RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 PLCH1Q4KWH8 1693 aa14.36□□□□□ -0.11
CACNB3-204ENST00000547230 PRDM1O75626 825 aa14.36□□□□□ -0.11
CACNB3-204ENST00000547230 IL2RBP14784 551 aa14.36□□□□□ -0.11
CACNB3-204ENST00000547230 KRT31Q15323 416 aa14.36□□□□□ -0.11
CACNB3-204ENST00000547230 PKN1Q16512 942 aa14.36□□□□□ -0.11
CACNB3-204ENST00000547230 NOM1Q5C9Z4 860 aaKnown RBP14.36□□□□□ -0.11
CACNB3-204ENST00000547230 ABHD10Q9NUJ1 306 aa14.36□□□□□ -0.11
CACNB3-204ENST00000547230 TRMT112Q9UI30 125 aaKnown RBP14.36□□□□□ -0.11
CACNB3-204ENST00000547230 COL5A2P05997 1499 aaPredicted RBP14.36□□□□□ -0.11
CACNB3-204ENST00000547230 ACTN2P35609 894 aa14.36□□□□□ -0.11
CACNB3-204ENST00000547230 RCAN1P53805 252 aa14.36□□□□□ -0.11
CACNB3-204ENST00000547230 NOA1Q8NC60 698 aaKnown RBP14.36□□□□□ -0.11
CACNB3-204ENST00000547230 RNF26Q9BY78 433 aaPredicted RBP14.36□□□□□ -0.11
CACNB3-204ENST00000547230 PRDM11Q9NQV5 511 aa14.36□□□□□ -0.11
CACNB3-204ENST00000547230 FAN1Q9Y2M0 1017 aa14.36□□□□□ -0.11
CACNB3-204ENST00000547230 NUP98P52948 1817 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 XDHP47989 1333 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 CTAGE15A4D2H0 777 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 CTAGE8P0CG41 777 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 KRT2P35908 639 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 WHAMMP3Q1A5X7 153 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 CTAGE6Q86UF2 777 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 TMTC1Q8IUR5 882 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 CTAGE4Q8IX94 777 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 MSL3Q8N5Y2 521 aaKnown RBP14.35□□□□□ -0.11
CACNB3-204ENST00000547230 IQUBQ8NA54 791 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 MIGA1Q8NAN2 632 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 PHF20Q9BVI0 1012 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 TRIM34Q9BYJ4 488 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 NACAP1Q9BZK3 213 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 CWC15Q9P013 229 aaKnown RBP14.35□□□□□ -0.11
CACNB3-204ENST00000547230 LIMA1Q9UHB6 759 aaKnown RBP14.35□□□□□ -0.11
CACNB3-204ENST00000547230 TNKSO95271 1327 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 PNPLA7Q6ZV29 1317 aa14.35□□□□□ -0.11
CACNB3-204ENST00000547230 SMIM22K7EJ46 135 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 PDE8AO60658 829 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 EIF3JO75822 258 aaKnown RBP14.34□□□□□ -0.11
CACNB3-204ENST00000547230 AMPD2Q01433 879 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 CASP8Q14790 479 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 SEC23AQ15436 765 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 TMTC2Q8N394 836 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 UBAC1Q9BSL1 405 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 VPS16Q9H269 839 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 BLZF1Q9H2G9 400 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 TAB2Q9NYJ8 693 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 NHSL1Q5SYE7 1610 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 STRCP1A6NGW2 1772 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 MYO1CO00159 1063 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 N4BP3O15049 544 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 SLC5A1P13866 664 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 PPARAQ07869 468 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 FUT2Q10981 343 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 ZNF174Q15697 407 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 NCAPH2Q6IBW4 605 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 FERMT2Q96AC1 680 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 SLF1Q9BQI6 1058 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 MTA3Q9BTC8 594 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 MROH5Q6ZUA9 1318 aa14.34□□□□□ -0.11
CACNB3-204ENST00000547230 TRIM66O15016 1216 aa14.33□□□□□ -0.11
CACNB3-204ENST00000547230 PLEKHA8P1O95397 391 aa14.33□□□□□ -0.11
CACNB3-204ENST00000547230 GNAT2P19087 354 aa14.33□□□□□ -0.11
CACNB3-204ENST00000547230 COPB1P53618 953 aaKnown RBP14.33□□□□□ -0.11
CACNB3-204ENST00000547230 AKAP17AQ02040 695 aaKnown RBP14.33□□□□□ -0.11
CACNB3-204ENST00000547230 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.11
CACNB3-204ENST00000547230 CYP26C1Q6V0L0 522 aa14.33□□□□□ -0.11
CACNB3-204ENST00000547230 RTL9Q8NET4 1388 aa14.33□□□□□ -0.12
CACNB3-204ENST00000547230 STARD3NLO95772 234 aa14.33□□□□□ -0.12
CACNB3-204ENST00000547230 DCCP43146 1447 aa14.33□□□□□ -0.12
CACNB3-204ENST00000547230 TUBB4BP68371 445 aa14.33□□□□□ -0.12
CACNB3-204ENST00000547230 E2F4Q16254 413 aa14.33□□□□□ -0.12
CACNB3-204ENST00000547230 RRAGBQ5VZM2 374 aa14.33□□□□□ -0.12
CACNB3-204ENST00000547230 SRLQ86TD4 932 aa14.33□□□□□ -0.12
CACNB3-204ENST00000547230 PIGBQ92521 554 aa14.33□□□□□ -0.12
CACNB3-204ENST00000547230 NUP88Q99567 741 aaPredicted RBP14.33□□□□□ -0.12
CACNB3-204ENST00000547230 RNF41Q9H4P4 317 aaPredicted RBP14.33□□□□□ -0.12
CACNB3-204ENST00000547230 SLIT2O94813 1529 aa14.33□□□□□ -0.12
CACNB3-204ENST00000547230 LRRIQ3A6PVS8 624 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-204ENST00000547230 XBP1P17861 261 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 PIP4K2BP78356 416 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 NPY5RQ15761 445 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 TNFRSF25Q93038 417 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 ZFP91Q96JP5 570 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-204ENST00000547230 MYO1AQ9UBC5 1043 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 TRIM10Q9UDY6 481 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 MYO6Q9UM54 1294 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 REXO2Q9Y3B8 237 aaKnown RBP14.32□□□□□ -0.12
CACNB3-204ENST00000547230 LRRC10BA6NIK2 292 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 TTC38Q5R3I4 469 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 LEKR1Q6ZMV7 388 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 C10orf67Q8IYJ2 551 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 SDR42E1Q8WUS8 393 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 CHP1Q99653 195 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 MTRQ99707 1265 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 GBP3Q9H0R5 595 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 RASSF4Q9H2L5 321 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 RWDD2AQ9UIY3 292 aa14.32□□□□□ -0.12
CACNB3-204ENST00000547230 RRP15Q9Y3B9 282 aaKnown RBP14.32□□□□□ -0.12
CACNB3-204ENST00000547230 MINDY4BA8MYZ0 360 aa14.31□□□□□ -0.12
CACNB3-204ENST00000547230 PRPF3O43395 683 aaKnown RBP14.31□□□□□ -0.12
CACNB3-204ENST00000547230 BMP15O95972 392 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms