RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 SH3RF1Q7Z6J0 888 aa8.8□□□□□ -1
LDHA-223ENST00000545215 ATOH1Q92858 354 aaPredicted RBP8.8□□□□□ -1
LDHA-223ENST00000545215 ALG13Q9NP73 1137 aaKnown RBP8.8□□□□□ -1
LDHA-223ENST00000545215 PDLIM7Q9NR12 457 aa8.8□□□□□ -1
LDHA-223ENST00000545215 PLXNA3P51805 1871 aa8.79□□□□□ -1
LDHA-223ENST00000545215 COL4A6Q14031 1691 aa8.79□□□□□ -1
LDHA-223ENST00000545215 BTBD11A6QL63 1104 aa8.79□□□□□ -1
LDHA-223ENST00000545215 COPS2P61201 443 aa8.79□□□□□ -1
LDHA-223ENST00000545215 CLDN10P78369 228 aa8.79□□□□□ -1
LDHA-223ENST00000545215 TSGA10IPQ3SY00 556 aa8.79□□□□□ -1
LDHA-223ENST00000545215 KIAA0825Q8IV33 1275 aa8.79□□□□□ -1
LDHA-223ENST00000545215 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.79□□□□□ -1
LDHA-223ENST00000545215 RMDN1Q96DB5 314 aa8.79□□□□□ -1
LDHA-223ENST00000545215 POLR3GLQ9BT43 218 aa8.79□□□□□ -1
LDHA-223ENST00000545215 ANKIB1Q9P2G1 1089 aa8.79□□□□□ -1
LDHA-223ENST00000545215 MTCH2Q9Y6C9 303 aa8.79□□□□□ -1
LDHA-223ENST00000545215 A0A0G2JMZ2 1700 aa8.78□□□□□ -1
LDHA-223ENST00000545215 CLRN2A0PK11 232 aa8.78□□□□□ -1
LDHA-223ENST00000545215 E9PSI1 815 aa8.78□□□□□ -1
LDHA-223ENST00000545215 MYO1BO43795 1136 aa8.78□□□□□ -1
LDHA-223ENST00000545215 DKK1O94907 266 aa8.78□□□□□ -1
LDHA-223ENST00000545215 ADH1BP00325 375 aa8.78□□□□□ -1
LDHA-223ENST00000545215 PPATQ06203 517 aa8.78□□□□□ -1
LDHA-223ENST00000545215 DPYDQ12882 1025 aa8.78□□□□□ -1
LDHA-223ENST00000545215 PKN1Q16512 942 aa8.78□□□□□ -1
LDHA-223ENST00000545215 SWI5Q1ZZU3 235 aa8.78□□□□□ -1
LDHA-223ENST00000545215 PTCRAQ6ISU1 281 aaPredicted RBP8.78□□□□□ -1
LDHA-223ENST00000545215 BMP8AQ7Z5Y6 402 aa8.78□□□□□ -1
LDHA-223ENST00000545215 ZBTB33Q86T24 672 aa8.78□□□□□ -1
LDHA-223ENST00000545215 TRIM50Q86XT4 487 aa8.78□□□□□ -1
LDHA-223ENST00000545215 TEPSINQ96N21 525 aa8.78□□□□□ -1
LDHA-223ENST00000545215 SLC28A3Q9HAS3 691 aa8.78□□□□□ -1
LDHA-223ENST00000545215 SH2B1Q9NRF2 756 aaPredicted RBP8.78□□□□□ -1
LDHA-223ENST00000545215 MSRAQ9UJ68 235 aa8.78□□□□□ -1
LDHA-223ENST00000545215 GJD2Q9UKL4 321 aa8.78□□□□□ -1
LDHA-223ENST00000545215 DOCK3Q8IZD9 2030 aa8.77□□□□□ -1.01
LDHA-223ENST00000545215 GAKO14976 1311 aa8.77□□□□□ -1.01
LDHA-223ENST00000545215 ECM29Q5VYK3 1845 aa8.77□□□□□ -1.01
LDHA-223ENST00000545215 ATP2B4P23634 1241 aa8.77□□□□□ -1.01
LDHA-223ENST00000545215 RPS8P62241 208 aaKnown RBP8.77□□□□□ -1.01
LDHA-223ENST00000545215 RAB30Q15771 203 aa8.77□□□□□ -1.01
LDHA-223ENST00000545215 GPAT2Q6NUI2 795 aa8.77□□□□□ -1.01
LDHA-223ENST00000545215 SLC39A5Q6ZMH5 540 aa8.77□□□□□ -1.01
LDHA-223ENST00000545215 TRIB2Q92519 343 aa8.77□□□□□ -1.01
LDHA-223ENST00000545215 VEZTQ9HBM0 779 aa8.77□□□□□ -1.01
LDHA-223ENST00000545215 DNAAF2Q9NVR5 837 aaKnown RBP8.77□□□□□ -1.01
LDHA-223ENST00000545215 PCDHAC2Q9Y5I4 1007 aa8.77□□□□□ -1.01
LDHA-223ENST00000545215 MAST4O15021 2626 aa8.76□□□□□ -1.01
LDHA-223ENST00000545215 MYO15AQ9UKN7 3530 aa8.76□□□□□ -1.01
LDHA-223ENST00000545215 IL13P35225 146 aa8.76□□□□□ -1.01
LDHA-223ENST00000545215 FPGSQ05932 587 aa8.76□□□□□ -1.01
LDHA-223ENST00000545215 SF3B3Q15393 1217 aaKnown RBP8.76□□□□□ -1.01
LDHA-223ENST00000545215 RASIP1Q5U651 963 aa8.76□□□□□ -1.01
LDHA-223ENST00000545215 FAM163AQ96GL9 167 aaPredicted RBP8.76□□□□□ -1.01
LDHA-223ENST00000545215 ZNF594Q96JF6 807 aaPredicted RBP8.76□□□□□ -1.01
LDHA-223ENST00000545215 PRMT6Q96LA8 375 aaPredicted RBP8.76□□□□□ -1.01
LDHA-223ENST00000545215 CCDC85AQ96PX6 553 aaPredicted RBP8.76□□□□□ -1.01
LDHA-223ENST00000545215 NKX2-4Q9H2Z4 354 aa8.76□□□□□ -1.01
LDHA-223ENST00000545215 NOD1Q9Y239 953 aa8.76□□□□□ -1.01
LDHA-223ENST00000545215 RIF1Q5UIP0 2472 aaKnown RBP8.75□□□□□ -1.01
LDHA-223ENST00000545215 USP24Q9UPU5 2620 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 RPAP1Q9BWH6 1393 aaPredicted RBP8.75□□□□□ -1.01
LDHA-223ENST00000545215 FAM186AA6NE01 2351 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 TRIOO75962 3097 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 DMXL1Q9Y485 3027 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 SOWAHDA6NJG2 315 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 ATP1A2P50993 1020 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 CACNB2Q08289 660 aaPredicted RBP8.75□□□□□ -1.01
LDHA-223ENST00000545215 SNX17Q15036 470 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 TTLL5Q6EMB2 1281 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 CDAN1Q8IWY9 1227 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 SIX5Q8N196 739 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 ASH1LQ9NR48 2969 aaKnown RBP8.75□□□□□ -1.01
LDHA-223ENST00000545215 DOLKQ9UPQ8 538 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 DNAH14Q0VDD8 3507 aa8.75□□□□□ -1.01
LDHA-223ENST00000545215 FLNBO75369 2602 aaKnown RBP8.74□□□□□ -1.01
LDHA-223ENST00000545215 AOX1Q06278 1338 aa8.74□□□□□ -1.01
LDHA-223ENST00000545215 FAM208BQ5VWN6 2430 aa8.74□□□□□ -1.01
LDHA-223ENST00000545215 DNM1LO00429 736 aa8.74□□□□□ -1.01
LDHA-223ENST00000545215 CCND3P30281 292 aaPredicted RBP8.74□□□□□ -1.01
LDHA-223ENST00000545215 TNFAIP1Q13829 316 aa8.74□□□□□ -1.01
LDHA-223ENST00000545215 PUM1Q14671 1186 aaKnown RBP eCLIP8.74□□□□□ -1.013e-25■□□□□ 9.9
LDHA-223ENST00000545215 TRIM60Q495X7 471 aa8.74□□□□□ -1.01
LDHA-223ENST00000545215 DNAJC14Q6Y2X3 702 aaPredicted RBP8.74□□□□□ -1.01
LDHA-223ENST00000545215 THSD4Q6ZMP0 1018 aa8.74□□□□□ -1.01
LDHA-223ENST00000545215 C1orf216Q8TAB5 229 aa8.74□□□□□ -1.01
LDHA-223ENST00000545215 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.74□□□□□ -1.012e-8■■■■■ 35.5
LDHA-223ENST00000545215 KIAA1024Q9UPX6 916 aa8.74□□□□□ -1.01
LDHA-223ENST00000545215 TACC3Q9Y6A5 838 aa8.74□□□□□ -1.01
LDHA-223ENST00000545215 MAP1BP46821 2468 aaKnown RBP8.73□□□□□ -1.01
LDHA-223ENST00000545215 SH3TC1Q8TE82 1336 aa8.73□□□□□ -1.01
LDHA-223ENST00000545215 PRRC2BQ5JSZ5 2229 aaKnown RBP8.73□□□□□ -1.01
LDHA-223ENST00000545215 GNAT3A8MTJ3 354 aa8.73□□□□□ -1.01
LDHA-223ENST00000545215 NBL1P41271 181 aa8.73□□□□□ -1.01
LDHA-223ENST00000545215 LCE2DQ5TA82 110 aaPredicted RBP8.73□□□□□ -1.01
LDHA-223ENST00000545215 C1orf53Q5VUE5 145 aa8.73□□□□□ -1.01
LDHA-223ENST00000545215 ADSSL1Q8N142 457 aa8.73□□□□□ -1.01
LDHA-223ENST00000545215 TRMT112Q9UI30 125 aaKnown RBP8.73□□□□□ -1.01
LDHA-223ENST00000545215 YBX2Q9Y2T7 364 aaKnown RBP8.73□□□□□ -1.01
LDHA-223ENST00000545215 RLFQ13129 1914 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms