RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 CNTNAP5Q8WYK1 1306 aa11.78□□□□□ -0.52
CIT-218ENST00000546026 SNHG28P0DPA3 235 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 YBX3P16989 372 aaKnown RBP eCLIP11.77□□□□□ -0.53
CIT-218ENST00000546026 NCLP19338 710 aaKnown RBP11.77□□□□□ -0.53
CIT-218ENST00000546026 GUCY1A2P33402 732 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 FOSBP53539 338 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 KIF23Q02241 960 aaPredicted RBP11.77□□□□□ -0.53
CIT-218ENST00000546026 RASA3Q14644 834 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 SAFBQ15424 915 aaKnown RBP eCLIP11.77□□□□□ -0.53
CIT-218ENST00000546026 PKN1Q16512 942 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 FOXD4L6Q3SYB3 417 aaPredicted RBP11.77□□□□□ -0.53
CIT-218ENST00000546026 TBC1D10BQ4KMP7 808 aaPredicted RBP11.77□□□□□ -0.53
CIT-218ENST00000546026 ASPRV1Q53RT3 343 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 OTUD7BQ6GQQ9 843 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 FOXD4L3Q6VB84 417 aaPredicted RBP11.77□□□□□ -0.53
CIT-218ENST00000546026 SAMD7Q7Z3H4 446 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 USP48Q86UV5 1035 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
CIT-218ENST00000546026 AIFM3Q96NN9 605 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 SPZ1Q9BXG8 430 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 RNF181Q9P0P0 153 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 CNPY2Q9Y2B0 182 aa11.77□□□□□ -0.53
CIT-218ENST00000546026 FAM196BA6NMK8 535 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 KLRF2D3W0D1 207 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 MMP1P03956 469 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 PDHBP11177 359 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 U2AF2P26368 475 aaKnown RBP eCLIP11.76□□□□□ -0.53
CIT-218ENST00000546026 PFKFB3Q16875 520 aaPredicted RBP11.76□□□□□ -0.53
CIT-218ENST00000546026 KLHL40Q2TBA0 621 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 APOBEC3FQ8IUX4 373 aaKnown RBP11.76□□□□□ -0.53
CIT-218ENST00000546026 STAG2Q8N3U4 1231 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 HOOK2Q96ED9 719 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 CHAMP1Q96JM3 812 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 TMEM39BQ9GZU3 492 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 SH3GLB2Q9NR46 395 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 GINM1Q9NU53 330 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 HACL1Q9UJ83 578 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 ELP1O95163 1332 aa11.76□□□□□ -0.53
CIT-218ENST00000546026 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 MBD3O95983 291 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 EGFRP00533 1210 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 SLURP2P0DP57 97 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 SCG2P13521 617 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 EEF2P13639 858 aaKnown RBP11.75□□□□□ -0.53
CIT-218ENST00000546026 SEPT2Q15019 361 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 GPATCH4Q5T3I0 446 aaKnown RBP11.75□□□□□ -0.53
CIT-218ENST00000546026 C9orf131Q5VYM1 1079 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 FAM173BQ6P4H8 233 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 DCAF4Q8WV16 495 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 TEPSINQ96N21 525 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 PHF20Q9BVI0 1012 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 FOXP1Q9H334 677 aaPredicted RBP11.75□□□□□ -0.53
CIT-218ENST00000546026 RIOX1Q9H6W3 641 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 GJB4Q9NTQ9 266 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 RCOR1Q9UKL0 485 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 DDX49Q9Y6V7 483 aaKnown RBP11.75□□□□□ -0.53
CIT-218ENST00000546026 MYH6P13533 1939 aa11.75□□□□□ -0.53
CIT-218ENST00000546026 TCHHQ07283 1943 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 UBE2Q2LH0YL09 131 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 FIBPO43427 364 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 GRIN3BO60391 1043 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 GDF11O95390 407 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 GH2P01242 217 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 LMOD1P29536 600 aaPredicted RBP11.74□□□□□ -0.53
CIT-218ENST00000546026 CAP2P40123 477 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 UBE2HP62256 183 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 ICA1Q05084 483 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 ZNF543Q08ER8 600 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 GNL2Q13823 731 aaKnown RBP11.74□□□□□ -0.53
CIT-218ENST00000546026 RRP1BQ14684 758 aaKnown RBP11.74□□□□□ -0.53
CIT-218ENST00000546026 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 SIAH1Q8IUQ4 282 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 LRRC47Q8N1G4 583 aaKnown RBP11.74□□□□□ -0.53
CIT-218ENST00000546026 GMCL1P1Q8NEA9 526 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 LEO1Q8WVC0 666 aaPredicted RBP11.74□□□□□ -0.53
CIT-218ENST00000546026 SPATA32Q96LK8 384 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 TFIP11Q9UBB9 837 aaKnown RBP11.74□□□□□ -0.53
CIT-218ENST00000546026 PPP2R3BQ9Y5P8 575 aa11.74□□□□□ -0.53
CIT-218ENST00000546026 ZC3H4Q9UPT8 1303 aaKnown RBP11.74□□□□□ -0.53
CIT-218ENST00000546026 KIF28PB7ZC32 967 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 hCG_1984214I3L0E3 225 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 CYTH3O43739 400 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 DDNO94850 711 aaPredicted RBP11.73□□□□□ -0.53
CIT-218ENST00000546026 GOLGA8HP0CJ92 632 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 CALML3P27482 149 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 EPS15P42566 896 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 JAG1P78504 1218 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 ATP2B2Q01814 1243 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 SLC35G1Q2M3R5 365 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 MYSM1Q5VVJ2 828 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 GALNT17Q6IS24 598 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 DPY19L2Q6NUT2 758 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 CLEC10AQ8IUN9 316 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 DIS3L2Q8IYB7 885 aaKnown RBP11.73□□□□□ -0.53
CIT-218ENST00000546026 ZNF713Q8N859 430 aaPredicted RBP11.73□□□□□ -0.53
CIT-218ENST00000546026 RRP36Q96EU6 259 aaKnown RBP11.73□□□□□ -0.53
CIT-218ENST00000546026 PITPNM2Q9BZ72 1349 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 DEFB129Q9H1M3 183 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 GDPD2Q9HCC8 539 aa11.73□□□□□ -0.53
CIT-218ENST00000546026 ARHGEF10LQ9HCE6 1279 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms