RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 DBNDD2Q9BQY9 259 aa15.6■□□□□ 0.09
SCAF11-208ENST00000546534 PIH1D3Q9NQM4 214 aaKnown RBP15.6■□□□□ 0.09
SCAF11-208ENST00000546534 SPTBN5Q9NRC6 3674 aaKnown RBP15.59■□□□□ 0.09
SCAF11-208ENST00000546534 CDK5RAP2Q96SN8 1893 aa15.59■□□□□ 0.09
SCAF11-208ENST00000546534 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
SCAF11-208ENST00000546534 CYP7A1P22680 504 aa15.59■□□□□ 0.09
SCAF11-208ENST00000546534 ADORA2AP29274 412 aa15.59■□□□□ 0.09
SCAF11-208ENST00000546534 ADCYAP1R1P41586 468 aa15.59■□□□□ 0.09
SCAF11-208ENST00000546534 ZAP70P43403 619 aa15.59■□□□□ 0.09
SCAF11-208ENST00000546534 SNX17Q15036 470 aa15.59■□□□□ 0.09
SCAF11-208ENST00000546534 CCDC158Q5M9N0 1113 aa15.59■□□□□ 0.09
SCAF11-208ENST00000546534 OLFML2BQ68BL8 750 aa15.59■□□□□ 0.09
SCAF11-208ENST00000546534 RPAP3Q9H6T3 665 aaPredicted RBP15.59■□□□□ 0.09
SCAF11-208ENST00000546534 SERPINB13Q9UIV8 391 aa15.59■□□□□ 0.09
SCAF11-208ENST00000546534 FOCADQ5VW36 1801 aa15.59■□□□□ 0.09
SCAF11-208ENST00000546534 RLFQ13129 1914 aa15.58■□□□□ 0.09
SCAF11-208ENST00000546534 SEPT4O43236 478 aa15.58■□□□□ 0.08
SCAF11-208ENST00000546534 ABCB5Q2M3G0 1257 aa15.58■□□□□ 0.08
SCAF11-208ENST00000546534 CERKLQ49MI3 558 aaPredicted RBP15.58■□□□□ 0.08
SCAF11-208ENST00000546534 TNNI3KQ59H18 835 aa15.58■□□□□ 0.08
SCAF11-208ENST00000546534 ARHGAP45Q92619 1136 aa15.58■□□□□ 0.08
SCAF11-208ENST00000546534 SYMPKQ92797 1274 aaKnown RBP15.58■□□□□ 0.08
SCAF11-208ENST00000546534 FERMT2Q96AC1 680 aa15.58■□□□□ 0.08
SCAF11-208ENST00000546534 RNF25Q96BH1 459 aaPredicted RBP15.58■□□□□ 0.08
SCAF11-208ENST00000546534 MOV10L1Q9BXT6 1211 aaKnown RBP15.58■□□□□ 0.08
SCAF11-208ENST00000546534 GPR108Q9NPR9 543 aa15.58■□□□□ 0.08
SCAF11-208ENST00000546534 FPGT-TNNI3KV9GXZ4 949 aa15.58■□□□□ 0.08
SCAF11-208ENST00000546534 LAMA2P24043 3122 aaKnown RBP15.58■□□□□ 0.08
SCAF11-208ENST00000546534 TTC28Q96AY4 2481 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 STRNO43815 780 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 COBLO75128 1261 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 GNAI2P04899 355 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 ITGB8P26012 769 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 USP5P45974 858 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 RARSP54136 660 aaKnown RBP15.57■□□□□ 0.08
SCAF11-208ENST00000546534 TLE2Q04725 743 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 LRRC41Q15345 812 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 PRAMEF19Q5SWL8 479 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 MIGA1Q8NAN2 632 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 EHD4Q9H223 541 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 CABP5Q9NP86 173 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 DNAH12Q6ZR08 3092 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 EYSQ5T1H1 3165 aa15.57■□□□□ 0.08
SCAF11-208ENST00000546534 IGSF3O75054 1194 aa15.56■□□□□ 0.08
SCAF11-208ENST00000546534 ERCC3P19447 782 aa15.56■□□□□ 0.08
SCAF11-208ENST00000546534 GUCY1A2P33402 732 aa15.56■□□□□ 0.08
SCAF11-208ENST00000546534 EPHB4P54760 987 aa15.56■□□□□ 0.08
SCAF11-208ENST00000546534 C1orf53Q5VUE5 145 aa15.56■□□□□ 0.08
SCAF11-208ENST00000546534 ZNF512BQ96KM6 892 aaPredicted RBP15.56■□□□□ 0.08
SCAF11-208ENST00000546534 RNPC3Q96LT9 517 aaKnown RBP15.56■□□□□ 0.08
SCAF11-208ENST00000546534 HOXC10Q9NYD6 342 aa15.56■□□□□ 0.08
SCAF11-208ENST00000546534 TMEM265A0A087WTH1 108 aa15.55■□□□□ 0.08
SCAF11-208ENST00000546534 RIOK3O14730 519 aaKnown RBP15.55■□□□□ 0.08
SCAF11-208ENST00000546534 IDH1O75874 414 aaKnown RBP15.55■□□□□ 0.08
SCAF11-208ENST00000546534 SHMT1P34896 483 aa15.55■□□□□ 0.08
SCAF11-208ENST00000546534 COG2Q14746 738 aa15.55■□□□□ 0.08
SCAF11-208ENST00000546534 FAM47AQ5JRC9 791 aa15.55■□□□□ 0.08
SCAF11-208ENST00000546534 TTC6Q86TZ1 520 aa15.55■□□□□ 0.08
SCAF11-208ENST00000546534 USP38Q8NB14 1042 aa15.55■□□□□ 0.08
SCAF11-208ENST00000546534 SHCBP1Q8NEM2 672 aa15.55■□□□□ 0.08
SCAF11-208ENST00000546534 SPATC1LQ9H0A9 340 aa15.55■□□□□ 0.08
SCAF11-208ENST00000546534 TACC3Q9Y6A5 838 aa15.55■□□□□ 0.08
SCAF11-208ENST00000546534 A0A1W2PRG0 241 aa15.54■□□□□ 0.08
SCAF11-208ENST00000546534 GABBR2O75899 941 aa15.54■□□□□ 0.08
SCAF11-208ENST00000546534 PLCD1P51178 756 aa15.54■□□□□ 0.08
SCAF11-208ENST00000546534 GRIN2CQ14957 1233 aa15.54■□□□□ 0.08
SCAF11-208ENST00000546534 SEPT2Q15019 361 aa15.54■□□□□ 0.08
SCAF11-208ENST00000546534 TNNQ9UQP3 1299 aa15.54■□□□□ 0.08
SCAF11-208ENST00000546534 ZNF236Q9UL36 1845 aa15.54■□□□□ 0.08
SCAF11-208ENST00000546534 MYO5AQ9Y4I1 1855 aaKnown RBP15.53■□□□□ 0.08
SCAF11-208ENST00000546534 CDH23Q9H251 3354 aa15.53■□□□□ 0.08
SCAF11-208ENST00000546534 OS9Q13438 667 aaPredicted RBP15.53■□□□□ 0.08
SCAF11-208ENST00000546534 TJAP1Q5JTD0 557 aa15.53■□□□□ 0.08
SCAF11-208ENST00000546534 CERS3Q8IU89 383 aa15.53■□□□□ 0.08
SCAF11-208ENST00000546534 MAGEB6Q8N7X4 407 aa15.53■□□□□ 0.08
SCAF11-208ENST00000546534 ZNF579Q8NAF0 562 aaKnown RBP15.53■□□□□ 0.08
SCAF11-208ENST00000546534 TANGO6Q9C0B7 1094 aa15.53■□□□□ 0.08
SCAF11-208ENST00000546534 SLC5A4Q9NY91 659 aa15.53■□□□□ 0.08
SCAF11-208ENST00000546534 TLR7Q9NYK1 1049 aaKnown RBP15.53■□□□□ 0.08
SCAF11-208ENST00000546534 DBNLQ9UJU6 430 aaKnown RBP15.53■□□□□ 0.08
SCAF11-208ENST00000546534 PHF24Q9UPV7 400 aa15.53■□□□□ 0.08
SCAF11-208ENST00000546534 MYH1P12882 1939 aa15.53■□□□□ 0.08
SCAF11-208ENST00000546534 KIAA0355O15063 1070 aa15.52■□□□□ 0.08
SCAF11-208ENST00000546534 CLTBP09497 229 aa15.52■□□□□ 0.08
SCAF11-208ENST00000546534 TRIM27P14373 513 aa15.52■□□□□ 0.08
SCAF11-208ENST00000546534 RAG1P15918 1043 aa15.52■□□□□ 0.08
SCAF11-208ENST00000546534 COL9A1P20849 921 aa15.52■□□□□ 0.08
SCAF11-208ENST00000546534 KIAA1755Q5JYT7 1200 aa15.52■□□□□ 0.08
SCAF11-208ENST00000546534 NCAPG2Q86XI2 1143 aa15.52■□□□□ 0.08
SCAF11-208ENST00000546534 KIF12Q96FN5 646 aa15.52■□□□□ 0.08
SCAF11-208ENST00000546534 MAML3Q96JK9 1138 aa15.52■□□□□ 0.08
SCAF11-208ENST00000546534 XPNPEP3Q9NQH7 507 aa15.52■□□□□ 0.08
SCAF11-208ENST00000546534 PRUNE2Q8WUY3 3088 aa15.51■□□□□ 0.07
SCAF11-208ENST00000546534 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.51■□□□□ 0.07
SCAF11-208ENST00000546534 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.51■□□□□ 0.07
SCAF11-208ENST00000546534 TNFRSF10AO00220 468 aa15.51■□□□□ 0.07
SCAF11-208ENST00000546534 DNAJB2P25686 324 aa15.51■□□□□ 0.07
SCAF11-208ENST00000546534 GABPAQ06546 454 aa15.51■□□□□ 0.07
SCAF11-208ENST00000546534 PLS1Q14651 629 aa15.51■□□□□ 0.07
SCAF11-208ENST00000546534 ABRAQ8N0Z2 381 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms