RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 CCDC40Q4G0X9 1142 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 TAF3Q5VWG9 929 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 TCERG1LQ5VWI1 586 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 CNGA4Q8IV77 575 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 TEX11Q8IYF3 940 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 RMND1Q9NWS8 449 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 GDAQ9Y2T3 454 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 PIK3C2AO00443 1686 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 SPAG1Q07617 926 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 IL17RAQ96F46 866 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 TIGD1Q96MW7 591 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 ZCCHC17Q9NP64 241 aaKnown RBP9.79□□□□□ -0.84
CCDC7-210ENST00000545067 SEPT11Q9NVA2 429 aaKnown RBP9.79□□□□□ -0.84
CCDC7-210ENST00000545067 UBR1Q8IWV7 1749 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 PP2D1A8MPX8 630 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 LDHCP07864 332 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 PLCD1P51178 756 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 DNAJC21Q5F1R6 531 aaKnown RBP9.79□□□□□ -0.84
CCDC7-210ENST00000545067 RBM43Q6ZSC3 357 aaKnown RBP9.79□□□□□ -0.84
CCDC7-210ENST00000545067 LRP10Q7Z4F1 713 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 NEK11Q8NG66 645 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 ZNF287Q9HBT7 754 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 BIN2Q9UBW5 565 aaPredicted RBP9.79□□□□□ -0.84
CCDC7-210ENST00000545067 UFL1O94874 794 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 SPATA1Q5VX52 437 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 LRRN4CLQ8ND94 238 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
CCDC7-210ENST00000545067 WDR24Q96S15 920 aa9.79□□□□□ -0.84
CCDC7-210ENST00000545067 OSBPL5Q9H0X9 879 aaPredicted RBP9.79□□□□□ -0.84
CCDC7-210ENST00000545067 CCNL1Q9UK58 526 aaPredicted RBP9.79□□□□□ -0.84
CCDC7-210ENST00000545067 TECP42680 631 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 MECOMQ03112 1051 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 MORC3Q14149 939 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 DHX37Q8IY37 1157 aaKnown RBP9.78□□□□□ -0.84
CCDC7-210ENST00000545067 ANKRD13CQ8N6S4 541 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 NKX2-3Q8TAU0 364 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 FERMT2Q96AC1 680 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 PAGE5Q96GU1 130 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 CCDC42Q96M95 316 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 FAM207AQ9NSI2 230 aaPredicted RBP9.78□□□□□ -0.84
CCDC7-210ENST00000545067 SRPRBQ9Y5M8 271 aaKnown RBP9.78□□□□□ -0.84
CCDC7-210ENST00000545067 RFX7Q2KHR2 1363 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 KCNJ18B7U540 433 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 ZMYND10O75800 440 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 ZNF76P36508 570 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 KCNJ12Q14500 433 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 PTPROQ16827 1216 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 TMEM266Q2M3C6 531 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 NBPF11Q86T75 865 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 FOXP4Q8IVH2 680 aaPredicted RBP9.78□□□□□ -0.84
CCDC7-210ENST00000545067 BLIDQ8IZY5 108 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 RNF26Q9BY78 433 aaPredicted RBP9.78□□□□□ -0.84
CCDC7-210ENST00000545067 FRMPD2Q68DX3 1309 aaPredicted RBP9.78□□□□□ -0.84
CCDC7-210ENST00000545067 TRIM49BA6NDI0 452 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 CUL4BQ13620 913 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 SLC35F6Q8N357 371 aa9.78□□□□□ -0.84
CCDC7-210ENST00000545067 NOC4LQ9BVI4 516 aaKnown RBP9.78□□□□□ -0.84
CCDC7-210ENST00000545067 SLFN14P0C7P3 912 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 OAS2P29728 719 aaKnown RBP9.77□□□□□ -0.85
CCDC7-210ENST00000545067 MRPS25P82663 173 aaKnown RBP9.77□□□□□ -0.85
CCDC7-210ENST00000545067 CPDO75976 1380 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 STX10O60499 249 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 DMTNQ08495 405 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 SGMS1Q86VZ5 419 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 AGXT2Q9BYV1 514 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 C6orf50Q9HD87 102 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 ARHGAP23Q9P227 1491 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 ERVV-1B6SEH8 477 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 KLRF2D3W0D1 207 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 PARP1P09874 1014 aaKnown RBP9.77□□□□□ -0.85
CCDC7-210ENST00000545067 KLRK1P26718 216 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 GNAQP50148 359 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 LRRC47Q8N1G4 583 aaKnown RBP9.77□□□□□ -0.85
CCDC7-210ENST00000545067 ENOX1Q8TC92 643 aaKnown RBP9.77□□□□□ -0.85
CCDC7-210ENST00000545067 STAG1Q8WVM7 1258 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 RRP36Q96EU6 259 aaKnown RBP9.77□□□□□ -0.85
CCDC7-210ENST00000545067 SLC39A2Q9NP94 309 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 MINPP1Q9UNW1 487 aa9.77□□□□□ -0.85
CCDC7-210ENST00000545067 CAPN2P17655 700 aa9.76□□□□□ -0.85
CCDC7-210ENST00000545067 USP17L2Q6R6M4 530 aa9.76□□□□□ -0.85
CCDC7-210ENST00000545067 CCDC43Q96MW1 224 aaKnown RBP9.76□□□□□ -0.85
CCDC7-210ENST00000545067 NAPGQ99747 312 aaPredicted RBP9.76□□□□□ -0.85
CCDC7-210ENST00000545067 FBXO2Q9UK22 296 aaPredicted RBP9.76□□□□□ -0.85
CCDC7-210ENST00000545067 SMCO2A6NFE2 343 aa9.76□□□□□ -0.85
CCDC7-210ENST00000545067 USO1O60763 962 aaKnown RBP9.76□□□□□ -0.85
CCDC7-210ENST00000545067 RPN1P04843 607 aaKnown RBP9.76□□□□□ -0.85
CCDC7-210ENST00000545067 CYLC1P35663 651 aaPredicted RBP9.76□□□□□ -0.85
CCDC7-210ENST00000545067 NOP2P46087 812 aaKnown RBP9.76□□□□□ -0.85
CCDC7-210ENST00000545067 AMPD3Q01432 767 aa9.76□□□□□ -0.85
CCDC7-210ENST00000545067 KIF5AQ12840 1032 aa9.76□□□□□ -0.85
CCDC7-210ENST00000545067 SMC1AQ14683 1233 aaKnown RBP9.76□□□□□ -0.85
CCDC7-210ENST00000545067 PTPAQ15257 358 aa9.76□□□□□ -0.85
CCDC7-210ENST00000545067 NELFCDQ8IXH7 590 aa9.76□□□□□ -0.85
CCDC7-210ENST00000545067 CNBD1Q8NA66 436 aa9.76□□□□□ -0.85
CCDC7-210ENST00000545067 ZNF622Q969S3 477 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCDC7-210ENST00000545067 NLRC4Q9NPP4 1024 aa9.76□□□□□ -0.85
CCDC7-210ENST00000545067 DDX41Q9UJV9 622 aaKnown RBP9.76□□□□□ -0.85
CCDC7-210ENST00000545067 TOB1P50616 345 aaPredicted RBP9.76□□□□□ -0.85
CCDC7-210ENST00000545067 UBE4AQ14139 1066 aa9.76□□□□□ -0.85
CCDC7-210ENST00000545067 ADGRA1Q86SQ6 560 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms