RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 NAPBQ9H115 298 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 HELLSQ9NRZ9 838 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 BTBD7Q9P203 1132 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 A0A0G2JMZ2 1700 aa11.69□□□□□ -0.54
HDAC7-229ENST00000549883 SPDYE16A6NNV3 312 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-229ENST00000549883 GSPT1P15170 499 aaKnown RBP11.68□□□□□ -0.54
HDAC7-229ENST00000549883 EN2P19622 333 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-229ENST00000549883 USP14P54578 494 aa11.68□□□□□ -0.54
HDAC7-229ENST00000549883 MLLT1Q03111 559 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-229ENST00000549883 PPARAQ07869 468 aa11.68□□□□□ -0.54
HDAC7-229ENST00000549883 FAM47AQ5JRC9 791 aa11.68□□□□□ -0.54
HDAC7-229ENST00000549883 RAET1EQ8TD07 263 aa11.68□□□□□ -0.54
HDAC7-229ENST00000549883 IL25Q9H293 177 aa11.68□□□□□ -0.54
HDAC7-229ENST00000549883 MKNK2Q9HBH9 465 aa11.68□□□□□ -0.54
HDAC7-229ENST00000549883 GJD2Q9UKL4 321 aa11.68□□□□□ -0.54
HDAC7-229ENST00000549883 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
HDAC7-229ENST00000549883 TMX2Q9Y320 296 aa11.68□□□□□ -0.54
HDAC7-229ENST00000549883 IGKV6D-41A0A0C4DH26 115 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 HOXD10P28358 340 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 GRK4P32298 578 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 PRMT2P55345 433 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 ERVK-9P63128 1117 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 ERVK-24P63145 666 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 MCMDC2Q4G0Z9 681 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 SAMD1Q6SPF0 538 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-229ENST00000549883 GPRC5AQ8NFJ5 357 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 NUP88Q99567 741 aaPredicted RBP11.67□□□□□ -0.54
HDAC7-229ENST00000549883 NBPF3Q9H094 633 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 KANSL2Q9H9L4 492 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 FBXO28Q9NVF7 368 aa11.67□□□□□ -0.54
HDAC7-229ENST00000549883 ZNFX1Q9P2E3 1918 aaKnown RBP11.66□□□□□ -0.54
HDAC7-229ENST00000549883 RAD21O60216 631 aa11.66□□□□□ -0.54
HDAC7-229ENST00000549883 ADCY3O60266 1144 aa11.66□□□□□ -0.54
HDAC7-229ENST00000549883 NMT2O60551 498 aa11.66□□□□□ -0.54
HDAC7-229ENST00000549883 FGAP02671 866 aa11.66□□□□□ -0.54
HDAC7-229ENST00000549883 HSPD1P10809 573 aaKnown RBP11.66□□□□□ -0.54
HDAC7-229ENST00000549883 TRIM32Q13049 653 aa11.66□□□□□ -0.54
HDAC7-229ENST00000549883 CWC27Q6UX04 472 aaKnown RBP11.66□□□□□ -0.54
HDAC7-229ENST00000549883 COA7Q96BR5 231 aa11.66□□□□□ -0.54
HDAC7-229ENST00000549883 CHMP4CQ96CF2 233 aa11.66□□□□□ -0.54
HDAC7-229ENST00000549883 CEP95Q96GE4 821 aa11.66□□□□□ -0.54
HDAC7-229ENST00000549883 NACAP1Q9BZK3 213 aa11.66□□□□□ -0.54
HDAC7-229ENST00000549883 TANGO6Q9C0B7 1094 aa11.66□□□□□ -0.54
HDAC7-229ENST00000549883 ARHGEF10LQ9HCE6 1279 aa11.66□□□□□ -0.54
HDAC7-229ENST00000549883 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDAC7-229ENST00000549883 TNRC18O15417 2968 aaPredicted RBP11.66□□□□□ -0.54
HDAC7-229ENST00000549883 CCDC171Q6TFL3 1326 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 MKI67P46013 3256 aaKnown RBP11.65□□□□□ -0.54
HDAC7-229ENST00000549883 HAND2P61296 217 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 TFAP4Q01664 338 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 FAM83BQ5T0W9 1011 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 TTC22Q5TAA0 569 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 LBX2Q6XYB7 198 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 RASGRP2Q7LDG7 609 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 NBPF11Q86T75 865 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 LRRC47Q8N1G4 583 aaKnown RBP11.65□□□□□ -0.54
HDAC7-229ENST00000549883 ATG4CQ96DT6 458 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 UNC93B1Q9H1C4 597 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 BIN2Q9UBW5 565 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-229ENST00000549883 CLIP2Q9UDT6 1046 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 RABGAP1Q9Y3P9 1069 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 PDE4DIPQ5VU43 2346 aa11.65□□□□□ -0.54
HDAC7-229ENST00000549883 LAMA4Q16363 1823 aa11.65□□□□□ -0.55
HDAC7-229ENST00000549883 FLOT1O75955 427 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 INHAP05111 366 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 CCL5P13501 91 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 CYP2B6P20813 491 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 DSG3P32926 999 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 IRF5Q13568 498 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 COG2Q14746 738 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 ALX1Q15699 326 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 CCL14Q16627 93 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 GPR142Q7Z601 462 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 ZNF444Q8N0Y2 327 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-229ENST00000549883 NEDD1Q8NHV4 660 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 LPAR1Q92633 364 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 SHISA4Q96DD7 197 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 IL17RBQ9NRM6 502 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 MTMR4Q9NYA4 1195 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 NYAP2Q9P242 653 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 ANAPC4Q9UJX5 808 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 SMCHD1A6NHR9 2005 aa11.64□□□□□ -0.55
HDAC7-229ENST00000549883 F5H6K3 240 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 WDR46O15213 610 aaKnown RBP11.63□□□□□ -0.55
HDAC7-229ENST00000549883 NDUFB10O96000 172 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 TSPY3P0CV98 308 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 TSPY8P0CW00 308 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 PDE4BQ07343 736 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 KLRC3Q07444 240 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 MORN1Q5T089 497 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 WDR78Q5VTH9 848 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 TBC1D10CQ8IV04 446 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 SLAIN1Q8ND83 568 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 TRIB2Q92519 343 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 USP6NLQ92738 828 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 TMEM106CQ9BVX2 250 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 MOV10L1Q9BXT6 1211 aaKnown RBP11.63□□□□□ -0.55
HDAC7-229ENST00000549883 SH2D4AQ9H788 454 aa11.63□□□□□ -0.55
HDAC7-229ENST00000549883 DIAPH3Q9NSV4 1193 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms