RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 XAGE3Q8WTP9 111 aa6.52□□□□□ -1.37
SNRPF-202ENST00000549580 RNF32Q9H0A6 362 aa6.52□□□□□ -1.37
SNRPF-202ENST00000549580 C19orf44Q9H6X5 657 aa6.52□□□□□ -1.37
SNRPF-202ENST00000549580 CCSER2Q9H7U1 834 aa6.52□□□□□ -1.37
SNRPF-202ENST00000549580 DDX41Q9UJV9 622 aaKnown RBP6.52□□□□□ -1.37
SNRPF-202ENST00000549580 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.52□□□□□ -1.37
SNRPF-202ENST00000549580 TRIM37O94972 964 aa6.51□□□□□ -1.37
SNRPF-202ENST00000549580 XRCC5P13010 732 aaKnown RBP6.51□□□□□ -1.37
SNRPF-202ENST00000549580 TNK2Q07912 1038 aa6.51□□□□□ -1.37
SNRPF-202ENST00000549580 TAF1CQ15572 869 aaPredicted RBP6.51□□□□□ -1.37
SNRPF-202ENST00000549580 ZNF507Q8TCN5 953 aa6.51□□□□□ -1.37
SNRPF-202ENST00000549580 UBXN4Q92575 508 aa6.51□□□□□ -1.37
SNRPF-202ENST00000549580 ELMO3Q96BJ8 720 aa6.51□□□□□ -1.37
SNRPF-202ENST00000549580 SP110Q9HB58 689 aa6.51□□□□□ -1.37
SNRPF-202ENST00000549580 SEMA7AO75326 666 aa6.5□□□□□ -1.37
SNRPF-202ENST00000549580 USP17L7P0C7H9 530 aa6.5□□□□□ -1.37
SNRPF-202ENST00000549580 CDK8P49336 464 aa6.5□□□□□ -1.37
SNRPF-202ENST00000549580 RACK1P63244 317 aaKnown RBP6.5□□□□□ -1.37
SNRPF-202ENST00000549580 THAP5Q7Z6K1 395 aa6.5□□□□□ -1.37
SNRPF-202ENST00000549580 ACBD3Q9H3P7 528 aa6.5□□□□□ -1.37
SNRPF-202ENST00000549580 GCM1Q9NP62 436 aa6.5□□□□□ -1.37
SNRPF-202ENST00000549580 TMEM59LQ9UK28 342 aa6.5□□□□□ -1.37
SNRPF-202ENST00000549580 CNOT6Q9ULM6 557 aaKnown RBP6.5□□□□□ -1.37
SNRPF-202ENST00000549580 OTOL1A6NHN0 477 aaPredicted RBP6.49□□□□□ -1.37
SNRPF-202ENST00000549580 PEX10O60683 326 aa6.49□□□□□ -1.37
SNRPF-202ENST00000549580 ZXDCQ2QGD7 858 aaPredicted RBP6.49□□□□□ -1.37
SNRPF-202ENST00000549580 MEI1Q5TIA1 1274 aa6.49□□□□□ -1.37
SNRPF-202ENST00000549580 LLGL2Q6P1M3 1020 aa6.49□□□□□ -1.37
SNRPF-202ENST00000549580 LETMD1Q6P1Q0 360 aa6.49□□□□□ -1.37
SNRPF-202ENST00000549580 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.49□□□□□ -1.37
SNRPF-202ENST00000549580 CDH24Q86UP0 819 aa6.49□□□□□ -1.37
SNRPF-202ENST00000549580 IRF2BP1Q8IU81 584 aa6.49□□□□□ -1.37
SNRPF-202ENST00000549580 ZNF654Q8IZM8 581 aa6.49□□□□□ -1.37
SNRPF-202ENST00000549580 KCT2Q8NC54 265 aa6.49□□□□□ -1.37
SNRPF-202ENST00000549580 GMLQ99445 158 aa6.49□□□□□ -1.37
SNRPF-202ENST00000549580 KCTD3Q9Y597 815 aa6.49□□□□□ -1.37
SNRPF-202ENST00000549580 TIGD5Q53EQ6 642 aa6.48□□□□□ -1.37
SNRPF-202ENST00000549580 ZNF394Q53GI3 561 aa6.48□□□□□ -1.37
SNRPF-202ENST00000549580 ZNF385BQ569K4 471 aa6.48□□□□□ -1.37
SNRPF-202ENST00000549580 HS2ST1Q7LGA3 356 aa6.48□□□□□ -1.37
SNRPF-202ENST00000549580 ERMP1Q7Z2K6 904 aa6.48□□□□□ -1.37
SNRPF-202ENST00000549580 ANKRD24Q8TF21 1146 aa6.48□□□□□ -1.37
SNRPF-202ENST00000549580 PLPPR2Q96GM1 343 aa6.48□□□□□ -1.37
SNRPF-202ENST00000549580 SGPP1Q9BX95 441 aa6.48□□□□□ -1.37
SNRPF-202ENST00000549580 CAPN10Q9HC96 672 aa6.48□□□□□ -1.37
SNRPF-202ENST00000549580 GSTT1P30711 240 aa6.47□□□□□ -1.37
SNRPF-202ENST00000549580 TNNI2P48788 182 aa6.47□□□□□ -1.37
SNRPF-202ENST00000549580 EFEMP1Q12805 493 aa6.47□□□□□ -1.37
SNRPF-202ENST00000549580 PRAMEF13Q5VWM6 474 aa6.47□□□□□ -1.37
SNRPF-202ENST00000549580 ZNF605Q86T29 641 aa6.47□□□□□ -1.37
SNRPF-202ENST00000549580 USP48Q86UV5 1035 aa6.47□□□□□ -1.37
SNRPF-202ENST00000549580 CREG2Q8IUH2 290 aa6.47□□□□□ -1.37
SNRPF-202ENST00000549580 GGT7Q9UJ14 662 aa6.47□□□□□ -1.37
SNRPF-202ENST00000549580 CELA3AP09093 270 aa6.46□□□□□ -1.38
SNRPF-202ENST00000549580 GNL2Q13823 731 aaKnown RBP6.46□□□□□ -1.38
SNRPF-202ENST00000549580 SSPNQ14714 243 aa6.46□□□□□ -1.38
SNRPF-202ENST00000549580 TMEM151BQ8IW70 566 aa6.46□□□□□ -1.38
SNRPF-202ENST00000549580 NOC4LQ9BVI4 516 aaKnown RBP6.46□□□□□ -1.38
SNRPF-202ENST00000549580 WNT10AQ9GZT5 417 aa6.46□□□□□ -1.38
SNRPF-202ENST00000549580 PCDHGB7Q9Y5F8 929 aa6.46□□□□□ -1.38
SNRPF-202ENST00000549580 TEX51A0A1B0GUA7 166 aa6.45□□□□□ -1.38
SNRPF-202ENST00000549580 GALK1P51570 392 aa6.45□□□□□ -1.38
SNRPF-202ENST00000549580 ETF1P62495 437 aaKnown RBP6.45□□□□□ -1.38
SNRPF-202ENST00000549580 MFSD2AQ8NA29 543 aa6.45□□□□□ -1.38
SNRPF-202ENST00000549580 ARMC5Q96C12 935 aa6.45□□□□□ -1.38
SNRPF-202ENST00000549580 DPH2Q9BQC3 489 aaPredicted RBP6.45□□□□□ -1.38
SNRPF-202ENST00000549580 TANGO6Q9C0B7 1094 aa6.45□□□□□ -1.38
SNRPF-202ENST00000549580 PPP1R1BQ9UD71 204 aaPredicted RBP6.45□□□□□ -1.38
SNRPF-202ENST00000549580 RFXAPO00287 272 aa6.44□□□□□ -1.38
SNRPF-202ENST00000549580 SASH1O94885 1247 aa6.44□□□□□ -1.38
SNRPF-202ENST00000549580 GJA8P48165 433 aa6.44□□□□□ -1.38
SNRPF-202ENST00000549580 PCNX4Q63HM2 1172 aa6.44□□□□□ -1.38
SNRPF-202ENST00000549580 RSRP1Q9BUV0 290 aa6.44□□□□□ -1.38
SNRPF-202ENST00000549580 SLC6A17Q9H1V8 727 aa6.44□□□□□ -1.38
SNRPF-202ENST00000549580 COPRSQ9NQ92 184 aa6.44□□□□□ -1.38
SNRPF-202ENST00000549580 PPM1HQ9ULR3 514 aa6.44□□□□□ -1.38
SNRPF-202ENST00000549580 INPP5FQ9Y2H2 1132 aa6.44□□□□□ -1.38
SNRPF-202ENST00000549580 SAMM50Q9Y512 469 aa6.44□□□□□ -1.38
SNRPF-202ENST00000549580 SUV39H1O43463 412 aa6.43□□□□□ -1.38
SNRPF-202ENST00000549580 LRRC14Q15048 493 aa6.43□□□□□ -1.38
SNRPF-202ENST00000549580 SPATS1Q496A3 300 aa6.43□□□□□ -1.38
SNRPF-202ENST00000549580 ERICH6BQ5W0A0 696 aa6.43□□□□□ -1.38
SNRPF-202ENST00000549580 FEZF2Q8TBJ5 459 aa6.43□□□□□ -1.38
SNRPF-202ENST00000549580 PANK1Q8TE04 598 aa6.43□□□□□ -1.38
SNRPF-202ENST00000549580 Q96M66 194 aa6.43□□□□□ -1.38
SNRPF-202ENST00000549580 DUSP15Q9H1R2 295 aaPredicted RBP6.43□□□□□ -1.38
SNRPF-202ENST00000549580 ZNF552Q9H707 407 aaPredicted RBP6.43□□□□□ -1.38
SNRPF-202ENST00000549580 CST3P01034 146 aaPredicted RBP6.42□□□□□ -1.38
SNRPF-202ENST00000549580 ATP2B1P20020 1258 aa6.42□□□□□ -1.38
SNRPF-202ENST00000549580 TPP2P29144 1249 aaPredicted RBP6.42□□□□□ -1.38
SNRPF-202ENST00000549580 GRK4P32298 578 aa6.42□□□□□ -1.38
SNRPF-202ENST00000549580 CAP2P40123 477 aa6.42□□□□□ -1.38
SNRPF-202ENST00000549580 ARID5AQ03989 594 aa6.42□□□□□ -1.38
SNRPF-202ENST00000549580 WIPI1Q5MNZ9 446 aaPredicted RBP6.42□□□□□ -1.38
SNRPF-202ENST00000549580 TMPRSS7Q7RTY8 843 aa6.42□□□□□ -1.38
SNRPF-202ENST00000549580 HDXQ7Z353 690 aa6.42□□□□□ -1.38
SNRPF-202ENST00000549580 HID1Q8IV36 788 aa6.42□□□□□ -1.38
SNRPF-202ENST00000549580 GAL3ST3Q96A11 431 aa6.42□□□□□ -1.38
SNRPF-202ENST00000549580 CEP44Q9C0F1 390 aa6.42□□□□□ -1.38
SNRPF-202ENST00000549580 ZGLP1P0C6A0 271 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms