RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 CUL9Q8IWT3 2517 aa15.25■□□□□ 0.03
COPS7A-221ENST00000546229 GOLIM4O00461 696 aa15.24■□□□□ 0.03
COPS7A-221ENST00000546229 TTF1Q15361 905 aaPredicted RBP15.24■□□□□ 0.03
COPS7A-221ENST00000546229 TDHQ8IZJ6 230 aa15.24■□□□□ 0.03
COPS7A-221ENST00000546229 KIF1BPQ96EK5 621 aa15.24■□□□□ 0.03
COPS7A-221ENST00000546229 MOV10L1Q9BXT6 1211 aaKnown RBP15.24■□□□□ 0.03
COPS7A-221ENST00000546229 CRNKL1Q9BZJ0 848 aaKnown RBP15.24■□□□□ 0.03
COPS7A-221ENST00000546229 PRKAB2O43741 272 aa15.23■□□□□ 0.03
COPS7A-221ENST00000546229 CYP2C19P33261 490 aa15.23■□□□□ 0.03
COPS7A-221ENST00000546229 ADD2P35612 726 aa15.23■□□□□ 0.03
COPS7A-221ENST00000546229 CCNA1P78396 465 aa15.23■□□□□ 0.03
COPS7A-221ENST00000546229 HSP90AB4PQ58FF6 505 aa15.23■□□□□ 0.03
COPS7A-221ENST00000546229 DYNLL2Q96FJ2 89 aa15.23■□□□□ 0.03
COPS7A-221ENST00000546229 MCM9Q9NXL9 1143 aa15.23■□□□□ 0.03
COPS7A-221ENST00000546229 DDX20Q9UHI6 824 aaKnown RBP15.23■□□□□ 0.03
COPS7A-221ENST00000546229 PRUNE2Q8WUY3 3088 aa15.23■□□□□ 0.03
COPS7A-221ENST00000546229 AKR1B1P15121 316 aa15.22■□□□□ 0.03
COPS7A-221ENST00000546229 OLFML2BQ68BL8 750 aa15.22■□□□□ 0.03
COPS7A-221ENST00000546229 TMEM179Q6ZVK1 233 aa15.22■□□□□ 0.03
COPS7A-221ENST00000546229 RPAP2Q8IXW5 612 aaPredicted RBP15.22■□□□□ 0.03
COPS7A-221ENST00000546229 SHCBP1Q8NEM2 672 aa15.22■□□□□ 0.03
COPS7A-221ENST00000546229 SPATC1LQ9H0A9 340 aa15.22■□□□□ 0.03
COPS7A-221ENST00000546229 ARMT1Q9H993 441 aa15.22■□□□□ 0.03
COPS7A-221ENST00000546229 CABP5Q9NP86 173 aa15.22■□□□□ 0.03
COPS7A-221ENST00000546229 PLXNA1Q9UIW2 1896 aa15.21■□□□□ 0.03
COPS7A-221ENST00000546229 CYP2D7A0A087X1C5 515 aa15.21■□□□□ 0.03
COPS7A-221ENST00000546229 COBLO75128 1261 aa15.21■□□□□ 0.03
COPS7A-221ENST00000546229 MBD4O95243 580 aa15.21■□□□□ 0.03
COPS7A-221ENST00000546229 POLR3DP05423 398 aaPredicted RBP15.21■□□□□ 0.03
COPS7A-221ENST00000546229 ADORA2AP29274 412 aa15.21■□□□□ 0.03
COPS7A-221ENST00000546229 MFSD14CQ5VZR4 134 aa15.21■□□□□ 0.03
COPS7A-221ENST00000546229 Q7L0L9 218 aa15.21■□□□□ 0.03
COPS7A-221ENST00000546229 CLASRPQ8N2M8 674 aaKnown RBP15.21■□□□□ 0.03
COPS7A-221ENST00000546229 LPAR1Q92633 364 aa15.21■□□□□ 0.03
COPS7A-221ENST00000546229 DNAJC2Q99543 621 aaKnown RBP15.21■□□□□ 0.03
COPS7A-221ENST00000546229 TMX2Q9Y320 296 aa15.21■□□□□ 0.03
COPS7A-221ENST00000546229 ROBO3Q96MS0 1386 aa15.21■□□□□ 0.02
COPS7A-221ENST00000546229 ZNFX1Q9P2E3 1918 aaKnown RBP15.2■□□□□ 0.02
COPS7A-221ENST00000546229 DNM1LO00429 736 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 GLRX3O76003 335 aaKnown RBP15.2■□□□□ 0.02
COPS7A-221ENST00000546229 ATP5JP18859 108 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 ERCC3P19447 782 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 DSG3P32926 999 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 COG2Q14746 738 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 SNX17Q15036 470 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 C12orf60Q5U649 245 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 C16orf86Q6ZW13 317 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 ATG4CQ96DT6 458 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 HAUS7Q99871 368 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.2■□□□□ 0.02
COPS7A-221ENST00000546229 VCPKMTQ9H867 229 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 PAG1Q9NWQ8 432 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 MTMR10Q9NXD2 777 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 SWAP70Q9UH65 585 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 ADAMTS5Q9UNA0 930 aa15.2■□□□□ 0.02
COPS7A-221ENST00000546229 MSCO60682 206 aa15.19■□□□□ 0.02
COPS7A-221ENST00000546229 CCAR1Q8IX12 1150 aaKnown RBP15.19■□□□□ 0.02
COPS7A-221ENST00000546229 REPS2Q8NFH8 660 aa15.19■□□□□ 0.02
COPS7A-221ENST00000546229 ATP8A2Q9NTI2 1148 aa15.19■□□□□ 0.02
COPS7A-221ENST00000546229 COG6Q9Y2V7 657 aa15.19■□□□□ 0.02
COPS7A-221ENST00000546229 APBB1O00213 710 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 RAB11FIP3O75154 756 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 ICA1Q05084 483 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 TMEM132BQ14DG7 1078 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 WDR78Q5VTH9 848 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 ABRAQ8N0Z2 381 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 DEFB123Q8N688 67 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 MB21D1Q8N884 522 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 TANGO6Q9C0B7 1094 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 UBE2OQ9C0C9 1292 aaKnown RBP15.18■□□□□ 0.02
COPS7A-221ENST00000546229 BOLA2Q9H3K6 86 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 DDX19BQ9UMR2 479 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 IVNS1ABPQ9Y6Y0 642 aa15.18■□□□□ 0.02
COPS7A-221ENST00000546229 MPHOSPH10O00566 681 aaKnown RBP15.17■□□□□ 0.02
COPS7A-221ENST00000546229 WDR46O15213 610 aaKnown RBP15.17■□□□□ 0.02
COPS7A-221ENST00000546229 STRNO43815 780 aa15.17■□□□□ 0.02
COPS7A-221ENST00000546229 IFIT2P09913 472 aaKnown RBP15.17■□□□□ 0.02
COPS7A-221ENST00000546229 CDK8P49336 464 aa15.17■□□□□ 0.02
COPS7A-221ENST00000546229 MDM2Q00987 491 aaPredicted RBP15.17■□□□□ 0.02
COPS7A-221ENST00000546229 ATP2B2Q01814 1243 aa15.17■□□□□ 0.02
COPS7A-221ENST00000546229 UBE3CQ15386 1083 aa15.17■□□□□ 0.02
COPS7A-221ENST00000546229 SPICE1Q8N0Z3 855 aa15.17■□□□□ 0.02
COPS7A-221ENST00000546229 MAML3Q96JK9 1138 aa15.17■□□□□ 0.02
COPS7A-221ENST00000546229 SENP6Q9GZR1 1112 aaPredicted RBP15.17■□□□□ 0.02
COPS7A-221ENST00000546229 FBXO28Q9NVF7 368 aa15.17■□□□□ 0.02
COPS7A-221ENST00000546229 HOXC10Q9NYD6 342 aa15.17■□□□□ 0.02
COPS7A-221ENST00000546229 USP17L12C9JPN9 530 aa15.16■□□□□ 0.02
COPS7A-221ENST00000546229 USP17L21D6R901 530 aa15.16■□□□□ 0.02
COPS7A-221ENST00000546229 SEPT4O43236 478 aa15.16■□□□□ 0.02
COPS7A-221ENST00000546229 RTP1P59025 263 aa15.16■□□□□ 0.02
COPS7A-221ENST00000546229 C20orf194Q5TEA3 1177 aa15.16■□□□□ 0.02
COPS7A-221ENST00000546229 PUS7LQ9H0K6 701 aaKnown RBP15.16■□□□□ 0.02
COPS7A-221ENST00000546229 MROH8Q9H579 483 aa15.16■□□□□ 0.02
COPS7A-221ENST00000546229 CWC22Q9HCG8 908 aaKnown RBP15.16■□□□□ 0.02
COPS7A-221ENST00000546229 ZNF214Q9UL59 606 aaPredicted RBP15.16■□□□□ 0.02
COPS7A-221ENST00000546229 STXBP5LQ9Y2K9 1186 aa15.16■□□□□ 0.02
COPS7A-221ENST00000546229 SMCHD1A6NHR9 2005 aa15.16■□□□□ 0.02
COPS7A-221ENST00000546229 POTEB2H3BUK9 544 aa15.15■□□□□ 0.02
COPS7A-221ENST00000546229 HMMRO75330 724 aa15.15■□□□□ 0.02
COPS7A-221ENST00000546229 FLOT1O75955 427 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms