RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 RAG1P15918 1043 aa13.24□□□□□ -0.29
TRAFD1-206ENST00000549358 DYNLL1P63167 89 aaKnown RBP13.24□□□□□ -0.29
TRAFD1-206ENST00000549358 LRRC41Q15345 812 aa13.24□□□□□ -0.29
TRAFD1-206ENST00000549358 PPM1EQ8WY54 764 aa13.24□□□□□ -0.29
TRAFD1-206ENST00000549358 MOV10L1Q9BXT6 1211 aaKnown RBP13.24□□□□□ -0.29
TRAFD1-206ENST00000549358 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.23□□□□□ -0.29
TRAFD1-206ENST00000549358 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.23□□□□□ -0.29
TRAFD1-206ENST00000549358 COBLO75128 1261 aa13.23□□□□□ -0.29
TRAFD1-206ENST00000549358 CLTBP09497 229 aa13.23□□□□□ -0.29
TRAFD1-206ENST00000549358 DNAJB2P25686 324 aa13.23□□□□□ -0.29
TRAFD1-206ENST00000549358 ABCB5Q2M3G0 1257 aa13.23□□□□□ -0.29
TRAFD1-206ENST00000549358 ZNF576Q9H609 170 aa13.23□□□□□ -0.29
TRAFD1-206ENST00000549358 RLFQ13129 1914 aa13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 PQBP1O60828 265 aaKnown RBP13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 CYP2E1P05181 493 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 ERCC3P19447 782 aa13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 FPGSQ05932 587 aa13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 G3BP1Q13283 466 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 COG2Q14746 738 aa13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 CERKLQ49MI3 558 aaPredicted RBP13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 FAM47AQ5JRC9 791 aa13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 TTC39AQ5SRH9 613 aa13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 API5Q9BZZ5 524 aaKnown RBP13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 HOXC10Q9NYD6 342 aa13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 SERPINB13Q9UIV8 391 aa13.22□□□□□ -0.29
TRAFD1-206ENST00000549358 KIAA0355O15063 1070 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 GNAI3P08754 354 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 USP5P45974 858 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 SLFN5Q08AF3 891 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 MTX1Q13505 466 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 CCDC158Q5M9N0 1113 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 ATXN2LQ8WWM7 1075 aaKnown RBP13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 TIFAQ96CG3 184 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 ASB2Q96Q27 587 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 SPATC1LQ9H0A9 340 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 CABP5Q9NP86 173 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 XPNPEP3Q9NQH7 507 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 TMEM39AQ9NV64 488 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 SLC5A4Q9NY91 659 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 PHF24Q9UPV7 400 aa13.21□□□□□ -0.29
TRAFD1-206ENST00000549358 PGK1P00558 417 aa13.2□□□□□ -0.3
TRAFD1-206ENST00000549358 CYP7A1P22680 504 aa13.2□□□□□ -0.3
TRAFD1-206ENST00000549358 PLS1Q14651 629 aa13.2□□□□□ -0.3
TRAFD1-206ENST00000549358 MIGA1Q8NAN2 632 aa13.2□□□□□ -0.3
TRAFD1-206ENST00000549358 FAM122AQ96E09 287 aa13.2□□□□□ -0.3
TRAFD1-206ENST00000549358 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
TRAFD1-206ENST00000549358 MAML3Q96JK9 1138 aa13.2□□□□□ -0.3
TRAFD1-206ENST00000549358 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
TRAFD1-206ENST00000549358 EHD4Q9H223 541 aa13.2□□□□□ -0.3
TRAFD1-206ENST00000549358 PIH1D3Q9NQM4 214 aaKnown RBP13.2□□□□□ -0.3
TRAFD1-206ENST00000549358 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 RARBP10826 455 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 PLA2G5P39877 138 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 ZAP70P43403 619 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 RNF180Q86T96 592 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 TTC6Q86TZ1 520 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 NCAPG2Q86XI2 1143 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 SHCBP1Q8NEM2 672 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 ADAMTS19Q8TE59 1207 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 GAS2L1Q99501 681 aaPredicted RBP13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 DBNDD2Q9BQY9 259 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 PRDM12Q9H4Q4 367 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 MROH8Q9H579 483 aa13.19□□□□□ -0.3
TRAFD1-206ENST00000549358 PNMA6EA0A0J9YXQ4 647 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 A0A1W2PQ45 241 aaPredicted RBP13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 A0A1W2PQY0 241 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 A0A1W2PRG0 241 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 GUCY1A2P33402 732 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 SHMT1P34896 483 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 PBX2P40425 430 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 PLCD1P51178 756 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 FAAP100Q0VG06 881 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 SEPT2Q15019 361 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 CCDC85BQ15834 202 aaPredicted RBP13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 SLC44A5Q8NCS7 719 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 THEGQ9P2T0 379 aa13.18□□□□□ -0.3
TRAFD1-206ENST00000549358 GRXCR1A8MXD5 290 aa13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 DCDC2CA8MYV0 355 aa13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 IDH1O75874 414 aaKnown RBP13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 FCER1AP12319 257 aa13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 MRPS5P82675 430 aaKnown RBP13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 MAP3K12Q12852 859 aa13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 TNNI3KQ59H18 835 aa13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 ABRAQ8N0Z2 381 aa13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 UHRF1Q96T88 793 aaPredicted RBP13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 PBX4Q9BYU1 374 aa13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 FPGT-TNNI3KV9GXZ4 949 aa13.17□□□□□ -0.3
TRAFD1-206ENST00000549358 IGSF3O75054 1194 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 TIMP1P01033 207 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 GNAI2P04899 355 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 POLR3DP05423 398 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 PGK2P07205 417 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 TAL1P17542 331 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 IGFBP4P22692 258 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 AKNAD1Q5T1N1 836 aa13.16□□□□□ -0.3
TRAFD1-206ENST00000549358 C16orf59Q7L2K0 433 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms