RNA–Protein interactions for RNA: ENST00000547923.1

TROAP-206, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TROAP, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-206ENST00000547923 USP17L18D6R9N7 530 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 USP17L22D6RA61 530 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 USP17L17D6RBQ6 530 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 USP17L19D6RCP7 530 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 USP17L20D6RJB6 530 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 TTLL1O95922 423 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 PTH1RQ03431 593 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 USP17L24Q0WX57 530 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 ARHGEF6Q15052 776 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 NOM1Q5C9Z4 860 aaKnown RBP11.88□□□□□ -0.51
TROAP-206ENST00000547923 CTU1Q7Z7A3 348 aaKnown RBP11.88□□□□□ -0.51
TROAP-206ENST00000547923 SIAH1Q8IUQ4 282 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 LRRC47Q8N1G4 583 aaKnown RBP11.88□□□□□ -0.51
TROAP-206ENST00000547923 NEDD1Q8NHV4 660 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 STAG1Q8WVM7 1258 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 LPAR1Q92633 364 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 ESR2Q92731 530 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 CHMP4CQ96CF2 233 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 C12orf42Q96LP6 360 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 PAGR1Q9BTK6 254 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.88□□□□□ -0.51
TROAP-206ENST00000547923 VCPKMTQ9H867 229 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 MTMR7Q9Y216 660 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 TRIM17Q9Y577 477 aa11.88□□□□□ -0.51
TROAP-206ENST00000547923 U3KPZ7 1027 aaPredicted RBP11.88□□□□□ -0.51
TROAP-206ENST00000547923 ORC4O43929 436 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 NMT2O60551 498 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 PCP11498 1178 aaKnown RBP11.87□□□□□ -0.51
TROAP-206ENST00000547923 TRDNQ13061 729 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 PPP4R3BQ5MIZ7 849 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 C17orf99Q6UX52 265 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 CCAR1Q8IX12 1150 aaKnown RBP11.87□□□□□ -0.51
TROAP-206ENST00000547923 MTMR4Q9NYA4 1195 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 NYAP2Q9P242 653 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 NEDD4P46934 1319 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 FLOT1O75955 427 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
TROAP-206ENST00000547923 HOXA7P31268 230 aaPredicted RBP11.87□□□□□ -0.51
TROAP-206ENST00000547923 GCLCP48506 637 aaPredicted RBP11.87□□□□□ -0.51
TROAP-206ENST00000547923 HERVK_113P62684 666 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 LACTBP83111 547 aaPredicted RBP11.87□□□□□ -0.51
TROAP-206ENST00000547923 P2RX7Q99572 595 aaKnown RBP11.87□□□□□ -0.51
TROAP-206ENST00000547923 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 EFCC1Q9HA90 598 aa11.87□□□□□ -0.51
TROAP-206ENST00000547923 B4E1Z4 1266 aa11.86□□□□□ -0.51
TROAP-206ENST00000547923 F5H6K3 240 aa11.86□□□□□ -0.51
TROAP-206ENST00000547923 WDR46O15213 610 aaKnown RBP11.86□□□□□ -0.51
TROAP-206ENST00000547923 KDM4AO75164 1064 aa11.86□□□□□ -0.51
TROAP-206ENST00000547923 KLRC3Q07444 240 aa11.86□□□□□ -0.51
TROAP-206ENST00000547923 FAM83BQ5T0W9 1011 aa11.86□□□□□ -0.51
TROAP-206ENST00000547923 RALYLQ86SE5 291 aaKnown RBP11.86□□□□□ -0.51
TROAP-206ENST00000547923 IQCA1Q86XH1 822 aa11.86□□□□□ -0.51
TROAP-206ENST00000547923 ZKSCAN3Q9BRR0 538 aa11.86□□□□□ -0.51
TROAP-206ENST00000547923 CNNM2Q9H8M5 875 aa11.86□□□□□ -0.51
TROAP-206ENST00000547923 CWC22Q9HCG8 908 aaKnown RBP11.86□□□□□ -0.51
TROAP-206ENST00000547923 RBM8AQ9Y5S9 174 aaKnown RBP11.86□□□□□ -0.51
TROAP-206ENST00000547923 PLIN4Q96Q06 1357 aa11.86□□□□□ -0.51
TROAP-206ENST00000547923 LOC285556D6RIA3 1793 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 IGKV6D-41A0A0C4DH26 115 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 NDUFB10O96000 172 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 CYP21A2P08686 494 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 FGRP09769 529 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 BCRP11274 1271 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 PSMC4P43686 418 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 IKQ13123 557 aaPredicted RBP11.85□□□□□ -0.51
TROAP-206ENST00000547923 FAM110CQ1W6H9 321 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 KIAA1755Q5JYT7 1200 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 WDR78Q5VTH9 848 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 CATSPERGQ6ZRH7 1159 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 NUP88Q99567 741 aaPredicted RBP11.85□□□□□ -0.51
TROAP-206ENST00000547923 UBAC1Q9BSL1 405 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 KRT23Q9C075 422 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 ARHGAP39Q9C0H5 1083 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 MCOLN1Q9GZU1 580 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 ADGRA2Q96PE1 1338 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 HTTP42858 3142 aa11.85□□□□□ -0.51
TROAP-206ENST00000547923 TNPO2O14787 897 aaKnown RBP11.84□□□□□ -0.51
TROAP-206ENST00000547923 ATXN8OSP0DMR3 200 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 FCGRTP55899 365 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 COG2Q14746 738 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 OTOP1Q7RTM1 612 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 GPRC5AQ8NFJ5 357 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 GTF3C2Q8WUA4 911 aaPredicted RBP11.84□□□□□ -0.51
TROAP-206ENST00000547923 MAP4K1Q92918 833 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 IL17RBQ9NRM6 502 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 HOXC10Q9NYD6 342 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 GREB1LQ9C091 1923 aaPredicted RBP11.84□□□□□ -0.51
TROAP-206ENST00000547923 PEX10O60683 326 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 SLC1A4P43007 532 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 PLS1Q14651 629 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 CCDC96Q2M329 555 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 SLFN13Q68D06 897 aa11.84□□□□□ -0.51
TROAP-206ENST00000547923 LSG1Q9H089 658 aaKnown RBP11.84□□□□□ -0.51
TROAP-206ENST00000547923 CTDP1Q9Y5B0 961 aaPredicted RBP11.84□□□□□ -0.51
TROAP-206ENST00000547923 SPDYE16A6NNV3 312 aaPredicted RBP11.83□□□□□ -0.52
TROAP-206ENST00000547923 MCCP23508 829 aa11.83□□□□□ -0.52
TROAP-206ENST00000547923 HOXD10P28358 340 aa11.83□□□□□ -0.52
TROAP-206ENST00000547923 CAP1Q01518 475 aa11.83□□□□□ -0.52
TROAP-206ENST00000547923 PKN2Q16513 984 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms