RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 NUP153P49790 1475 aaKnown RBP3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 PLB1Q6P1J6 1458 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 MRC2Q9UBG0 1479 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 KIF14Q15058 1648 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 BCORL1Q5H9F3 1711 aa3.33□□□□□ -1.88
DEPDC4-206ENST00000549100 DYNC1LI2O43237 492 aaPredicted RBP3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 GREM1O60565 184 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 ECEL1O95672 775 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 GLI1P08151 1106 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 FGRP09769 529 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 RLBP1P12271 317 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 ATF4P18848 351 aaPredicted RBP3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 NME2P22392 152 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 RPS26P62854 115 aaKnown RBP3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 LMNB2Q03252 620 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 PTPN11Q06124 597 aaPredicted RBP3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 PPP2R3AQ06190 1150 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 ZNF252P-AS1Q0IIN9 211 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 GNL2Q13823 731 aaKnown RBP3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 SEPT6Q14141 434 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 MPZL3Q6UWV2 235 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 PDZD3Q86UT5 571 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 MCF2L2Q86YR7 1114 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 MARCH10Q8NA82 808 aaPredicted RBP3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 GOLM1Q8NBJ4 401 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 FBXO27Q8NI29 283 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 RASGRP4Q8TDF6 673 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 SLC7A3Q8WY07 619 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 DHX38Q92620 1227 aaKnown RBP3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 GAL3ST3Q96A11 431 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 MPHOSPH9Q99550 1183 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 NRSN2Q9GZP1 204 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 NSUN3Q9H649 340 aaKnown RBP3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 SUGCTQ9HAC7 445 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 C1GALT1Q9NS00 363 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 WASHC2AQ641Q2 1341 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 MTUS2Q5JR59 1369 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 HFM1A2PYH4 1435 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 UACAQ9BZF9 1416 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 EIF4G3O43432 1585 aaKnown RBP3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 IQGAP2Q13576 1575 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 ERCC6L2Q5T890 1561 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 KIAA0556O60303 1618 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 GCC2Q8IWJ2 1684 aa3.32□□□□□ -1.88
DEPDC4-206ENST00000549100 EHBP1L1Q8N3D4 1523 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 PZPP20742 1482 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 FMN1Q68DA7 1419 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 F13A1P00488 732 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 CTSBP07858 339 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 CELA3BP08861 270 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 ARNTP27540 789 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 NASPP49321 788 aaPredicted RBP3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 CABP4P57796 275 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 PIP4K2BP78356 416 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 IRX6P78412 446 aaPredicted RBP3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 CYP27A1Q02318 531 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 GSTM4Q03013 218 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 ARID5AQ03989 594 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 PRKCQQ04759 706 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 SNAP47Q5SQN1 464 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 LLGL2Q6P1M3 1020 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 SLC23A3Q6PIS1 610 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 SEZ6L2Q6UXD5 910 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 FAM196AQ6ZSG2 479 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 UBXN4Q92575 508 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 BORCS6Q96GS4 357 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 NT5C1AQ9BXI3 368 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 ZC3H12CQ9C0D7 883 aaKnown RBP3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 XYLT2Q9H1B5 865 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 SOX17Q9H6I2 414 aaPredicted RBP3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 CBX8Q9HC52 389 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 GINM1Q9NU53 330 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 VAV3Q9UKW4 847 aa3.31□□□□□ -1.88
DEPDC4-206ENST00000549100 RAPGEF6Q8TEU7 1601 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 GRIN2AQ12879 1464 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 DAPK1P53355 1430 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 ANKRD30BQ9BXX2 1392 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 FAM221AA4D161 298 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 TCAF2A6NFQ2 919 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 FAM177BA6PVY3 158 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 TLR3O15455 904 aaKnown RBP3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 TRIM13O60858 407 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 GSTP1P09211 210 aaKnown RBP3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 ATP2B1P20020 1258 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 TGM1P22735 817 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 GTF2F1P35269 517 aaKnown RBP eCLIP3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 CDK8P49336 464 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 APOBRQ0VD83 1088 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 C19orf57Q0VDD7 668 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 AP3B2Q13367 1082 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 AOC3Q16853 763 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 MAP1SQ66K74 1059 aaPredicted RBP3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 OGFOD3Q6PK18 319 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 NETO1Q8TDF5 533 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 GATAD2BQ8WXI9 593 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 JARID2Q92833 1246 aaPredicted RBP3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 KCNB2Q92953 911 aa3.3□□□□□ -1.88
DEPDC4-206ENST00000549100 DNAJC2Q99543 621 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms