RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.01■□□□□ 0.634e-6■□□□□ 8.1
ATXN2-219ENST00000550104 NWD1Q149M9 1564 aa19.01■□□□□ 0.63
ATXN2-219ENST00000550104 NELFBQ8WX92 580 aa19.01■□□□□ 0.63
ATXN2-219ENST00000550104 EPSTI1Q96J88 318 aa19.01■□□□□ 0.63
ATXN2-219ENST00000550104 USP40Q9NVE5 1235 aa19.01■□□□□ 0.63
ATXN2-219ENST00000550104 USP17L3A6NCW0 530 aa19.01■□□□□ 0.63
ATXN2-219ENST00000550104 USP17L4A6NCW7 530 aa19.01■□□□□ 0.63
ATXN2-219ENST00000550104 POLR3GO15318 223 aaPredicted RBP19.01■□□□□ 0.63
ATXN2-219ENST00000550104 MRPL12P52815 198 aaKnown RBP19.01■□□□□ 0.63
ATXN2-219ENST00000550104 FAM193AP78312 1265 aa19.01■□□□□ 0.63
ATXN2-219ENST00000550104 SV2BQ7L1I2 683 aa19.01■□□□□ 0.63
ATXN2-219ENST00000550104 USP17L1Q7RTZ2 530 aa19.01■□□□□ 0.63
ATXN2-219ENST00000550104 BICDL2A1A5D9 508 aa19■□□□□ 0.63
ATXN2-219ENST00000550104 PRPF3O43395 683 aaKnown RBP19■□□□□ 0.63
ATXN2-219ENST00000550104 NTSR2O95665 410 aa19■□□□□ 0.63
ATXN2-219ENST00000550104 GUCA1BQ9UMX6 200 aa19■□□□□ 0.63
ATXN2-219ENST00000550104 ARHGEF1Q92888 912 aaKnown RBP19■□□□□ 0.63
ATXN2-219ENST00000550104 HPS5Q9UPZ3 1129 aa19■□□□□ 0.63
ATXN2-219ENST00000550104 WDHD1O75717 1129 aaPredicted RBP19■□□□□ 0.63
ATXN2-219ENST00000550104 CSGALNACT2Q8N6G5 542 aa19■□□□□ 0.63
ATXN2-219ENST00000550104 EIF3JO75822 258 aaKnown RBP18.99■□□□□ 0.63
ATXN2-219ENST00000550104 MSL1Q68DK7 614 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 INTS5Q6P9B9 1019 aaKnown RBP18.99■□□□□ 0.63
ATXN2-219ENST00000550104 SPDYE3A6NKU9 549 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 PPP1R12BO60237 982 aaPredicted RBP18.99■□□□□ 0.63
ATXN2-219ENST00000550104 CABP7Q86V35 215 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 VEZTQ9HBM0 779 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 JADE2Q9NQC1 790 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 LRWD1Q9UFC0 647 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 MAN1B1Q9UKM7 699 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 VIRMAQ69YN4 1812 aaKnown RBP18.99■□□□□ 0.63
ATXN2-219ENST00000550104 IKBKBO14920 756 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 CYLC1P35663 651 aaPredicted RBP18.99■□□□□ 0.63
ATXN2-219ENST00000550104 ADCY7P51828 1080 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 GRAPQ13588 217 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 IQCEQ6IPM2 695 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 OGFOD1Q8N543 542 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 GRAPLQ8TC17 118 aaPredicted RBP18.99■□□□□ 0.63
ATXN2-219ENST00000550104 DCP1AQ9NPI6 582 aaPredicted RBP18.99■□□□□ 0.63
ATXN2-219ENST00000550104 TRIM37O94972 964 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 ERCC3P19447 782 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 SYCP1Q15431 976 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 AXDND1Q5T1B0 1012 aaPredicted RBP18.99■□□□□ 0.63
ATXN2-219ENST00000550104 RESP18Q5W5W9 173 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 TRIML1Q8N9V2 468 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 ERO1AQ96HE7 468 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 SRPRBQ9Y5M8 271 aaKnown RBP18.99■□□□□ 0.63
ATXN2-219ENST00000550104 PNPLA7Q6ZV29 1317 aa18.99■□□□□ 0.63
ATXN2-219ENST00000550104 ERICH4A6NGS2 130 aa18.98■□□□□ 0.63
ATXN2-219ENST00000550104 ERMNQ8TAM6 284 aa18.98■□□□□ 0.63
ATXN2-219ENST00000550104 PUF60Q9UHX1 559 aaKnown RBP18.98■□□□□ 0.63
ATXN2-219ENST00000550104 TBC1D8BQ0IIM8 1120 aa18.98■□□□□ 0.63
ATXN2-219ENST00000550104 ELF2Q15723 593 aa18.98■□□□□ 0.63
ATXN2-219ENST00000550104 DYMQ7RTS9 669 aa18.98■□□□□ 0.63
ATXN2-219ENST00000550104 DRC1Q96MC2 740 aa18.98■□□□□ 0.63
ATXN2-219ENST00000550104 CCDC94Q9BW85 323 aaPredicted RBP18.98■□□□□ 0.63
ATXN2-219ENST00000550104 SRRTQ9BXP5 876 aaKnown RBP18.98■□□□□ 0.63
ATXN2-219ENST00000550104 CCDC144BQ3MJ40 725 aa18.98■□□□□ 0.63
ATXN2-219ENST00000550104 CTR9Q6PD62 1173 aa18.98■□□□□ 0.63
ATXN2-219ENST00000550104 LINC00116Q8NCU8 138 aa18.98■□□□□ 0.63
ATXN2-219ENST00000550104 DESI2Q9BSY9 194 aa18.98■□□□□ 0.63
ATXN2-219ENST00000550104 STK36Q9NRP7 1315 aa18.98■□□□□ 0.63
ATXN2-219ENST00000550104 LRP10Q7Z4F1 713 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 ZBTB9Q96C00 473 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 EEF2KMTQ96G04 330 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 CTAGE9A4FU28 777 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 SLC1A4P43007 532 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 BMS1Q14692 1282 aaKnown RBP18.97■□□□□ 0.63
ATXN2-219ENST00000550104 PTPREP23469 700 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 KRT9P35527 623 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 SKIDA1Q1XH10 827 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 SHC4Q6S5L8 630 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 SH3RF3Q8TEJ3 882 aaPredicted RBP18.97■□□□□ 0.63
ATXN2-219ENST00000550104 MYO1BO43795 1136 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 TBCAO75347 108 aaKnown RBP18.97■□□□□ 0.63
ATXN2-219ENST00000550104 TECP42680 631 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 TMTC3Q6ZXV5 915 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 PLA2G4DQ86XP0 818 aa18.97■□□□□ 0.63
ATXN2-219ENST00000550104 U2AF2P26368 475 aaKnown RBP eCLIP18.96■□□□□ 0.633e-6■■■□□ 15.8
ATXN2-219ENST00000550104 CALCRLQ16602 461 aa18.96■□□□□ 0.63
ATXN2-219ENST00000550104 SNX29Q8TEQ0 813 aa18.96■□□□□ 0.63
ATXN2-219ENST00000550104 KIAA0825Q8IV33 1275 aa18.96■□□□□ 0.63
ATXN2-219ENST00000550104 SLC44A5Q8NCS7 719 aa18.96■□□□□ 0.63
ATXN2-219ENST00000550104 NOC4LQ9BVI4 516 aaKnown RBP18.96■□□□□ 0.63
ATXN2-219ENST00000550104 CARD6Q9BX69 1037 aa18.96■□□□□ 0.63
ATXN2-219ENST00000550104 TNIP1Q15025 636 aa18.96■□□□□ 0.63
ATXN2-219ENST00000550104 SARM1Q6SZW1 724 aa18.96■□□□□ 0.63
ATXN2-219ENST00000550104 GBP3Q9H0R5 595 aa18.96■□□□□ 0.63
ATXN2-219ENST00000550104 SLFN14P0C7P3 912 aa18.96■□□□□ 0.63
ATXN2-219ENST00000550104 CCDC42Q96M95 316 aa18.96■□□□□ 0.63
ATXN2-219ENST00000550104 ZNF215Q9UL58 517 aaPredicted RBP18.96■□□□□ 0.63
ATXN2-219ENST00000550104 APBA3O96018 575 aa18.95■□□□□ 0.62
ATXN2-219ENST00000550104 SPATA1Q5VX52 437 aa18.95■□□□□ 0.62
ATXN2-219ENST00000550104 TAF4BQ92750 862 aa18.95■□□□□ 0.62
ATXN2-219ENST00000550104 QTRT2Q9H974 415 aaKnown RBP18.95■□□□□ 0.62
ATXN2-219ENST00000550104 LTN1O94822 1766 aa18.95■□□□□ 0.62
ATXN2-219ENST00000550104 ARID5AQ03989 594 aa18.95■□□□□ 0.62
ATXN2-219ENST00000550104 GPIHBP1Q8IV16 184 aa18.95■□□□□ 0.62
ATXN2-219ENST00000550104 SEPT12Q8IYM1 358 aa18.95■□□□□ 0.62
ATXN2-219ENST00000550104 TEKT1Q969V4 418 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms