RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 PTH1RQ03431 593 aa20.61■□□□□ 0.89
CD9-211ENST00000546073 TREML2Q5T2D2 321 aa20.61■□□□□ 0.89
CD9-211ENST00000546073 NCOA7Q8NI08 942 aa20.61■□□□□ 0.89
CD9-211ENST00000546073 CEP95Q96GE4 821 aa20.61■□□□□ 0.89
CD9-211ENST00000546073 TTC14Q96N46 770 aa20.61■□□□□ 0.89
CD9-211ENST00000546073 EMILIN3Q9NT22 766 aa20.61■□□□□ 0.89
CD9-211ENST00000546073 WDR46O15213 610 aaKnown RBP20.6■□□□□ 0.89
CD9-211ENST00000546073 CYP2C8P10632 490 aa20.6■□□□□ 0.89
CD9-211ENST00000546073 VCAM1P19320 739 aa20.6■□□□□ 0.89
CD9-211ENST00000546073 MCCP23508 829 aa20.6■□□□□ 0.89
CD9-211ENST00000546073 HOXD10P28358 340 aa20.6■□□□□ 0.89
CD9-211ENST00000546073 ASCC2Q9H1I8 757 aaPredicted RBP20.6■□□□□ 0.89
CD9-211ENST00000546073 RPAP3Q9H6T3 665 aaPredicted RBP20.6■□□□□ 0.89
CD9-211ENST00000546073 TCP11L1Q9NUJ3 509 aa20.6■□□□□ 0.89
CD9-211ENST00000546073 MOGSQ13724 837 aa20.59■□□□□ 0.89
CD9-211ENST00000546073 ZNF296Q8WUU4 475 aaPredicted RBP20.59■□□□□ 0.89
CD9-211ENST00000546073 INCENPQ9NQS7 918 aa20.59■□□□□ 0.89
CD9-211ENST00000546073 CPA4Q9UI42 421 aa20.59■□□□□ 0.89
CD9-211ENST00000546073 SIPA1L1O43166 1804 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 A0A1W2PRG0 241 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 F5H6K3 240 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 KDM4AO75164 1064 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 KLRC3Q07444 240 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 IKQ13123 557 aaPredicted RBP20.58■□□□□ 0.89
CD9-211ENST00000546073 COG2Q14746 738 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 SAMD1Q6SPF0 538 aaPredicted RBP20.58■□□□□ 0.89
CD9-211ENST00000546073 CATSPERGQ6ZRH7 1159 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 CLEC10AQ8IUN9 316 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 TBC1D10CQ8IV04 446 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 SPICE1Q8N0Z3 855 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 MKL1Q969V6 931 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 IL25Q9H293 177 aa20.58■□□□□ 0.89
CD9-211ENST00000546073 PLIN4Q96Q06 1357 aa20.58■□□□□ 0.88
CD9-211ENST00000546073 B4E1Z4 1266 aa20.57■□□□□ 0.88
CD9-211ENST00000546073 FLOT1O75955 427 aa20.57■□□□□ 0.88
CD9-211ENST00000546073 TOP1P11387 765 aaKnown RBP20.57■□□□□ 0.88
CD9-211ENST00000546073 CCNA1P78396 465 aa20.57■□□□□ 0.88
CD9-211ENST00000546073 KRT32Q14532 448 aa20.57■□□□□ 0.88
CD9-211ENST00000546073 LSG1Q9H089 658 aaKnown RBP20.57■□□□□ 0.88
CD9-211ENST00000546073 KAT14Q9H8E8 782 aa20.57■□□□□ 0.88
CD9-211ENST00000546073 IGKV6D-41A0A0C4DH26 115 aa20.56■□□□□ 0.88
CD9-211ENST00000546073 FMNL1O95466 1100 aaPredicted RBP20.56■□□□□ 0.88
CD9-211ENST00000546073 GNRH1P01148 92 aa20.56■□□□□ 0.88
CD9-211ENST00000546073 CYP21A2P08686 494 aa20.56■□□□□ 0.88
CD9-211ENST00000546073 SLC1A4P43007 532 aa20.56■□□□□ 0.88
CD9-211ENST00000546073 HERVK_113P62684 666 aa20.56■□□□□ 0.88
CD9-211ENST00000546073 SLFN13Q68D06 897 aa20.56■□□□□ 0.88
CD9-211ENST00000546073 DGKHQ86XP1 1220 aa20.56■□□□□ 0.88
CD9-211ENST00000546073 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.56■□□□□ 0.88
CD9-211ENST00000546073 LAMB1P07942 1786 aa20.55■□□□□ 0.88
CD9-211ENST00000546073 E7EWF7 191 aa20.55■□□□□ 0.88
CD9-211ENST00000546073 FCGRTP55899 365 aa20.55■□□□□ 0.88
CD9-211ENST00000546073 DGKZQ13574 1117 aa20.55■□□□□ 0.88
CD9-211ENST00000546073 PKN2Q16513 984 aaKnown RBP20.55■□□□□ 0.88
CD9-211ENST00000546073 C17orf99Q6UX52 265 aa20.55■□□□□ 0.88
CD9-211ENST00000546073 CTU1Q7Z7A3 348 aaKnown RBP20.55■□□□□ 0.88
CD9-211ENST00000546073 LRRC47Q8N1G4 583 aaKnown RBP20.55■□□□□ 0.88
CD9-211ENST00000546073 ANKRD13CQ8N6S4 541 aa20.55■□□□□ 0.88
CD9-211ENST00000546073 GMCL1P1Q8NEA9 526 aa20.55■□□□□ 0.88
CD9-211ENST00000546073 GPRC5AQ8NFJ5 357 aa20.55■□□□□ 0.88
CD9-211ENST00000546073 ZSCAN10Q96SZ4 725 aaPredicted RBP20.55■□□□□ 0.88
CD9-211ENST00000546073 P2RX7Q99572 595 aaKnown RBP20.55■□□□□ 0.88
CD9-211ENST00000546073 EFCC1Q9HA90 598 aa20.55■□□□□ 0.88
CD9-211ENST00000546073 ATAD5Q96QE3 1844 aa20.55■□□□□ 0.88
CD9-211ENST00000546073 NEDD4P46934 1319 aa20.54■□□□□ 0.88
CD9-211ENST00000546073 EPB41L2O43491 1005 aaKnown RBP20.54■□□□□ 0.88
CD9-211ENST00000546073 FAM110CQ1W6H9 321 aa20.54■□□□□ 0.88
CD9-211ENST00000546073 CREB3L3Q68CJ9 461 aa20.54■□□□□ 0.88
CD9-211ENST00000546073 SIAH1Q8IUQ4 282 aa20.54■□□□□ 0.88
CD9-211ENST00000546073 MB21D1Q8N884 522 aa20.54■□□□□ 0.88
CD9-211ENST00000546073 CHURC1Q8WUH1 139 aa20.54■□□□□ 0.88
CD9-211ENST00000546073 PAGR1Q9BTK6 254 aa20.54■□□□□ 0.88
CD9-211ENST00000546073 ZSWIM5Q9P217 1185 aa20.54■□□□□ 0.88
CD9-211ENST00000546073 MTMR7Q9Y216 660 aa20.54■□□□□ 0.88
CD9-211ENST00000546073 RABGAP1Q9Y3P9 1069 aa20.54■□□□□ 0.88
CD9-211ENST00000546073 MYPNQ86TC9 1320 aa20.53■□□□□ 0.88
CD9-211ENST00000546073 IFIT3O14879 490 aaKnown RBP20.53■□□□□ 0.88
CD9-211ENST00000546073 SLC27A2O14975 620 aa20.53■□□□□ 0.88
CD9-211ENST00000546073 BMP3P12645 472 aa20.53■□□□□ 0.88
CD9-211ENST00000546073 CCDC96Q2M329 555 aa20.53■□□□□ 0.88
CD9-211ENST00000546073 FAM83BQ5T0W9 1011 aa20.53■□□□□ 0.88
CD9-211ENST00000546073 IFIT1BQ5T764 474 aaKnown RBP20.53■□□□□ 0.88
CD9-211ENST00000546073 COA7Q96BR5 231 aa20.53■□□□□ 0.88
CD9-211ENST00000546073 ZKSCAN3Q9BRR0 538 aa20.53■□□□□ 0.88
CD9-211ENST00000546073 R3HDMLQ9H3Y0 253 aa20.53■□□□□ 0.88
CD9-211ENST00000546073 FEM1BQ9UK73 627 aa20.53■□□□□ 0.88
CD9-211ENST00000546073 TRIM17Q9Y577 477 aa20.53■□□□□ 0.88
CD9-211ENST00000546073 NMT2O60551 498 aa20.52■□□□□ 0.88
CD9-211ENST00000546073 ZBED4O75132 1171 aa20.52■□□□□ 0.88
CD9-211ENST00000546073 NDUFB10O96000 172 aa20.52■□□□□ 0.88
CD9-211ENST00000546073 HMGB1P09429 215 aaKnown RBP20.52■□□□□ 0.88
CD9-211ENST00000546073 MCM5P33992 734 aa20.52■□□□□ 0.88
CD9-211ENST00000546073 LACTBP83111 547 aaPredicted RBP20.52■□□□□ 0.88
CD9-211ENST00000546073 FGD1P98174 961 aa20.52■□□□□ 0.88
CD9-211ENST00000546073 FAM160B2Q86V87 743 aa20.52■□□□□ 0.88
CD9-211ENST00000546073 CD99L2Q8TCZ2 262 aa20.52■□□□□ 0.88
CD9-211ENST00000546073 DCAF4Q8WV16 495 aa20.52■□□□□ 0.88
CD9-211ENST00000546073 NBPF3Q9H094 633 aa20.52■□□□□ 0.88
CD9-211ENST00000546073 IL17RBQ9NRM6 502 aa20.52■□□□□ 0.88
CD9-211ENST00000546073 MYH8P13535 1937 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms