RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 TRPV1Q8NER1 839 aa18.67■□□□□ 0.58
RAB5C-205ENST00000550013 DCP1AQ9NPI6 582 aaPredicted RBP18.67■□□□□ 0.58
RAB5C-205ENST00000550013 DDX20Q9UHI6 824 aaKnown RBP18.67■□□□□ 0.58
RAB5C-205ENST00000550013 LAMA2P24043 3122 aaKnown RBP18.66■□□□□ 0.58
RAB5C-205ENST00000550013 ZNF236Q9UL36 1845 aa18.66■□□□□ 0.58
RAB5C-205ENST00000550013 MDM2Q00987 491 aaPredicted RBP18.66■□□□□ 0.58
RAB5C-205ENST00000550013 SLFNL1Q499Z3 407 aa18.66■□□□□ 0.58
RAB5C-205ENST00000550013 MOV10L1Q9BXT6 1211 aaKnown RBP18.66■□□□□ 0.58
RAB5C-205ENST00000550013 TANGO6Q9C0B7 1094 aa18.66■□□□□ 0.58
RAB5C-205ENST00000550013 SENP6Q9GZR1 1112 aaPredicted RBP18.66■□□□□ 0.58
RAB5C-205ENST00000550013 IGHA2P01877 340 aa18.65■□□□□ 0.58
RAB5C-205ENST00000550013 COG2Q14746 738 aa18.65■□□□□ 0.58
RAB5C-205ENST00000550013 GPR153Q6NV75 609 aa18.65■□□□□ 0.58
RAB5C-205ENST00000550013 CLEC10AQ8IUN9 316 aa18.65■□□□□ 0.58
RAB5C-205ENST00000550013 CLASRPQ8N2M8 674 aaKnown RBP18.65■□□□□ 0.58
RAB5C-205ENST00000550013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.65■□□□□ 0.58
RAB5C-205ENST00000550013 KIF1BPQ96EK5 621 aa18.65■□□□□ 0.58
RAB5C-205ENST00000550013 DYNLL2Q96FJ2 89 aa18.65■□□□□ 0.58
RAB5C-205ENST00000550013 ARMT1Q9H993 441 aa18.65■□□□□ 0.58
RAB5C-205ENST00000550013 PARP14Q460N5 1801 aa18.65■□□□□ 0.58
RAB5C-205ENST00000550013 PRKAB2O43741 272 aa18.64■□□□□ 0.57
RAB5C-205ENST00000550013 IFIT2P09913 472 aaKnown RBP18.64■□□□□ 0.57
RAB5C-205ENST00000550013 ADORA2AP29274 412 aa18.64■□□□□ 0.57
RAB5C-205ENST00000550013 ATN1P54259 1190 aaPredicted RBP18.64■□□□□ 0.57
RAB5C-205ENST00000550013 SIRT2Q8IXJ6 389 aa18.64■□□□□ 0.57
RAB5C-205ENST00000550013 LPAR1Q92633 364 aa18.64■□□□□ 0.57
RAB5C-205ENST00000550013 SPATC1LQ9H0A9 340 aa18.64■□□□□ 0.57
RAB5C-205ENST00000550013 HOXC10Q9NYD6 342 aa18.64■□□□□ 0.57
RAB5C-205ENST00000550013 MYH7P12883 1935 aa18.63■□□□□ 0.57
RAB5C-205ENST00000550013 ZNFX1Q9P2E3 1918 aaKnown RBP18.63■□□□□ 0.57
RAB5C-205ENST00000550013 SMIM22K7EJ46 135 aa18.63■□□□□ 0.57
RAB5C-205ENST00000550013 MBD4O95243 580 aa18.63■□□□□ 0.57
RAB5C-205ENST00000550013 CYBAP13498 195 aa18.63■□□□□ 0.57
RAB5C-205ENST00000550013 AKR1B1P15121 316 aa18.63■□□□□ 0.57
RAB5C-205ENST00000550013 ERCC3P19447 782 aa18.63■□□□□ 0.57
RAB5C-205ENST00000550013 TMEM179Q6ZVK1 233 aa18.63■□□□□ 0.57
RAB5C-205ENST00000550013 DPP9Q86TI2 863 aa18.63■□□□□ 0.57
RAB5C-205ENST00000550013 SIAH1Q8IUQ4 282 aa18.63■□□□□ 0.57
RAB5C-205ENST00000550013 DLL1O00548 723 aa18.62■□□□□ 0.57
RAB5C-205ENST00000550013 MSCO60682 206 aa18.62■□□□□ 0.57
RAB5C-205ENST00000550013 COBLO75128 1261 aa18.62■□□□□ 0.57
RAB5C-205ENST00000550013 SPICE1Q8N0Z3 855 aa18.62■□□□□ 0.57
RAB5C-205ENST00000550013 BOLA2Q9H3K6 86 aa18.62■□□□□ 0.57
RAB5C-205ENST00000550013 PAG1Q9NWQ8 432 aa18.62■□□□□ 0.57
RAB5C-205ENST00000550013 MTMR10Q9NXD2 777 aa18.62■□□□□ 0.57
RAB5C-205ENST00000550013 COL11A1P12107 1806 aaPredicted RBP18.62■□□□□ 0.57
RAB5C-205ENST00000550013 CUL9Q8IWT3 2517 aa18.62■□□□□ 0.57
RAB5C-205ENST00000550013 LTBP2Q14767 1821 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 ZBED9Q6R2W3 1325 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 CYP2D7A0A087X1C5 515 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 DNM1LO00429 736 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 CHGBP05060 677 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 DSG3P32926 999 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 ADD2P35612 726 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 PLS1Q14651 629 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 GJC2Q5T442 439 aaPredicted RBP18.61■□□□□ 0.57
RAB5C-205ENST00000550013 ANO1Q5XXA6 986 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 OLFML2BQ68BL8 750 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
RAB5C-205ENST00000550013 RPAP2Q8IXW5 612 aaPredicted RBP18.61■□□□□ 0.57
RAB5C-205ENST00000550013 SHCBP1Q8NEM2 672 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 ATG4CQ96DT6 458 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 SWAP70Q9UH65 585 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 COG6Q9Y2V7 657 aa18.61■□□□□ 0.57
RAB5C-205ENST00000550013 STRNO43815 780 aa18.6■□□□□ 0.57
RAB5C-205ENST00000550013 HMMRO75330 724 aa18.6■□□□□ 0.57
RAB5C-205ENST00000550013 FLOT1O75955 427 aa18.6■□□□□ 0.57
RAB5C-205ENST00000550013 RTP1P59025 263 aa18.6■□□□□ 0.57
RAB5C-205ENST00000550013 ICA1Q05084 483 aa18.6■□□□□ 0.57
RAB5C-205ENST00000550013 ARHGEF10LQ9HCE6 1279 aa18.6■□□□□ 0.57
RAB5C-205ENST00000550013 ZBTB40Q9NUA8 1239 aa18.6■□□□□ 0.57
RAB5C-205ENST00000550013 TMX2Q9Y320 296 aa18.6■□□□□ 0.57
RAB5C-205ENST00000550013 SMCHD1A6NHR9 2005 aa18.59■□□□□ 0.57
RAB5C-205ENST00000550013 PRAMEF19Q5SWL8 479 aa18.59■□□□□ 0.57
RAB5C-205ENST00000550013 NCAPG2Q86XI2 1143 aa18.59■□□□□ 0.57
RAB5C-205ENST00000550013 MB21D1Q8N884 522 aa18.59■□□□□ 0.57
RAB5C-205ENST00000550013 LBHD1Q9BQE6 289 aaPredicted RBP18.59■□□□□ 0.57
RAB5C-205ENST00000550013 VCPKMTQ9H867 229 aa18.59■□□□□ 0.57
RAB5C-205ENST00000550013 ATP8A2Q9NTI2 1148 aa18.59■□□□□ 0.57
RAB5C-205ENST00000550013 RAB11FIP3O75154 756 aa18.58■□□□□ 0.56
RAB5C-205ENST00000550013 MS4A1P11836 297 aa18.58■□□□□ 0.56
RAB5C-205ENST00000550013 ATP5JP18859 108 aa18.58■□□□□ 0.56
RAB5C-205ENST00000550013 CDK8P49336 464 aa18.58■□□□□ 0.56
RAB5C-205ENST00000550013 C12orf60Q5U649 245 aa18.58■□□□□ 0.56
RAB5C-205ENST00000550013 HAUS7Q99871 368 aa18.58■□□□□ 0.56
RAB5C-205ENST00000550013 MROH8Q9H579 483 aa18.58■□□□□ 0.56
RAB5C-205ENST00000550013 SH2D4AQ9H788 454 aa18.58■□□□□ 0.56
RAB5C-205ENST00000550013 DDX19BQ9UMR2 479 aa18.58■□□□□ 0.56
RAB5C-205ENST00000550013 ATP11BQ9Y2G3 1177 aa18.58■□□□□ 0.56
RAB5C-205ENST00000550013 STXBP5LQ9Y2K9 1186 aa18.58■□□□□ 0.56
RAB5C-205ENST00000550013 PLXNA1Q9UIW2 1896 aa18.57■□□□□ 0.56
RAB5C-205ENST00000550013 USP17L12C9JPN9 530 aa18.57■□□□□ 0.56
RAB5C-205ENST00000550013 USP17L21D6R901 530 aa18.57■□□□□ 0.56
RAB5C-205ENST00000550013 SEPT4O43236 478 aa18.57■□□□□ 0.56
RAB5C-205ENST00000550013 MYCNP04198 464 aaPredicted RBP18.57■□□□□ 0.56
RAB5C-205ENST00000550013 TMEM132BQ14DG7 1078 aa18.57■□□□□ 0.56
RAB5C-205ENST00000550013 ARRDC4Q8NCT1 418 aa18.57■□□□□ 0.56
RAB5C-205ENST00000550013 CCDC17Q96LX7 622 aa18.57■□□□□ 0.56
RAB5C-205ENST00000550013 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.57■□□□□ 0.56
RAB5C-205ENST00000550013 KBTBD13C9JR72 458 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms