RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 KRTAP9-3Q9BYQ3 159 aa7.85□□□□□ -1.15
CCDC38-208ENST00000549876 CWC22Q9HCG8 908 aaKnown RBP7.85□□□□□ -1.15
CCDC38-208ENST00000549876 EBF1Q9UH73 591 aa7.85□□□□□ -1.15
CCDC38-208ENST00000549876 YBX2Q9Y2T7 364 aaKnown RBP7.85□□□□□ -1.15
CCDC38-208ENST00000549876 RBM47A0AV96 593 aaKnown RBP7.84□□□□□ -1.15
CCDC38-208ENST00000549876 CILPO75339 1184 aa7.84□□□□□ -1.15
CCDC38-208ENST00000549876 YARSP54577 528 aaKnown RBP7.84□□□□□ -1.15
CCDC38-208ENST00000549876 DLG4P78352 724 aa7.84□□□□□ -1.15
CCDC38-208ENST00000549876 SLFN12Q8IYM2 578 aa7.84□□□□□ -1.15
CCDC38-208ENST00000549876 INTS4Q96HW7 963 aaKnown RBP7.84□□□□□ -1.15
CCDC38-208ENST00000549876 IRF2BPLQ9H1B7 796 aa7.84□□□□□ -1.15
CCDC38-208ENST00000549876 FAM221AA4D161 298 aa7.83□□□□□ -1.16
CCDC38-208ENST00000549876 SEMA7AO75326 666 aa7.83□□□□□ -1.16
CCDC38-208ENST00000549876 HOXA5P20719 270 aa7.83□□□□□ -1.16
CCDC38-208ENST00000549876 BUD31P41223 144 aaPredicted RBP7.83□□□□□ -1.16
CCDC38-208ENST00000549876 ST13P50502 369 aaKnown RBP7.83□□□□□ -1.16
CCDC38-208ENST00000549876 TEKQ02763 1124 aa7.83□□□□□ -1.16
CCDC38-208ENST00000549876 BNC2Q6ZN30 1099 aaPredicted RBP7.83□□□□□ -1.16
CCDC38-208ENST00000549876 ZNF605Q86T29 641 aa7.83□□□□□ -1.16
CCDC38-208ENST00000549876 AEBP1Q8IUX7 1158 aa7.83□□□□□ -1.16
CCDC38-208ENST00000549876 BAHD1Q8TBE0 780 aaPredicted RBP7.83□□□□□ -1.16
CCDC38-208ENST00000549876 C20orf173Q96LM9 149 aa7.83□□□□□ -1.16
CCDC38-208ENST00000549876 ZNF552Q9H707 407 aaPredicted RBP7.83□□□□□ -1.16
CCDC38-208ENST00000549876 ZNF281Q9Y2X9 895 aa7.83□□□□□ -1.16
CCDC38-208ENST00000549876 PRR36Q9H6K5 1346 aa7.82□□□□□ -1.16
CCDC38-208ENST00000549876 SNX17Q15036 470 aa7.82□□□□□ -1.16
CCDC38-208ENST00000549876 TAF1CQ15572 869 aaPredicted RBP7.82□□□□□ -1.16
CCDC38-208ENST00000549876 SND1Q7KZF4 910 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCDC38-208ENST00000549876 SPPL2CQ8IUH8 684 aa7.82□□□□□ -1.16
CCDC38-208ENST00000549876 SHISA4Q96DD7 197 aa7.82□□□□□ -1.16
CCDC38-208ENST00000549876 GCM1Q9NP62 436 aa7.82□□□□□ -1.16
CCDC38-208ENST00000549876 SHISA3A0PJX4 238 aa7.81□□□□□ -1.16
CCDC38-208ENST00000549876 CTSWP56202 376 aa7.81□□□□□ -1.16
CCDC38-208ENST00000549876 CHRNEQ04844 493 aa7.81□□□□□ -1.16
CCDC38-208ENST00000549876 EAPPQ56P03 285 aaPredicted RBP7.81□□□□□ -1.16
CCDC38-208ENST00000549876 ANKS4BQ8N8V4 417 aa7.81□□□□□ -1.16
CCDC38-208ENST00000549876 LINC01599Q8WXQ3 324 aa7.81□□□□□ -1.16
CCDC38-208ENST00000549876 KREMEN1Q96MU8 473 aa7.81□□□□□ -1.16
CCDC38-208ENST00000549876 TEX51A0A1B0GUA7 166 aa7.8□□□□□ -1.16
CCDC38-208ENST00000549876 ANKRD33BA6NCL7 494 aa7.8□□□□□ -1.16
CCDC38-208ENST00000549876 NOTOA8MTQ0 251 aa7.8□□□□□ -1.16
CCDC38-208ENST00000549876 CTSHP09668 335 aa7.8□□□□□ -1.16
CCDC38-208ENST00000549876 PDIA4P13667 645 aaKnown RBP7.8□□□□□ -1.16
CCDC38-208ENST00000549876 GATAD2BQ8WXI9 593 aa7.8□□□□□ -1.16
CCDC38-208ENST00000549876 VWCEQ96DN2 955 aa7.8□□□□□ -1.16
CCDC38-208ENST00000549876 G6PC3Q9BUM1 346 aa7.8□□□□□ -1.16
CCDC38-208ENST00000549876 ASPNQ9BXN1 380 aa7.8□□□□□ -1.16
CCDC38-208ENST00000549876 USP31Q70CQ4 1352 aa7.8□□□□□ -1.16
CCDC38-208ENST00000549876 CHURC1-FNTBB4DL54 471 aa7.79□□□□□ -1.16
CCDC38-208ENST00000549876 PSPNO60542 156 aa7.79□□□□□ -1.16
CCDC38-208ENST00000549876 DAB2P98082 770 aa7.79□□□□□ -1.16
CCDC38-208ENST00000549876 LMNB2Q03252 620 aa7.79□□□□□ -1.16
CCDC38-208ENST00000549876 DUSP4Q13115 394 aa7.79□□□□□ -1.16
CCDC38-208ENST00000549876 CAMK2GQ13555 558 aaPredicted RBP7.79□□□□□ -1.16
CCDC38-208ENST00000549876 PARD6AQ9NPB6 346 aa7.79□□□□□ -1.16
CCDC38-208ENST00000549876 REV1Q9UBZ9 1251 aa7.79□□□□□ -1.16
CCDC38-208ENST00000549876 PARP2Q9UGN5 583 aa7.79□□□□□ -1.16
CCDC38-208ENST00000549876 GPR160Q9UJ42 338 aa7.79□□□□□ -1.16
CCDC38-208ENST00000549876 BPNT1O95861 308 aa7.78□□□□□ -1.16
CCDC38-208ENST00000549876 F13A1P00488 732 aa7.78□□□□□ -1.16
CCDC38-208ENST00000549876 PF4P02776 101 aa7.78□□□□□ -1.16
CCDC38-208ENST00000549876 DIEXFQ68CQ4 756 aaKnown RBP7.78□□□□□ -1.16
CCDC38-208ENST00000549876 SYTL4Q96C24 671 aaPredicted RBP7.78□□□□□ -1.16
CCDC38-208ENST00000549876 CCDC74BQ96LY2 380 aa7.78□□□□□ -1.16
CCDC38-208ENST00000549876 POLR3KQ9Y2Y1 108 aaPredicted RBP7.78□□□□□ -1.16
CCDC38-208ENST00000549876 EFEMP2O95967 443 aa7.77□□□□□ -1.17
CCDC38-208ENST00000549876 PDE6BP35913 854 aa7.77□□□□□ -1.17
CCDC38-208ENST00000549876 TNNI2P48788 182 aa7.77□□□□□ -1.17
CCDC38-208ENST00000549876 DNAJC14Q6Y2X3 702 aaPredicted RBP7.77□□□□□ -1.17
CCDC38-208ENST00000549876 RHOVQ96L33 236 aa7.77□□□□□ -1.17
CCDC38-208ENST00000549876 SGPP1Q9BX95 441 aa7.77□□□□□ -1.17
CCDC38-208ENST00000549876 CNOT6Q9ULM6 557 aaKnown RBP7.77□□□□□ -1.17
CCDC38-208ENST00000549876 F6X3S4 739 aa7.76□□□□□ -1.17
CCDC38-208ENST00000549876 DNAJA2O60884 412 aa7.76□□□□□ -1.17
CCDC38-208ENST00000549876 GALK1P51570 392 aa7.76□□□□□ -1.17
CCDC38-208ENST00000549876 NLRX1Q86UT6 975 aa7.76□□□□□ -1.17
CCDC38-208ENST00000549876 HTR3BO95264 441 aa7.75□□□□□ -1.17
CCDC38-208ENST00000549876 BMP7P18075 431 aa7.75□□□□□ -1.17
CCDC38-208ENST00000549876 PSMD2Q13200 908 aa7.75□□□□□ -1.17
CCDC38-208ENST00000549876 TMEM132EQ6IEE7 984 aa7.75□□□□□ -1.17
CCDC38-208ENST00000549876 ENOX1Q8TC92 643 aaKnown RBP7.75□□□□□ -1.17
CCDC38-208ENST00000549876 KCNC2Q96PR1 638 aa7.75□□□□□ -1.17
CCDC38-208ENST00000549876 KLHL3Q9UH77 587 aa7.75□□□□□ -1.17
CCDC38-208ENST00000549876 KCTD3Q9Y597 815 aa7.75□□□□□ -1.17
CCDC38-208ENST00000549876 CLEC16AQ2KHT3 1053 aa7.74□□□□□ -1.17
CCDC38-208ENST00000549876 ZNF385BQ569K4 471 aa7.74□□□□□ -1.17
CCDC38-208ENST00000549876 TMC4Q7Z404 712 aa7.74□□□□□ -1.17
CCDC38-208ENST00000549876 USHBP1Q8N6Y0 703 aa7.74□□□□□ -1.17
CCDC38-208ENST00000549876 SYTL5Q8TDW5 730 aaPredicted RBP7.74□□□□□ -1.17
CCDC38-208ENST00000549876 RELTQ969Z4 430 aa7.74□□□□□ -1.17
CCDC38-208ENST00000549876 KIF2CQ99661 725 aa7.74□□□□□ -1.17
CCDC38-208ENST00000549876 HDAC8Q9BY41 377 aa7.74□□□□□ -1.17
CCDC38-208ENST00000549876 A0A0G2JLL6 359 aaPredicted RBP7.73□□□□□ -1.17
CCDC38-208ENST00000549876 OR14I1A6ND48 311 aa7.73□□□□□ -1.17
CCDC38-208ENST00000549876 GRIN3BO60391 1043 aa7.73□□□□□ -1.17
CCDC38-208ENST00000549876 SSPNQ14714 243 aa7.73□□□□□ -1.17
CCDC38-208ENST00000549876 TCERG1LQ5VWI1 586 aa7.73□□□□□ -1.17
CCDC38-208ENST00000549876 RNF111Q6ZNA4 994 aa7.73□□□□□ -1.17
CCDC38-208ENST00000549876 MARCH10Q8NA82 808 aaPredicted RBP7.73□□□□□ -1.17
CCDC38-208ENST00000549876 TMEM74Q96NL1 305 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms