RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 SRGAP1Q7Z6B7 1085 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 MIGA1Q8NAN2 632 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 RASSF8Q8NHQ8 419 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 ARHGEF1Q92888 912 aaKnown RBP12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 KIFC2Q96AC6 838 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 MAP3K14Q99558 947 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 WWC3Q9ULE0 1092 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 RIC1Q4ADV7 1423 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 SH2B2O14492 632 aaPredicted RBP12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 IRS4O14654 1257 aaPredicted RBP12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 FILIP1LQ4L180 1135 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 FAM196AQ6ZSG2 479 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 ARMT1Q9H993 441 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 ZSWIM5Q9P217 1185 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 COL24A1Q17RW2 1714 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 ECM29Q5VYK3 1845 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 ABCC12Q96J65 1359 aa12.19□□□□□ -0.46
SMARCC2-208ENST00000550150 EIF3JO75822 258 aaKnown RBP12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 VSNL1P62760 191 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 CTNND2Q9UQB3 1225 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 RRP15Q9Y3B9 282 aaKnown RBP12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 ERICH2A1L162 156 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 CTAGE15A4D2H0 777 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 CTAGE8P0CG41 777 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 PPARDQ03181 441 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 HDXQ7Z353 690 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 CTAGE6Q86UF2 777 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 CTAGE4Q8IX94 777 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 NBPF3Q9H094 633 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 VPS54Q9P1Q0 977 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 MTMR7Q9Y216 660 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 SYNRGQ9UMZ2 1314 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 CCDC151A5D8V7 595 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 PRKAB2O43741 272 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 RSRC2Q7L4I2 434 aaKnown RBP12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 MAGEB6Q8N7X4 407 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 MLKLQ8NB16 471 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 PIH1D3Q9NQM4 214 aaKnown RBP12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 TAB2Q9NYJ8 693 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 TRIM10Q9UDY6 481 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 ADGRG1Q9Y653 693 aa12.18□□□□□ -0.46
SMARCC2-208ENST00000550150 MBD4O95243 580 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 CTSWP56202 376 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 RTN1Q16799 776 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 SLC4A8Q2Y0W8 1093 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 FCHSD1Q86WN1 690 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 PLA2G12BQ9BX93 195 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 MYO5AQ9Y4I1 1855 aaKnown RBP12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 TULP2O00295 520 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 PHKA1P46020 1223 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 TOB1P50616 345 aaPredicted RBP12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 FXR1P51114 621 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 MRPS25P82663 173 aaKnown RBP12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 ZNF174Q15697 407 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 ERFEQ4G0M1 354 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 GSPT2Q8IYD1 628 aaKnown RBP12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 NOA1Q8NC60 698 aaKnown RBP12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 RIN2Q8WYP3 895 aaPredicted RBP12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 ANKZF1Q9H8Y5 726 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 CDC23Q9UJX2 597 aa12.17□□□□□ -0.46
SMARCC2-208ENST00000550150 SRGAP2O75044 1071 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 RPS6KA4O75676 772 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 ITGA6P23229 1130 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 ACTN2P35609 894 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 CEP112Q8N8E3 955 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 CAGE1Q8TC20 777 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 MED15Q96RN5 788 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 HDAC6Q9UBN7 1215 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 CDHR2Q9BYE9 1310 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 RRAGBQ5VZM2 374 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 ZNF772Q68DY9 489 aaPredicted RBP12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 MFSD6Q6ZSS7 791 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 GOLGA5Q8TBA6 731 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 CD44P16070 742 aaKnown RBP12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 CASP8Q14790 479 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 WTAPQ15007 396 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 DNAJC21Q5F1R6 531 aaKnown RBP12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 ENOX1Q8TC92 643 aaKnown RBP12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 PCMTD1Q96MG8 357 aaPredicted RBP12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 PLIN2Q99541 437 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 LY9Q9HBG7 655 aa12.16□□□□□ -0.46
SMARCC2-208ENST00000550150 TBX2Q13207 712 aaPredicted RBP12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 DRC1Q96MC2 740 aa12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 FAM204AQ9H8W3 233 aa12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 MMP1P03956 469 aa12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 PDE6AP16499 860 aa12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 MATR3P43243 847 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 PLCD1P51178 756 aa12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 NR1I3Q14994 352 aa12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 SART3Q15020 963 aaKnown RBP12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 BRD3Q15059 726 aa12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 EXOC4Q96A65 974 aa12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 UBAC1Q9BSL1 405 aa12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.46
SMARCC2-208ENST00000550150 ATP8B1O43520 1251 aa12.15□□□□□ -0.47
SMARCC2-208ENST00000550150 KRT9P35527 623 aa12.15□□□□□ -0.47
SMARCC2-208ENST00000550150 ADD2P35612 726 aa12.15□□□□□ -0.47
SMARCC2-208ENST00000550150 BEND6Q5SZJ8 279 aaPredicted RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms