RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 SYMPKQ92797 1274 aaKnown RBP4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 COA7Q96BR5 231 aa4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 KCTD12Q96CX2 325 aaKnown RBP4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 XAGE2Q96GT9 111 aa4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 POM121Q96HA1 1249 aa4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 DEFB118Q96PH6 123 aa4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 MEIS3Q99687 375 aa4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 API5Q9BZZ5 524 aaKnown RBP4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 PRO3102Q9H379 93 aa4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 GDPD2Q9HCC8 539 aa4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 NOB1Q9ULX3 412 aaKnown RBP4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 AGTPBP1Q9UPW5 1226 aa4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 AKAP2Q9Y2D5 859 aa4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 TRIOBPQ9H2D6 2365 aa4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 CEP290O15078 2479 aa4.49□□□□□ -1.69
LPCAT3-212ENST00000545459 MKI67P46013 3256 aaKnown RBP4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 POTEMA6NI47 508 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 FAM196BA6NMK8 535 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 SRGAP3O43295 1099 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 MAP4K4O95819 1239 aaPredicted RBP4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 LDHCP07864 332 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 GNAI3P08754 354 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 CAP2P40123 477 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 ABL2P42684 1182 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 GCLCP48506 637 aaPredicted RBP4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 GSTO1P78417 241 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 SPP2Q13103 211 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 MTX1Q13505 466 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 FAM110CQ1W6H9 321 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 GORABQ5T7V8 394 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 BLOC1S3Q6QNY0 202 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 LYPD8Q6UX82 237 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 TBC1D9Q6ZT07 1266 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 ANKRD13CQ8N6S4 541 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 SPATA5Q8NB90 893 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 ZNF280CQ8ND82 737 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 NSUN4Q96CB9 384 aaKnown RBP4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 PAWRQ96IZ0 340 aaKnown RBP4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 NEUROD6Q96NK8 337 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 OSBPL5Q9H0X9 879 aaPredicted RBP4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 PAK6Q9NQU5 681 aaPredicted RBP4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 HMG20BQ9P0W2 317 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 CENPFP49454 3210 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 COL2A1P02458 1487 aaPredicted RBP4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 LOC285556D6RIA3 1793 aa4.48□□□□□ -1.69
LPCAT3-212ENST00000545459 BRCA2P51587 3418 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 ATAD5Q96QE3 1844 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 A0A1W2PPC1 479 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 USP17L5A8MUK1 530 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 SOX1O00570 391 aaPredicted RBP4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 HMGCRP04035 888 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 ARID4AP29374 1257 aaPredicted RBP4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 RARSP54136 660 aaKnown RBP4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 HMGCS2P54868 508 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 PABPC4Q13310 644 aaKnown RBP eCLIP4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 RRP1BQ14684 758 aaKnown RBP4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 PI16Q6UXB8 463 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 RNF19BQ6ZMZ0 732 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 NECAB2Q7Z6G3 386 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 TEX11Q8IYF3 940 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 ANKLE1Q8NAG6 615 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 DIS3LQ8TF46 1054 aaKnown RBP4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 LRRN4Q8WUT4 740 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 ARHGAP45Q92619 1136 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 THAP11Q96EK4 314 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 SPSB2Q99619 263 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 ASCC2Q9H1I8 757 aaPredicted RBP4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 AS3MTQ9HBK9 375 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 RAI14Q9P0K7 980 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 LRP2BPQ9P2M1 347 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 STAP2Q9UGK3 403 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 HERC5Q9UII4 1024 aaKnown RBP4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 GJD2Q9UKL4 321 aa4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.47□□□□□ -1.69
LPCAT3-212ENST00000545459 RPTORQ8N122 1335 aa4.46□□□□□ -1.69
LPCAT3-212ENST00000545459 ALPK3Q96L96 1907 aa4.46□□□□□ -1.69
LPCAT3-212ENST00000545459 DOCK3Q8IZD9 2030 aa4.46□□□□□ -1.69
LPCAT3-212ENST00000545459 PNMA6EA0A0J9YXQ4 647 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 BAG3O95817 575 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 GNAI2P04899 355 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 UQCRFS1P1P0C7P4 283 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 JUNDP17535 347 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 HOXA7P31268 230 aaPredicted RBP4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 MCAMP43121 646 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 PTPN5P54829 565 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 BACE1P56817 501 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 IRX3P78415 501 aaPredicted RBP4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 JAG1P78504 1218 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 TRIM32Q13049 653 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 G3BP1Q13283 466 aaKnown RBP eCLIP4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 MSS51Q4VC12 460 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 HOMEZQ8IX15 550 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 SH3RF3Q8TEJ3 882 aaPredicted RBP4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 TRIB2Q92519 343 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 GDF15Q99988 308 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 NOL10Q9BSC4 688 aaKnown RBP4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 WDR18Q9BV38 432 aa4.46□□□□□ -1.7
LPCAT3-212ENST00000545459 TRIM34Q9BYJ4 488 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms