RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SLFN5Q08AF3 891 aa11.52□□□□□ -0.57
CHD4-212ENST00000545083 ABCB5Q2M3G0 1257 aa11.52□□□□□ -0.57
CHD4-212ENST00000545083 ADAMTS19Q8TE59 1207 aa11.52□□□□□ -0.57
CHD4-212ENST00000545083 TIFAQ96CG3 184 aa11.52□□□□□ -0.57
CHD4-212ENST00000545083 ASB2Q96Q27 587 aa11.52□□□□□ -0.57
CHD4-212ENST00000545083 SPATC1LQ9H0A9 340 aa11.52□□□□□ -0.57
CHD4-212ENST00000545083 PIH1D3Q9NQM4 214 aaKnown RBP11.52□□□□□ -0.57
CHD4-212ENST00000545083 HDAC5Q9UQL6 1122 aa11.52□□□□□ -0.57
CHD4-212ENST00000545083 MYO9BQ13459 2157 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 PNMA6EA0A0J9YXQ4 647 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 A0A1W2PRG0 241 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 GRXCR1A8MXD5 290 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 STRNO43815 780 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 PQBP1O60828 265 aaKnown RBP11.51□□□□□ -0.57
CHD4-212ENST00000545083 PGK1P00558 417 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 ZAP70P43403 619 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 FAAP100Q0VG06 881 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 ADGRE1Q14246 886 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 CERKLQ49MI3 558 aaPredicted RBP11.51□□□□□ -0.57
CHD4-212ENST00000545083 KIAA1755Q5JYT7 1200 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 ATF7IPQ6VMQ6 1270 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 SHCBP1Q8NEM2 672 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 ATXN2LQ8WWM7 1075 aaKnown RBP11.51□□□□□ -0.57
CHD4-212ENST00000545083 LENG1Q96BZ8 264 aaPredicted RBP11.51□□□□□ -0.57
CHD4-212ENST00000545083 CDCA7LQ96GN5 454 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 MAML3Q96JK9 1138 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 DBNDD2Q9BQY9 259 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHD4-212ENST00000545083 EHD4Q9H223 541 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 PRDM12Q9H4Q4 367 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 THEGQ9P2T0 379 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 SERPINB13Q9UIV8 391 aa11.51□□□□□ -0.57
CHD4-212ENST00000545083 A0A1W2PQ45 241 aaPredicted RBP11.5□□□□□ -0.57
CHD4-212ENST00000545083 A0A1W2PQY0 241 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 TAL1P17542 331 aaPredicted RBP11.5□□□□□ -0.57
CHD4-212ENST00000545083 CYP7A1P22680 504 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 SHMT1P34896 483 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 EVX2Q03828 476 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 COG2Q14746 738 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 SEPT2Q15019 361 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 TTC39AQ5SRH9 613 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 C16orf59Q7L2K0 433 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 MIGA1Q8NAN2 632 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 FAM122AQ96E09 287 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 UHRF1Q96T88 793 aaPredicted RBP11.5□□□□□ -0.57
CHD4-212ENST00000545083 PBX4Q9BYU1 374 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 API5Q9BZZ5 524 aaKnown RBP11.5□□□□□ -0.57
CHD4-212ENST00000545083 XPNPEP3Q9NQH7 507 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 TMEM39AQ9NV64 488 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 MYO5AQ9Y4I1 1855 aaKnown RBP11.5□□□□□ -0.57
CHD4-212ENST00000545083 SMCHD1A6NHR9 2005 aa11.5□□□□□ -0.57
CHD4-212ENST00000545083 CHD7Q9P2D1 2997 aa11.49□□□□□ -0.57
CHD4-212ENST00000545083 A0A0G2JMZ2 1700 aa11.49□□□□□ -0.57
CHD4-212ENST00000545083 RARBP10826 455 aa11.49□□□□□ -0.57
CHD4-212ENST00000545083 PLCD1P51178 756 aa11.49□□□□□ -0.57
CHD4-212ENST00000545083 MAP3K12Q12852 859 aa11.49□□□□□ -0.57
CHD4-212ENST00000545083 G3BP1Q13283 466 aaKnown RBP eCLIP11.49□□□□□ -0.577e-7■■■□□ 14.6
CHD4-212ENST00000545083 TNNI3KQ59H18 835 aa11.49□□□□□ -0.57
CHD4-212ENST00000545083 AKNAD1Q5T1N1 836 aa11.49□□□□□ -0.57
CHD4-212ENST00000545083 NCAPG2Q86XI2 1143 aa11.49□□□□□ -0.57
CHD4-212ENST00000545083 NECAB3Q96P71 396 aaPredicted RBP11.49□□□□□ -0.57
CHD4-212ENST00000545083 GAS2L1Q99501 681 aaPredicted RBP11.49□□□□□ -0.57
CHD4-212ENST00000545083 TANGO6Q9C0B7 1094 aa11.49□□□□□ -0.57
CHD4-212ENST00000545083 HOXC10Q9NYD6 342 aa11.49□□□□□ -0.57
CHD4-212ENST00000545083 FPGT-TNNI3KV9GXZ4 949 aa11.49□□□□□ -0.57
CHD4-212ENST00000545083 ANP32CO43423 234 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 ADAMTS4O75173 837 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 GNAI3P08754 354 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 HOXD11P31277 338 aaPredicted RBP11.48□□□□□ -0.57
CHD4-212ENST00000545083 DSG3P32926 999 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 USP5P45974 858 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 MRPS5P82675 430 aaKnown RBP11.48□□□□□ -0.57
CHD4-212ENST00000545083 PLS1Q14651 629 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 CCDC85BQ15834 202 aaPredicted RBP11.48□□□□□ -0.57
CHD4-212ENST00000545083 RASIP1Q5U651 963 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 ANKRD33Q7Z3H0 272 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 RNF180Q86T96 592 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 ABRAQ8N0Z2 381 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
CHD4-212ENST00000545083 SLC44A5Q8NCS7 719 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 ATG4CQ96DT6 458 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 CABP5Q9NP86 173 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 TBX21Q9UL17 535 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 MYH1P12882 1939 aa11.48□□□□□ -0.57
CHD4-212ENST00000545083 TIMP1P01033 207 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 PGK2P07205 417 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 ZNF865P0CJ78 1059 aaPredicted RBP11.47□□□□□ -0.57
CHD4-212ENST00000545083 GABPAQ06546 454 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 CCDC158Q5M9N0 1113 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 TMEM240Q5SV17 173 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 CCDC129Q6ZRS4 1044 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 TTC6Q86TZ1 520 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 CLEC10AQ8IUN9 316 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 ZNF512BQ96KM6 892 aaPredicted RBP11.47□□□□□ -0.57
CHD4-212ENST00000545083 TOX2Q96NM4 488 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 TINF2Q9BSI4 451 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 MROH8Q9H579 483 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 SLC5A4Q9NY91 659 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 XIRP2A4UGR9 3374 aa11.47□□□□□ -0.57
CHD4-212ENST00000545083 ROBO3Q96MS0 1386 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms