RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.09□□□□□ -0.95
KDM1B-203ENST00000546309 TAF6LQ9Y6J9 622 aa9.09□□□□□ -0.95
KDM1B-203ENST00000546309 SLC4A4Q9Y6R1 1079 aa9.09□□□□□ -0.95
KDM1B-203ENST00000546309 LAMA4Q16363 1823 aa9.09□□□□□ -0.95
KDM1B-203ENST00000546309 COL2A1P02458 1487 aaPredicted RBP9.08□□□□□ -0.96
KDM1B-203ENST00000546309 CXCL11O14625 94 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 TBC1D12O60347 775 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 NPM3O75607 178 aaKnown RBP9.08□□□□□ -0.96
KDM1B-203ENST00000546309 BAG3O95817 575 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 PLCG2P16885 1265 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 HOXD10P28358 340 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 MCM5P33992 734 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 PSMC4P43686 418 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 PRMT2P55345 433 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 RAB3GAP1Q15042 981 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 DCAF15Q66K64 600 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 RGS22Q8NE09 1264 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 RAET1EQ8TD07 263 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 ZNF274Q96GC6 653 aaPredicted RBP9.08□□□□□ -0.96
KDM1B-203ENST00000546309 CRNKL1Q9BZJ0 848 aaKnown RBP9.08□□□□□ -0.96
KDM1B-203ENST00000546309 OSBPL5Q9H0X9 879 aaPredicted RBP9.08□□□□□ -0.96
KDM1B-203ENST00000546309 NAPBQ9H115 298 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 SLKQ9H2G2 1235 aaPredicted RBP9.08□□□□□ -0.96
KDM1B-203ENST00000546309 RNF41Q9H4P4 317 aaPredicted RBP9.08□□□□□ -0.96
KDM1B-203ENST00000546309 TXNRD2Q9NNW7 524 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 TAOK2Q9UL54 1235 aa9.08□□□□□ -0.96
KDM1B-203ENST00000546309 H0YGN5 161 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 FMNL1O95466 1100 aaPredicted RBP9.07□□□□□ -0.96
KDM1B-203ENST00000546309 GNRH1P01148 92 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 APPP05067 770 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 CPA1P15085 419 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 ELNP15502 786 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 GUCY1A2P33402 732 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 TRDNQ13061 729 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 ME3Q16798 604 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 AKNAD1Q5T1N1 836 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 DZIP1Q86YF9 867 aaKnown RBP9.07□□□□□ -0.96
KDM1B-203ENST00000546309 NKX2-3Q8TAU0 364 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 TMEM87BQ96K49 555 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 LLPHQ9BRT6 129 aaKnown RBP9.07□□□□□ -0.96
KDM1B-203ENST00000546309 HTATIP2Q9BUP3 242 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 KRT23Q9C075 422 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 UNC93B1Q9H1C4 597 aa9.07□□□□□ -0.96
KDM1B-203ENST00000546309 TRIM75PA6NK02 468 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 PRKAB2O43741 272 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 CTNND1O60716 968 aaKnown RBP9.06□□□□□ -0.96
KDM1B-203ENST00000546309 PFKFB2O60825 505 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 CAP2P40123 477 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 LIFRP42702 1097 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 RCAN1P53805 252 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 SPP2Q13103 211 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 Q3C1V9 767 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 KIAA1755Q5JYT7 1200 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 CHRDL2Q6WN34 429 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 MFSD6Q6ZSS7 791 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 Q6ZUG5 572 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 RALYLQ86SE5 291 aaKnown RBP9.06□□□□□ -0.96
KDM1B-203ENST00000546309 TMTC2Q8N394 836 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 MIGA1Q8NAN2 632 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 DCP1AQ9NPI6 582 aaPredicted RBP9.06□□□□□ -0.96
KDM1B-203ENST00000546309 ARPP21Q9UBL0 812 aaPredicted RBP9.06□□□□□ -0.96
KDM1B-203ENST00000546309 TPCN1Q9ULQ1 816 aa9.06□□□□□ -0.96
KDM1B-203ENST00000546309 PARP14Q460N5 1801 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 ORC4O43929 436 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 CNMDO75829 334 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 IGHA2P01877 340 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 TDO2P48775 406 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 FLT3LGP49771 235 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 ANTXR2P58335 489 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 UBXN2AP68543 259 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 PPARAQ07869 468 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 COL9A3Q14050 684 aaPredicted RBP9.05□□□□□ -0.96
KDM1B-203ENST00000546309 SH3D19Q5HYK7 790 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 CTR9Q6PD62 1173 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 SGMS1Q86VZ5 419 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 SIAH1Q8IUQ4 282 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 TBC1D10CQ8IV04 446 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 MAPKAPK5Q8IW41 473 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 NOL10Q9BSC4 688 aaKnown RBP9.05□□□□□ -0.96
KDM1B-203ENST00000546309 EMILIN3Q9NT22 766 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 AATFQ9NY61 560 aaKnown RBP eCLIP9.05□□□□□ -0.96
KDM1B-203ENST00000546309 RBPJLQ9UBG7 517 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 NR2E3Q9Y5X4 410 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 BAZ2AQ9UIF9 1905 aaKnown RBP9.05□□□□□ -0.96
KDM1B-203ENST00000546309 FLT1P17948 1338 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 MYPNQ86TC9 1320 aa9.05□□□□□ -0.96
KDM1B-203ENST00000546309 ROBO3Q96MS0 1386 aa9.04□□□□□ -0.96
KDM1B-203ENST00000546309 PRC1O43663 620 aa9.04□□□□□ -0.96
KDM1B-203ENST00000546309 BRD1O95696 1058 aa9.04□□□□□ -0.96
KDM1B-203ENST00000546309 SLC3A2P08195 630 aaKnown RBP9.04□□□□□ -0.96
KDM1B-203ENST00000546309 CCL5P13501 91 aa9.04□□□□□ -0.96
KDM1B-203ENST00000546309 GRK4P32298 578 aa9.04□□□□□ -0.96
KDM1B-203ENST00000546309 HMGCS2P54868 508 aa9.04□□□□□ -0.96
KDM1B-203ENST00000546309 HAND2P61296 217 aa9.04□□□□□ -0.96
KDM1B-203ENST00000546309 ST3GAL1Q11201 340 aa9.04□□□□□ -0.96
KDM1B-203ENST00000546309 PPP2R5BQ15173 497 aa9.04□□□□□ -0.96
KDM1B-203ENST00000546309 ANKRD13CQ8N6S4 541 aa9.04□□□□□ -0.96
KDM1B-203ENST00000546309 SPRYD3Q8NCJ5 442 aa9.04□□□□□ -0.96
KDM1B-203ENST00000546309 SMARCC2Q8TAQ2 1214 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms