RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 NR1I2O75469 434 aa14.7□□□□□ -0.06
PAAF1-214ENST00000544552 RBM5P52756 815 aaKnown RBP eCLIP14.7□□□□□ -0.06
PAAF1-214ENST00000544552 MAP3K11Q16584 847 aa14.7□□□□□ -0.06
PAAF1-214ENST00000544552 TPRNQ4KMQ1 711 aa14.7□□□□□ -0.06
PAAF1-214ENST00000544552 FOXP4Q8IVH2 680 aaPredicted RBP14.7□□□□□ -0.06
PAAF1-214ENST00000544552 ENGASEQ8NFI3 743 aa14.7□□□□□ -0.06
PAAF1-214ENST00000544552 MTMR4Q9NYA4 1195 aa14.7□□□□□ -0.06
PAAF1-214ENST00000544552 PI4KBQ9UBF8 816 aa14.7□□□□□ -0.06
PAAF1-214ENST00000544552 FAM198AQ9UFP1 575 aa14.7□□□□□ -0.06
PAAF1-214ENST00000544552 BRCA1P38398 1863 aaKnown RBP14.69□□□□□ -0.06
PAAF1-214ENST00000544552 CTAGE5O15320 804 aa14.69□□□□□ -0.06
PAAF1-214ENST00000544552 SHMT1P34896 483 aa14.69□□□□□ -0.06
PAAF1-214ENST00000544552 FAM160A1Q05DH4 1040 aa14.69□□□□□ -0.06
PAAF1-214ENST00000544552 CCDC73Q6ZRK6 1079 aa14.69□□□□□ -0.06
PAAF1-214ENST00000544552 METTL16Q86W50 562 aaKnown RBP14.69□□□□□ -0.06
PAAF1-214ENST00000544552 MRPS27Q92552 414 aaKnown RBP14.69□□□□□ -0.06
PAAF1-214ENST00000544552 SHISA4Q96DD7 197 aa14.69□□□□□ -0.06
PAAF1-214ENST00000544552 SPZ1Q9BXG8 430 aa14.69□□□□□ -0.06
PAAF1-214ENST00000544552 TNMDQ9H2S6 317 aa14.69□□□□□ -0.06
PAAF1-214ENST00000544552 BRMS1Q9HCU9 246 aa14.69□□□□□ -0.06
PAAF1-214ENST00000544552 VPS54Q9P1Q0 977 aa14.69□□□□□ -0.06
PAAF1-214ENST00000544552 ZNRF3Q9ULT6 936 aa14.69□□□□□ -0.06
PAAF1-214ENST00000544552 ADAMTSL1Q8N6G6 1762 aa14.69□□□□□ -0.06
PAAF1-214ENST00000544552 COL2A1P02458 1487 aaPredicted RBP14.68□□□□□ -0.06
PAAF1-214ENST00000544552 CMA1P23946 247 aa14.68□□□□□ -0.06
PAAF1-214ENST00000544552 KRT2P35908 639 aa14.68□□□□□ -0.06
PAAF1-214ENST00000544552 SNW1Q13573 536 aaKnown RBP14.68□□□□□ -0.06
PAAF1-214ENST00000544552 CFAP100Q494V2 611 aa14.68□□□□□ -0.06
PAAF1-214ENST00000544552 AXDND1Q5T1B0 1012 aaPredicted RBP14.68□□□□□ -0.06
PAAF1-214ENST00000544552 STAG2Q8N3U4 1231 aa14.68□□□□□ -0.06
PAAF1-214ENST00000544552 PANK2Q9BZ23 570 aa14.68□□□□□ -0.06
PAAF1-214ENST00000544552 ZNF277Q9NRM2 450 aaPredicted RBP14.68□□□□□ -0.06
PAAF1-214ENST00000544552 ATRNL1Q5VV63 1379 aa14.67□□□□□ -0.06
PAAF1-214ENST00000544552 PARP1P09874 1014 aaKnown RBP14.67□□□□□ -0.06
PAAF1-214ENST00000544552 CCDC192P0DO97 292 aa14.67□□□□□ -0.06
PAAF1-214ENST00000544552 AKR1B1P15121 316 aa14.67□□□□□ -0.06
PAAF1-214ENST00000544552 TOB1P50616 345 aaPredicted RBP14.67□□□□□ -0.06
PAAF1-214ENST00000544552 NPY5RQ15761 445 aa14.67□□□□□ -0.06
PAAF1-214ENST00000544552 UVSSAQ2YD98 709 aa14.67□□□□□ -0.06
PAAF1-214ENST00000544552 ZFPM1Q8IX07 1006 aa14.67□□□□□ -0.06
PAAF1-214ENST00000544552 AGBL3Q8NEM8 1001 aa14.67□□□□□ -0.06
PAAF1-214ENST00000544552 TNFRSF25Q93038 417 aa14.67□□□□□ -0.06
PAAF1-214ENST00000544552 PRMT6Q96LA8 375 aaPredicted RBP14.67□□□□□ -0.06
PAAF1-214ENST00000544552 HDAC9Q9UKV0 1011 aa14.67□□□□□ -0.06
PAAF1-214ENST00000544552 PCDHAC2Q9Y5I4 1007 aa14.67□□□□□ -0.06
PAAF1-214ENST00000544552 MYH8P13535 1937 aa14.67□□□□□ -0.06
PAAF1-214ENST00000544552 FAM237AA0A1B0GTK4 181 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 KLRF2D3W0D1 207 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 PSMD14O00487 310 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 TTLL1O95922 423 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 SNHG28P0DPA3 235 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 CALML3P27482 149 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 MMP14P50281 582 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 NR5A1Q13285 461 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 GALNT17Q6IS24 598 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 NIM1KQ8IY84 436 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 FMR1NBQ8N0W7 255 aaPredicted RBP14.66□□□□□ -0.06
PAAF1-214ENST00000544552 FSIP1Q8NA03 581 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 OXER1Q8TDS5 423 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 ANP32BQ92688 251 aaKnown RBP14.66□□□□□ -0.06
PAAF1-214ENST00000544552 GOLPH3LQ9H4A5 285 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 CEP131Q9UPN4 1083 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 BAZ2BQ9UIF8 2168 aaKnown RBP14.66□□□□□ -0.06
PAAF1-214ENST00000544552 hCG_1642624A0A1W2PR95 340 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 DDTLA6NHG4 134 aaPredicted RBP14.66□□□□□ -0.06
PAAF1-214ENST00000544552 CYTH3O43739 400 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 CUTAO60888 179 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 TATDN1Q6P1N9 297 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 SH3BP5LQ7L8J4 393 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 OGFOD1Q8N543 542 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 MTMR14Q8NCE2 650 aa14.66□□□□□ -0.06
PAAF1-214ENST00000544552 TDRD3Q9H7E2 651 aaKnown RBP14.66□□□□□ -0.06
PAAF1-214ENST00000544552 GREB1LQ9C091 1923 aaPredicted RBP14.66□□□□□ -0.06
PAAF1-214ENST00000544552 SPDYE2BA6NHP3 402 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 KINO60870 393 aaKnown RBP14.65□□□□□ -0.06
PAAF1-214ENST00000544552 RAD17O75943 681 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 BMP15O95972 392 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 SPDYE6P0CI01 402 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 TRAPPC10P48553 1259 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 NLRP5P59047 1200 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 CAMK4Q16566 473 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 SLC35G1Q2M3R5 365 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 ASPRV1Q53RT3 343 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 FKBP1CQ5VVH2 108 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 DNAJC18Q9H819 358 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 CABP5Q9NP86 173 aa14.65□□□□□ -0.06
PAAF1-214ENST00000544552 COL4A5P29400 1685 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 ARFGEF1Q9Y6D6 1849 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 PDHBP11177 359 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 CACNB3P54284 484 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 TCP10Q12799 353 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 GPR162Q16538 588 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 DAGLBQ8NCG7 672 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 CCDC148Q8NFR7 591 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 MKL1Q969V6 931 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 PPP1R9BQ96SB3 815 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 TAOK3Q9H2K8 898 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 RIOX1Q9H6W3 641 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 TMOD2Q9NZR1 351 aa14.64□□□□□ -0.07
PAAF1-214ENST00000544552 NOL7Q9UMY1 257 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms