0.16
SMARCD1-208ENST00000550280 POTEB2H3BUK9 544 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 APBB1O00213 710 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 DNM1LO00429 736 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 CNGA1P29973 690 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 DSG3P32926 999 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 RTP1P59025 263 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 PRAMEF19Q5SWL8 479 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 GJC2Q5T442 439 aaPredicted RBP14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 OLFML2BQ68BL8 750 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 ATG4CQ96DT6 458 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 GUCD1Q96NT3 240 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 IVNS1ABPQ9Y6Y0 642 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 LTBP2Q14767 1821 aa14.03□□□□□ -0.16
SMARCD1-208ENST00000550280 MPHOSPH10O00566 681 aaKnown RBP14.02□□□□□ -0.17
SMARCD1-208ENST00000550280 ADD2P35612 726 aa14.02□□□□□ -0.17
SMARCD1-208ENST00000550280 TTF1Q15361 905 aaPredicted RBP14.02□□□□□ -0.17
SMARCD1-208ENST00000550280 TMEM179Q6ZVK1 233 aa14.02□□□□□ -0.17
SMARCD1-208ENST00000550280 SPICE1Q8N0Z3 855 aa14.02□□□□□ -0.17
SMARCD1-208ENST00000550280 MIER1Q8N108 512 aa14.02□□□□□ -0.17
SMARCD1-208ENST00000550280 SHCBP1Q8NEM2 672 aa14.02□□□□□ -0.17
SMARCD1-208ENST00000550280 TANGO6Q9C0B7 1094 aa14.02□□□□□ -0.17
SMARCD1-208ENST00000550280 TMX2Q9Y320 296 aa14.02□□□□□ -0.17
SMARCD1-208ENST00000550280 CDH23Q9H251 3354 aa14.02□□□□□ -0.17
SMARCD1-208ENST00000550280 MSCO60682 206 aa14.01□□□□□ -0.17
SMARCD1-208ENST00000550280 MBD4O95243 580 aa14.01□□□□□ -0.17
SMARCD1-208ENST00000550280 TMEM132BQ14DG7 1078 aa14.01□□□□□ -0.17
SMARCD1-208ENST00000550280 KIF1BPQ96EK5 621 aa14.01□□□□□ -0.17
SMARCD1-208ENST00000550280 ZBTB40Q9NUA8 1239 aa14.01□□□□□ -0.17
SMARCD1-208ENST00000550280 FBXO28Q9NVF7 368 aa14.01□□□□□ -0.17
SMARCD1-208ENST00000550280 HOXC10Q9NYD6 342 aa14.01□□□□□ -0.17
SMARCD1-208ENST00000550280 ZBED9Q6R2W3 1325 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 PARP14Q460N5 1801 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 VCANP13611 3396 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 SEPT4O43236 478 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 STRNO43815 780 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 SNX17Q15036 470 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 FAM47AQ5JRC9 791 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 C9orf50Q5SZB4 431 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 C12orf60Q5U649 245 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 SLC39A5Q6ZMH5 540 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 SH3RF1Q7Z6J0 888 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 DPP9Q86TI2 863 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 MAML3Q96JK9 1138 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 GNL3Q9BVP2 549 aaKnown RBP eCLIP14□□□□□ -0.17
SMARCD1-208ENST00000550280 BOLA2Q9H3K6 86 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 VCPKMTQ9H867 229 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 ADAMTS5Q9UNA0 930 aa14□□□□□ -0.17
SMARCD1-208ENST00000550280 TRIM43BA6NCK2 446 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 FLOT1O75955 427 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 ITGB8P26012 769 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 CDK8P49336 464 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 ICA1Q05084 483 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 LRRC41Q15345 812 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 SHHQ15465 462 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 TRIM60Q495X7 471 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 HSP90AB4PQ58FF6 505 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 FAM109BQ6ICB4 259 aaPredicted RBP13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 C16orf86Q6ZW13 317 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 ABRAQ8N0Z2 381 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 CLASRPQ8N2M8 674 aaKnown RBP13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 REPS2Q8NFH8 660 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 TRIM43Q96BQ3 446 aaPredicted RBP13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 PDLIM7Q9NR12 457 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 PAG1Q9NWQ8 432 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 SWAP70Q9UH65 585 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 ATP11BQ9Y2G3 1177 aa13.99□□□□□ -0.17
SMARCD1-208ENST00000550280 CUL9Q8IWT3 2517 aa13.98□□□□□ -0.17
SMARCD1-208ENST00000550280 USP17L12C9JPN9 530 aa13.98□□□□□ -0.17
SMARCD1-208ENST00000550280 USP17L21D6R901 530 aa13.98□□□□□ -0.17
SMARCD1-208ENST00000550280 IFIT2P09913 472 aaKnown RBP13.98□□□□□ -0.17
SMARCD1-208ENST00000550280 TAL1P17542 331 aaPredicted RBP13.98□□□□□ -0.17
SMARCD1-208ENST00000550280 ATP5JP18859 108 aa13.98□□□□□ -0.17
SMARCD1-208ENST00000550280 ADCYAP1R1P41586 468 aa13.98□□□□□ -0.17
SMARCD1-208ENST00000550280 PLS1Q14651 629 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms