RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 RNF26Q9BY78 433 aaPredicted RBP11.99□□□□□ -0.49
LDHC-208ENST00000544105 TDRD3Q9H7E2 651 aaKnown RBP11.99□□□□□ -0.49
LDHC-208ENST00000544105 FAM217BQ9NTX9 383 aaPredicted RBP11.99□□□□□ -0.49
LDHC-208ENST00000544105 STX8Q9UNK0 236 aa11.99□□□□□ -0.49
LDHC-208ENST00000544105 FIBPO43427 364 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 NMT2O60551 498 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 TOP1P11387 765 aaKnown RBP11.98□□□□□ -0.49
LDHC-208ENST00000544105 RPS12P25398 132 aaKnown RBP11.98□□□□□ -0.49
LDHC-208ENST00000544105 GUCY1B3Q02153 619 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 CXCL9Q07325 125 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 TROAPQ12815 778 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 RESTQ13127 1097 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 NTRK3Q16288 839 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 TMEM87AQ8NBN3 555 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 SLC44A5Q8NCS7 719 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 PNMA1Q8ND90 353 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 PHKBQ93100 1093 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 PRMT6Q96LA8 375 aaPredicted RBP11.98□□□□□ -0.49
LDHC-208ENST00000544105 DDX4Q9NQI0 724 aaKnown RBP11.98□□□□□ -0.49
LDHC-208ENST00000544105 CNPY2Q9Y2B0 182 aa11.98□□□□□ -0.49
LDHC-208ENST00000544105 MPHOSPH10O00566 681 aaKnown RBP11.97□□□□□ -0.49
LDHC-208ENST00000544105 PRPF3O43395 683 aaKnown RBP11.97□□□□□ -0.49
LDHC-208ENST00000544105 PPFIA3O75145 1194 aa11.97□□□□□ -0.49
LDHC-208ENST00000544105 TNNI2P48788 182 aa11.97□□□□□ -0.49
LDHC-208ENST00000544105 UBE2HP62256 183 aa11.97□□□□□ -0.49
LDHC-208ENST00000544105 GABPAQ06546 454 aa11.97□□□□□ -0.49
LDHC-208ENST00000544105 VARS2Q5ST30 1063 aaKnown RBP11.97□□□□□ -0.49
LDHC-208ENST00000544105 CCDC82Q8N4S0 544 aa11.97□□□□□ -0.49
LDHC-208ENST00000544105 MTMR14Q8NCE2 650 aa11.97□□□□□ -0.49
LDHC-208ENST00000544105 SPATA32Q96LK8 384 aa11.97□□□□□ -0.49
LDHC-208ENST00000544105 GMLQ99445 158 aa11.97□□□□□ -0.49
LDHC-208ENST00000544105 IL17RBQ9NRM6 502 aa11.97□□□□□ -0.49
LDHC-208ENST00000544105 MYH1P12882 1939 aa11.96□□□□□ -0.49
LDHC-208ENST00000544105 NFIAQ12857 509 aa11.96□□□□□ -0.49
LDHC-208ENST00000544105 CERKLQ49MI3 558 aaPredicted RBP11.96□□□□□ -0.49
LDHC-208ENST00000544105 FKBP1CQ5VVH2 108 aa11.96□□□□□ -0.49
LDHC-208ENST00000544105 KRT40Q6A162 431 aa11.96□□□□□ -0.49
LDHC-208ENST00000544105 RCSD1Q6JBY9 416 aa11.96□□□□□ -0.49
LDHC-208ENST00000544105 TMTC3Q6ZXV5 915 aa11.96□□□□□ -0.49
LDHC-208ENST00000544105 RNF25Q96BH1 459 aaPredicted RBP11.96□□□□□ -0.49
LDHC-208ENST00000544105 TMEM47Q9BQJ4 181 aa11.96□□□□□ -0.49
LDHC-208ENST00000544105 GZF1Q9H116 711 aaPredicted RBP11.96□□□□□ -0.49
LDHC-208ENST00000544105 BRMS1Q9HCU9 246 aa11.96□□□□□ -0.49
LDHC-208ENST00000544105 TFIP11Q9UBB9 837 aaKnown RBP11.96□□□□□ -0.49
LDHC-208ENST00000544105 ZNF70Q9UC06 446 aaPredicted RBP11.96□□□□□ -0.49
LDHC-208ENST00000544105 FAM198AQ9UFP1 575 aa11.96□□□□□ -0.49
LDHC-208ENST00000544105 V9GY48 417 aaPredicted RBP11.96□□□□□ -0.49
LDHC-208ENST00000544105 ELP1O95163 1332 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 NFKBIEO00221 500 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 TTLL1O95922 423 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 PARP1P09874 1014 aaKnown RBP11.95□□□□□ -0.5
LDHC-208ENST00000544105 CACNB3P54284 484 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 GRM4Q14833 912 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 ARHGAP27Q6ZUM4 889 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 NBPF11Q86T75 865 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 FAM151AQ8WW52 585 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 CEP95Q96GE4 821 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 GDPD2Q9HCC8 539 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 CABP5Q9NP86 173 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 MTMR4Q9NYA4 1195 aa11.95□□□□□ -0.5
LDHC-208ENST00000544105 HERC5Q9UII4 1024 aaKnown RBP11.95□□□□□ -0.5
LDHC-208ENST00000544105 TCP10L2B9ZVM9 353 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 LETM1O95202 739 aaPredicted RBP11.94□□□□□ -0.5
LDHC-208ENST00000544105 AKR1B1P15121 316 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 SMARCA1P28370 1054 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 TNFAIP1Q13829 316 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 SF3A1Q15459 793 aaKnown RBP11.94□□□□□ -0.5
LDHC-208ENST00000544105 RBM26Q5T8P6 1007 aaKnown RBP11.94□□□□□ -0.5
LDHC-208ENST00000544105 OTUD7BQ6GQQ9 843 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 CAVIN1Q6NZI2 390 aaKnown RBP11.94□□□□□ -0.5
LDHC-208ENST00000544105 CMTR1Q8N1G2 835 aaKnown RBP11.94□□□□□ -0.5
LDHC-208ENST00000544105 DPF2Q92785 391 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 CHAMP1Q96JM3 812 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 KANSL2Q9H9L4 492 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.94□□□□□ -0.5
LDHC-208ENST00000544105 VEZTQ9HBM0 779 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 MYOZ2Q9NPC6 264 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 CLIP2Q9UDT6 1046 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 PCDHAC2Q9Y5I4 1007 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 GJA3Q9Y6H8 435 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 COL2A1P02458 1487 aaPredicted RBP11.94□□□□□ -0.5
LDHC-208ENST00000544105 SCN9AQ15858 1988 aa11.94□□□□□ -0.5
LDHC-208ENST00000544105 PLIN4Q96Q06 1357 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 FOCADQ5VW36 1801 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 CLRN2A0PK11 232 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 DDTLA6NHG4 134 aaPredicted RBP11.93□□□□□ -0.5
LDHC-208ENST00000544105 H7C1D1 291 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 SHMT1P34896 483 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 KIF23Q02241 960 aaPredicted RBP11.93□□□□□ -0.5
LDHC-208ENST00000544105 ASPRV1Q53RT3 343 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 FAM173BQ6P4H8 233 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 FAM83AQ86UY5 434 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 ZFPM1Q8IX07 1006 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 SRBD1Q8N5C6 995 aaKnown RBP11.93□□□□□ -0.5
LDHC-208ENST00000544105 NLGN2Q8NFZ4 835 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 LEO1Q8WVC0 666 aaPredicted RBP11.93□□□□□ -0.5
LDHC-208ENST00000544105 CSRNP1Q96S65 589 aa11.93□□□□□ -0.5
LDHC-208ENST00000544105 FOXP1Q9H334 677 aaPredicted RBP11.93□□□□□ -0.5
LDHC-208ENST00000544105 ISY1Q9ULR0 285 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms