RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 NYAP2Q9P242 653 aa35.34■■■■□ 3.25
CCM2-219ENST00000544363 GUCY1A2P33402 732 aa35.33■■■■□ 3.25
CCM2-219ENST00000544363 SEPT2Q15019 361 aa35.33■■■■□ 3.25
CCM2-219ENST00000544363 MIGA2Q7L4E1 593 aa35.33■■■■□ 3.25
CCM2-219ENST00000544363 FBXO18Q8NFZ0 1043 aa35.33■■■■□ 3.25
CCM2-219ENST00000544363 MTMR7Q9Y216 660 aa35.33■■■■□ 3.25
CCM2-219ENST00000544363 PRPF3O43395 683 aaKnown RBP35.32■■■■□ 3.25
CCM2-219ENST00000544363 LRRC47Q8N1G4 583 aaKnown RBP35.32■■■■□ 3.25
CCM2-219ENST00000544363 AIFM3Q96NN9 605 aa35.32■■■■□ 3.25
CCM2-219ENST00000544363 PALM3A6NDB9 673 aaPredicted RBP35.32■■■■□ 3.24
CCM2-219ENST00000544363 GH2P01242 217 aa35.32■■■■□ 3.24
CCM2-219ENST00000544363 JAG1P78504 1218 aa35.32■■■■□ 3.24
CCM2-219ENST00000544363 AKAP17AQ02040 695 aaKnown RBP35.32■■■■□ 3.24
CCM2-219ENST00000544363 FERMT3Q86UX7 667 aa35.32■■■■□ 3.24
CCM2-219ENST00000544363 STAG2Q8N3U4 1231 aa35.32■■■■□ 3.24
CCM2-219ENST00000544363 MKL1Q969V6 931 aa35.32■■■■□ 3.24
CCM2-219ENST00000544363 CNTNAP5Q8WYK1 1306 aa35.31■■■■□ 3.24
CCM2-219ENST00000544363 UBE2Q2LH0YL09 131 aa35.31■■■■□ 3.24
CCM2-219ENST00000544363 ATP2B2Q01814 1243 aa35.31■■■■□ 3.24
CCM2-219ENST00000544363 GUCY1B3Q02153 619 aa35.31■■■■□ 3.24
CCM2-219ENST00000544363 GGA3Q9NZ52 723 aa35.31■■■■□ 3.24
CCM2-219ENST00000544363 PARP1P09874 1014 aaKnown RBP35.3■■■■□ 3.24
CCM2-219ENST00000544363 EEF2P13639 858 aaKnown RBP35.3■■■■□ 3.24
CCM2-219ENST00000544363 ICA1Q05084 483 aa35.3■■■■□ 3.24
CCM2-219ENST00000544363 L3MBTL3Q96JM7 780 aaPredicted RBP35.3■■■■□ 3.24
CCM2-219ENST00000544363 DDX11L8A8MPP1 907 aa35.29■■■■□ 3.24
CCM2-219ENST00000544363 CHAMP1Q96JM3 812 aa35.29■■■■□ 3.24
CCM2-219ENST00000544363 LZTS2Q9BRK4 669 aa35.29■■■■□ 3.24
CCM2-219ENST00000544363 ZSCAN16Q9H4T2 348 aaPredicted RBP35.29■■■■□ 3.24
CCM2-219ENST00000544363 V9GY48 417 aaPredicted RBP35.29■■■■□ 3.24
CCM2-219ENST00000544363 MYH4Q9Y623 1939 aa35.29■■■■□ 3.24
CCM2-219ENST00000544363 RESTQ13127 1097 aa35.28■■■■□ 3.24
CCM2-219ENST00000544363 FOXD4L6Q3SYB3 417 aaPredicted RBP35.28■■■■□ 3.24
CCM2-219ENST00000544363 MCTP1Q6DN14 999 aa35.28■■■■□ 3.24
CCM2-219ENST00000544363 OTUD7BQ6GQQ9 843 aa35.28■■■■□ 3.24
CCM2-219ENST00000544363 FOXD4L3Q6VB84 417 aaPredicted RBP35.28■■■■□ 3.24
CCM2-219ENST00000544363 GOLGA6L22H0YM25 854 aa35.28■■■■□ 3.24
CCM2-219ENST00000544363 SNHG28P0DPA3 235 aa35.28■■■■□ 3.24
CCM2-219ENST00000544363 PDHBP11177 359 aa35.28■■■■□ 3.24
CCM2-219ENST00000544363 SIAH1Q8IUQ4 282 aa35.28■■■■□ 3.24
CCM2-219ENST00000544363 GJB4Q9NTQ9 266 aa35.28■■■■□ 3.24
CCM2-219ENST00000544363 USP17L5A8MUK1 530 aa35.27■■■■□ 3.24
CCM2-219ENST00000544363 USP17L2Q6R6M4 530 aa35.27■■■■□ 3.24
CCM2-219ENST00000544363 RASGRP2Q7LDG7 609 aa35.27■■■■□ 3.24
CCM2-219ENST00000544363 PPP2R3BQ9Y5P8 575 aa35.27■■■■□ 3.24
CCM2-219ENST00000544363 PITPNM2Q9BZ72 1349 aa35.27■■■■□ 3.24
CCM2-219ENST00000544363 CAP2P40123 477 aa35.26■■■■□ 3.24
CCM2-219ENST00000544363 PKN1Q16512 942 aa35.26■■■■□ 3.24
CCM2-219ENST00000544363 ZBTB21Q9ULJ3 1066 aa35.26■■■■□ 3.24
CCM2-219ENST00000544363 MYH6P13533 1939 aa35.26■■■■□ 3.24
CCM2-219ENST00000544363 GLTPD2A6NH11 291 aa35.25■■■■□ 3.23
CCM2-219ENST00000544363 KLRF2D3W0D1 207 aa35.25■■■■□ 3.23
CCM2-219ENST00000544363 GOLGA8HP0CJ92 632 aa35.25■■■■□ 3.23
CCM2-219ENST00000544363 TRIM29Q14134 588 aa35.25■■■■□ 3.23
CCM2-219ENST00000544363 NBPF12Q5TAG4 269 aaPredicted RBP35.25■■■■□ 3.23
CCM2-219ENST00000544363 KRT40Q6A162 431 aa35.25■■■■□ 3.23
CCM2-219ENST00000544363 RBM27Q9P2N5 1060 aaKnown RBP35.25■■■■□ 3.23
CCM2-219ENST00000544363 ASPRV1Q53RT3 343 aa35.24■■■■□ 3.23
CCM2-219ENST00000544363 PHF20L1A8MW92 1017 aa35.24■■■■□ 3.23
CCM2-219ENST00000544363 HOOK2Q96ED9 719 aa35.24■■■■□ 3.23
CCM2-219ENST00000544363 SMARCA1P28370 1054 aa35.23■■■■□ 3.23
CCM2-219ENST00000544363 hCG_1642624A0A1W2PR95 340 aa35.22■■■■□ 3.23
CCM2-219ENST00000544363 SPZ1Q9BXG8 430 aa35.22■■■■□ 3.23
CCM2-219ENST00000544363 SLC35G1Q2M3R5 365 aa35.21■■■■□ 3.23
CCM2-219ENST00000544363 DCAF15Q66K64 600 aa35.21■■■■□ 3.23
CCM2-219ENST00000544363 SYNPO2Q9UMS6 1093 aa35.21■■■■□ 3.23
CCM2-219ENST00000544363 CYTH3O43739 400 aa35.21■■■■□ 3.23
CCM2-219ENST00000544363 PTMSP20962 102 aa35.21■■■■□ 3.23
CCM2-219ENST00000544363 DNM1Q05193 864 aaKnown RBP35.21■■■■□ 3.23
CCM2-219ENST00000544363 ZNF543Q08ER8 600 aa35.21■■■■□ 3.23
CCM2-219ENST00000544363 XBP1P17861 261 aa35.2■■■■□ 3.23
CCM2-219ENST00000544363 USP50Q70EL3 339 aaPredicted RBP35.2■■■■□ 3.23
CCM2-219ENST00000544363 FRMPD2Q68DX3 1309 aaPredicted RBP35.19■■■■□ 3.22
CCM2-219ENST00000544363 ASNSP08243 561 aa35.19■■■■□ 3.22
CCM2-219ENST00000544363 PFKFB3Q16875 520 aaPredicted RBP35.19■■■■□ 3.22
CCM2-219ENST00000544363 GPATCH4Q5T3I0 446 aaKnown RBP35.19■■■■□ 3.22
CCM2-219ENST00000544363 FAM173BQ6P4H8 233 aa35.19■■■■□ 3.22
CCM2-219ENST00000544363 GMCL1P1Q8NEA9 526 aa35.19■■■■□ 3.22
CCM2-219ENST00000544363 ARHGEF10LQ9HCE6 1279 aa35.19■■■■□ 3.22
CCM2-219ENST00000544363 SCG2P13521 617 aa35.18■■■■□ 3.22
CCM2-219ENST00000544363 KIF23Q02241 960 aaPredicted RBP35.18■■■■□ 3.22
CCM2-219ENST00000544363 PRAMEF18Q5VWM3 479 aa35.18■■■■□ 3.22
CCM2-219ENST00000544363 SLFN13Q68D06 897 aa35.18■■■■□ 3.22
CCM2-219ENST00000544363 DCAF4Q8WV16 495 aa35.18■■■■□ 3.22
CCM2-219ENST00000544363 DCPSQ96C86 337 aaKnown RBP35.18■■■■□ 3.22
CCM2-219ENST00000544363 ZNF341Q9BYN7 854 aa35.18■■■■□ 3.22
CCM2-219ENST00000544363 GINM1Q9NU53 330 aa35.18■■■■□ 3.22
CCM2-219ENST00000544363 CNPY2Q9Y2B0 182 aa35.18■■■■□ 3.22
CCM2-219ENST00000544363 BAZ2BQ9UIF8 2168 aaKnown RBP35.18■■■■□ 3.22
CCM2-219ENST00000544363 TCHHQ07283 1943 aa35.18■■■■□ 3.22
CCM2-219ENST00000544363 EPHX2P34913 555 aa35.17■■■■□ 3.22
CCM2-219ENST00000544363 PIBF1Q8WXW3 757 aa35.17■■■■□ 3.22
CCM2-219ENST00000544363 POLR2AP24928 1970 aaKnown RBP35.17■■■■□ 3.22
CCM2-219ENST00000544363 A0A1W2PRG0 241 aa35.17■■■■□ 3.22
CCM2-219ENST00000544363 MMP1P03956 469 aa35.17■■■■□ 3.22
CCM2-219ENST00000544363 CPVLQ9H3G5 476 aa35.17■■■■□ 3.22
CCM2-219ENST00000544363 F5H6K3 240 aa35.16■■■■□ 3.22
CCM2-219ENST00000544363 CTNND1O60716 968 aaKnown RBP35.16■■■■□ 3.22
CCM2-219ENST00000544363 KLRC3Q07444 240 aa35.16■■■■□ 3.22
CCM2-219ENST00000544363 CCDC96Q2M329 555 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms