RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 IL25Q9H293 177 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 EFCC1Q9HA90 598 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 NYAP2Q9P242 653 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 TRIM17Q9Y577 477 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 TACC3Q9Y6A5 838 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 GNRH1P01148 92 aa12.18□□□□□ -0.46
LINC02409-201ENST00000547515 CTGFP29279 349 aa12.18□□□□□ -0.46
LINC02409-201ENST00000547515 HERVK_113P62684 666 aa12.18□□□□□ -0.46
LINC02409-201ENST00000547515 BMP2KLQ5H9B9 411 aa12.18□□□□□ -0.46
LINC02409-201ENST00000547515 KIAA1755Q5JYT7 1200 aa12.18□□□□□ -0.46
LINC02409-201ENST00000547515 CATSPERGQ6ZRH7 1159 aa12.18□□□□□ -0.46
LINC02409-201ENST00000547515 GTF3C2Q8WUA4 911 aaPredicted RBP12.18□□□□□ -0.46
LINC02409-201ENST00000547515 RUFY2Q8WXA3 655 aa12.18□□□□□ -0.46
LINC02409-201ENST00000547515 LPAR1Q92633 364 aa12.18□□□□□ -0.46
LINC02409-201ENST00000547515 ARHGAP39Q9C0H5 1083 aa12.18□□□□□ -0.46
LINC02409-201ENST00000547515 VCPKMTQ9H867 229 aa12.18□□□□□ -0.46
LINC02409-201ENST00000547515 MORF4L1Q9UBU8 362 aa12.18□□□□□ -0.46
LINC02409-201ENST00000547515 RBBP6Q7Z6E9 1792 aaKnown RBP12.18□□□□□ -0.46
LINC02409-201ENST00000547515 TSPY3P0CV98 308 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 TSPY8P0CW00 308 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 PCP11498 1178 aaKnown RBP12.17□□□□□ -0.46
LINC02409-201ENST00000547515 PSMC4P43686 418 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 TFAP4Q01664 338 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 LBX2Q6XYB7 198 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 ANKRD13CQ8N6S4 541 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 MKL1Q969V6 931 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 CEP95Q96GE4 821 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 TRIM47Q96LD4 638 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 NBPF3Q9H094 633 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 RPAP3Q9H6T3 665 aaPredicted RBP12.17□□□□□ -0.46
LINC02409-201ENST00000547515 INCENPQ9NQS7 918 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 PPP4R2Q9NY27 417 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 MTMR4Q9NYA4 1195 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 SYNPO2Q9UMS6 1093 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 PTPN22Q9Y2R2 807 aa12.17□□□□□ -0.46
LINC02409-201ENST00000547515 SMCHD1A6NHR9 2005 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 MYH6P13533 1939 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 WDR46O15213 610 aaKnown RBP12.16□□□□□ -0.46
LINC02409-201ENST00000547515 SGSM2O43147 1006 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 PRMT2P55345 433 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 FCGRTP55899 365 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 HAND2P61296 217 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 ATP2B2Q01814 1243 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 FAM47AQ5JRC9 791 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 AKNAD1Q5T1N1 836 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 IFFO2Q5TF58 517 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 POTEEQ6S8J3 1075 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 TBC1D10CQ8IV04 446 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 STAG1Q8WVM7 1258 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 GOPCQ9HD26 462 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 TXNRD2Q9NNW7 524 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 RBPJLQ9UBG7 517 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 CTNNA3Q9UI47 895 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 HPS5Q9UPZ3 1129 aa12.16□□□□□ -0.46
LINC02409-201ENST00000547515 TSPY2A6NKD2 308 aa12.15□□□□□ -0.46
LINC02409-201ENST00000547515 SPDYE16A6NNV3 312 aaPredicted RBP12.15□□□□□ -0.46
LINC02409-201ENST00000547515 ZNF213O14771 459 aa12.15□□□□□ -0.46
LINC02409-201ENST00000547515 RANBP6O60518 1105 aaKnown RBP12.15□□□□□ -0.46
LINC02409-201ENST00000547515 TTLL1O95922 423 aa12.15□□□□□ -0.46
LINC02409-201ENST00000547515 HOXD10P28358 340 aa12.15□□□□□ -0.46
LINC02409-201ENST00000547515 NOVP48745 357 aa12.15□□□□□ -0.46
LINC02409-201ENST00000547515 NT5C2P49902 561 aa12.15□□□□□ -0.46
LINC02409-201ENST00000547515 SPICE1Q8N0Z3 855 aa12.15□□□□□ -0.46
LINC02409-201ENST00000547515 RNF41Q9H4P4 317 aaPredicted RBP12.15□□□□□ -0.46
LINC02409-201ENST00000547515 CLIP2Q9UDT6 1046 aa12.15□□□□□ -0.46
LINC02409-201ENST00000547515 SRRDQ9UH36 339 aa12.15□□□□□ -0.46
LINC02409-201ENST00000547515 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.46
LINC02409-201ENST00000547515 PLXNA1Q9UIW2 1896 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 MYPNQ86TC9 1320 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
LINC02409-201ENST00000547515 NDUFB10O96000 172 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 ERVK-9P63128 1117 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 ERVK-24P63145 666 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 COG2Q14746 738 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 IMMTQ16891 758 aaKnown RBP12.14□□□□□ -0.47
LINC02409-201ENST00000547515 MFSD6Q6ZSS7 791 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 GPRC5AQ8NFJ5 357 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 TANGO6Q9C0B7 1094 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 IL17RBQ9NRM6 502 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 TCP11L1Q9NUJ3 509 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 HOXC10Q9NYD6 342 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 HTTP42858 3142 aa12.14□□□□□ -0.47
LINC02409-201ENST00000547515 F5H6K3 240 aa12.13□□□□□ -0.47
LINC02409-201ENST00000547515 CNMDO75829 334 aa12.13□□□□□ -0.47
LINC02409-201ENST00000547515 ECM2O94769 699 aaPredicted RBP12.13□□□□□ -0.47
LINC02409-201ENST00000547515 DSG3P32926 999 aa12.13□□□□□ -0.47
LINC02409-201ENST00000547515 PTH1RQ03431 593 aa12.13□□□□□ -0.47
LINC02409-201ENST00000547515 KLRC3Q07444 240 aa12.13□□□□□ -0.47
LINC02409-201ENST00000547515 Q3C1V9 767 aa12.13□□□□□ -0.47
LINC02409-201ENST00000547515 RRP12Q5JTH9 1297 aaKnown RBP12.13□□□□□ -0.47
LINC02409-201ENST00000547515 LRRC47Q8N1G4 583 aaKnown RBP12.13□□□□□ -0.47
LINC02409-201ENST00000547515 GMCL1P1Q8NEA9 526 aa12.13□□□□□ -0.47
LINC02409-201ENST00000547515 ESYT1Q9BSJ8 1104 aa12.13□□□□□ -0.47
LINC02409-201ENST00000547515 TOMM22Q9NS69 142 aa12.13□□□□□ -0.47
LINC02409-201ENST00000547515 PTCH2Q9Y6C5 1203 aa12.13□□□□□ -0.47
LINC02409-201ENST00000547515 ZNF236Q9UL36 1845 aa12.13□□□□□ -0.47
LINC02409-201ENST00000547515 PDE4DIPQ5VU43 2346 aa12.12□□□□□ -0.47
LINC02409-201ENST00000547515 NEDD4P46934 1319 aa12.12□□□□□ -0.47
LINC02409-201ENST00000547515 TNPO2O14787 897 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms