RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 KRTAP9-3Q9BYQ3 159 aa7.85□□□□□ -1.15
CCDC38-204ENST00000546816 CWC22Q9HCG8 908 aaKnown RBP7.85□□□□□ -1.15
CCDC38-204ENST00000546816 EBF1Q9UH73 591 aa7.85□□□□□ -1.15
CCDC38-204ENST00000546816 YBX2Q9Y2T7 364 aaKnown RBP7.85□□□□□ -1.15
CCDC38-204ENST00000546816 RBM47A0AV96 593 aaKnown RBP7.84□□□□□ -1.15
CCDC38-204ENST00000546816 CILPO75339 1184 aa7.84□□□□□ -1.15
CCDC38-204ENST00000546816 YARSP54577 528 aaKnown RBP7.84□□□□□ -1.15
CCDC38-204ENST00000546816 DLG4P78352 724 aa7.84□□□□□ -1.15
CCDC38-204ENST00000546816 SLFN12Q8IYM2 578 aa7.84□□□□□ -1.15
CCDC38-204ENST00000546816 INTS4Q96HW7 963 aaKnown RBP7.84□□□□□ -1.15
CCDC38-204ENST00000546816 IRF2BPLQ9H1B7 796 aa7.84□□□□□ -1.15
CCDC38-204ENST00000546816 FAM221AA4D161 298 aa7.83□□□□□ -1.16
CCDC38-204ENST00000546816 SEMA7AO75326 666 aa7.83□□□□□ -1.16
CCDC38-204ENST00000546816 HOXA5P20719 270 aa7.83□□□□□ -1.16
CCDC38-204ENST00000546816 BUD31P41223 144 aaPredicted RBP7.83□□□□□ -1.16
CCDC38-204ENST00000546816 ST13P50502 369 aaKnown RBP7.83□□□□□ -1.16
CCDC38-204ENST00000546816 TEKQ02763 1124 aa7.83□□□□□ -1.16
CCDC38-204ENST00000546816 BNC2Q6ZN30 1099 aaPredicted RBP7.83□□□□□ -1.16
CCDC38-204ENST00000546816 ZNF605Q86T29 641 aa7.83□□□□□ -1.16
CCDC38-204ENST00000546816 AEBP1Q8IUX7 1158 aa7.83□□□□□ -1.16
CCDC38-204ENST00000546816 BAHD1Q8TBE0 780 aaPredicted RBP7.83□□□□□ -1.16
CCDC38-204ENST00000546816 C20orf173Q96LM9 149 aa7.83□□□□□ -1.16
CCDC38-204ENST00000546816 ZNF552Q9H707 407 aaPredicted RBP7.83□□□□□ -1.16
CCDC38-204ENST00000546816 ZNF281Q9Y2X9 895 aa7.83□□□□□ -1.16
CCDC38-204ENST00000546816 PRR36Q9H6K5 1346 aa7.82□□□□□ -1.16
CCDC38-204ENST00000546816 SNX17Q15036 470 aa7.82□□□□□ -1.16
CCDC38-204ENST00000546816 TAF1CQ15572 869 aaPredicted RBP7.82□□□□□ -1.16
CCDC38-204ENST00000546816 SND1Q7KZF4 910 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCDC38-204ENST00000546816 SPPL2CQ8IUH8 684 aa7.82□□□□□ -1.16
CCDC38-204ENST00000546816 SHISA4Q96DD7 197 aa7.82□□□□□ -1.16
CCDC38-204ENST00000546816 GCM1Q9NP62 436 aa7.82□□□□□ -1.16
CCDC38-204ENST00000546816 SHISA3A0PJX4 238 aa7.81□□□□□ -1.16
CCDC38-204ENST00000546816 CTSWP56202 376 aa7.81□□□□□ -1.16
CCDC38-204ENST00000546816 CHRNEQ04844 493 aa7.81□□□□□ -1.16
CCDC38-204ENST00000546816 EAPPQ56P03 285 aaPredicted RBP7.81□□□□□ -1.16
CCDC38-204ENST00000546816 ANKS4BQ8N8V4 417 aa7.81□□□□□ -1.16
CCDC38-204ENST00000546816 LINC01599Q8WXQ3 324 aa7.81□□□□□ -1.16
CCDC38-204ENST00000546816 KREMEN1Q96MU8 473 aa7.81□□□□□ -1.16
CCDC38-204ENST00000546816 TEX51A0A1B0GUA7 166 aa7.8□□□□□ -1.16
CCDC38-204ENST00000546816 ANKRD33BA6NCL7 494 aa7.8□□□□□ -1.16
CCDC38-204ENST00000546816 NOTOA8MTQ0 251 aa7.8□□□□□ -1.16
CCDC38-204ENST00000546816 CTSHP09668 335 aa7.8□□□□□ -1.16
CCDC38-204ENST00000546816 PDIA4P13667 645 aaKnown RBP7.8□□□□□ -1.16
CCDC38-204ENST00000546816 GATAD2BQ8WXI9 593 aa7.8□□□□□ -1.16
CCDC38-204ENST00000546816 VWCEQ96DN2 955 aa7.8□□□□□ -1.16
CCDC38-204ENST00000546816 G6PC3Q9BUM1 346 aa7.8□□□□□ -1.16
CCDC38-204ENST00000546816 ASPNQ9BXN1 380 aa7.8□□□□□ -1.16
CCDC38-204ENST00000546816 USP31Q70CQ4 1352 aa7.8□□□□□ -1.16
CCDC38-204ENST00000546816 CHURC1-FNTBB4DL54 471 aa7.79□□□□□ -1.16
CCDC38-204ENST00000546816 PSPNO60542 156 aa7.79□□□□□ -1.16
CCDC38-204ENST00000546816 DAB2P98082 770 aa7.79□□□□□ -1.16
CCDC38-204ENST00000546816 LMNB2Q03252 620 aa7.79□□□□□ -1.16
CCDC38-204ENST00000546816 DUSP4Q13115 394 aa7.79□□□□□ -1.16
CCDC38-204ENST00000546816 CAMK2GQ13555 558 aaPredicted RBP7.79□□□□□ -1.16
CCDC38-204ENST00000546816 PARD6AQ9NPB6 346 aa7.79□□□□□ -1.16
CCDC38-204ENST00000546816 REV1Q9UBZ9 1251 aa7.79□□□□□ -1.16
CCDC38-204ENST00000546816 PARP2Q9UGN5 583 aa7.79□□□□□ -1.16
CCDC38-204ENST00000546816 GPR160Q9UJ42 338 aa7.79□□□□□ -1.16
CCDC38-204ENST00000546816 BPNT1O95861 308 aa7.78□□□□□ -1.16
CCDC38-204ENST00000546816 F13A1P00488 732 aa7.78□□□□□ -1.16
CCDC38-204ENST00000546816 PF4P02776 101 aa7.78□□□□□ -1.16
CCDC38-204ENST00000546816 DIEXFQ68CQ4 756 aaKnown RBP7.78□□□□□ -1.16
CCDC38-204ENST00000546816 SYTL4Q96C24 671 aaPredicted RBP7.78□□□□□ -1.16
CCDC38-204ENST00000546816 CCDC74BQ96LY2 380 aa7.78□□□□□ -1.16
CCDC38-204ENST00000546816 POLR3KQ9Y2Y1 108 aaPredicted RBP7.78□□□□□ -1.16
CCDC38-204ENST00000546816 EFEMP2O95967 443 aa7.77□□□□□ -1.17
CCDC38-204ENST00000546816 PDE6BP35913 854 aa7.77□□□□□ -1.17
CCDC38-204ENST00000546816 TNNI2P48788 182 aa7.77□□□□□ -1.17
CCDC38-204ENST00000546816 DNAJC14Q6Y2X3 702 aaPredicted RBP7.77□□□□□ -1.17
CCDC38-204ENST00000546816 RHOVQ96L33 236 aa7.77□□□□□ -1.17
CCDC38-204ENST00000546816 SGPP1Q9BX95 441 aa7.77□□□□□ -1.17
CCDC38-204ENST00000546816 CNOT6Q9ULM6 557 aaKnown RBP7.77□□□□□ -1.17
CCDC38-204ENST00000546816 F6X3S4 739 aa7.76□□□□□ -1.17
CCDC38-204ENST00000546816 DNAJA2O60884 412 aa7.76□□□□□ -1.17
CCDC38-204ENST00000546816 GALK1P51570 392 aa7.76□□□□□ -1.17
CCDC38-204ENST00000546816 NLRX1Q86UT6 975 aa7.76□□□□□ -1.17
CCDC38-204ENST00000546816 HTR3BO95264 441 aa7.75□□□□□ -1.17
CCDC38-204ENST00000546816 BMP7P18075 431 aa7.75□□□□□ -1.17
CCDC38-204ENST00000546816 PSMD2Q13200 908 aa7.75□□□□□ -1.17
CCDC38-204ENST00000546816 TMEM132EQ6IEE7 984 aa7.75□□□□□ -1.17
CCDC38-204ENST00000546816 ENOX1Q8TC92 643 aaKnown RBP7.75□□□□□ -1.17
CCDC38-204ENST00000546816 KCNC2Q96PR1 638 aa7.75□□□□□ -1.17
CCDC38-204ENST00000546816 KLHL3Q9UH77 587 aa7.75□□□□□ -1.17
CCDC38-204ENST00000546816 KCTD3Q9Y597 815 aa7.75□□□□□ -1.17
CCDC38-204ENST00000546816 CLEC16AQ2KHT3 1053 aa7.74□□□□□ -1.17
CCDC38-204ENST00000546816 ZNF385BQ569K4 471 aa7.74□□□□□ -1.17
CCDC38-204ENST00000546816 TMC4Q7Z404 712 aa7.74□□□□□ -1.17
CCDC38-204ENST00000546816 USHBP1Q8N6Y0 703 aa7.74□□□□□ -1.17
CCDC38-204ENST00000546816 SYTL5Q8TDW5 730 aaPredicted RBP7.74□□□□□ -1.17
CCDC38-204ENST00000546816 RELTQ969Z4 430 aa7.74□□□□□ -1.17
CCDC38-204ENST00000546816 KIF2CQ99661 725 aa7.74□□□□□ -1.17
CCDC38-204ENST00000546816 HDAC8Q9BY41 377 aa7.74□□□□□ -1.17
CCDC38-204ENST00000546816 A0A0G2JLL6 359 aaPredicted RBP7.73□□□□□ -1.17
CCDC38-204ENST00000546816 OR14I1A6ND48 311 aa7.73□□□□□ -1.17
CCDC38-204ENST00000546816 GRIN3BO60391 1043 aa7.73□□□□□ -1.17
CCDC38-204ENST00000546816 SSPNQ14714 243 aa7.73□□□□□ -1.17
CCDC38-204ENST00000546816 TCERG1LQ5VWI1 586 aa7.73□□□□□ -1.17
CCDC38-204ENST00000546816 RNF111Q6ZNA4 994 aa7.73□□□□□ -1.17
CCDC38-204ENST00000546816 MARCH10Q8NA82 808 aaPredicted RBP7.73□□□□□ -1.17
CCDC38-204ENST00000546816 TMEM74Q96NL1 305 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms