RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 IL27Q8NEV9 243 aa13.87□□□□□ -0.19
AP000439.1-201ENST00000544004 ACER1Q8TDN7 264 aa13.87□□□□□ -0.19
AP000439.1-201ENST00000544004 HDAC5Q9UQL6 1122 aa13.87□□□□□ -0.19
AP000439.1-201ENST00000544004 ZNFX1Q9P2E3 1918 aaKnown RBP13.87□□□□□ -0.19
AP000439.1-201ENST00000544004 ERCC3P19447 782 aa13.86□□□□□ -0.19
AP000439.1-201ENST00000544004 TATDN1Q6P1N9 297 aa13.86□□□□□ -0.19
AP000439.1-201ENST00000544004 CCDC129Q6ZRS4 1044 aa13.86□□□□□ -0.19
AP000439.1-201ENST00000544004 SLC44A5Q8NCS7 719 aa13.86□□□□□ -0.19
AP000439.1-201ENST00000544004 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.86□□□□□ -0.19
AP000439.1-201ENST00000544004 PBX4Q9BYU1 374 aa13.86□□□□□ -0.19
AP000439.1-201ENST00000544004 XPNPEP3Q9NQH7 507 aa13.86□□□□□ -0.19
AP000439.1-201ENST00000544004 SLC5A4Q9NY91 659 aa13.86□□□□□ -0.19
AP000439.1-201ENST00000544004 MYO9BQ13459 2157 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 A0A1W2PQ45 241 aaPredicted RBP13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 A0A1W2PQY0 241 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 GRXCR1A8MXD5 290 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 SRGAP3O43295 1099 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 PGK1P00558 417 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 UQCRFS1P1P0C7P4 283 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 RARBP10826 455 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 FAAP100Q0VG06 881 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 RNF180Q86T96 592 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 SHCBP1Q8NEM2 672 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 MAML3Q96JK9 1138 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 C1QTNF1Q9BXJ1 281 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 SPATC1LQ9H0A9 340 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 SNRKQ9NRH2 765 aa13.85□□□□□ -0.19
AP000439.1-201ENST00000544004 A0A0G2JMZ2 1700 aa13.84□□□□□ -0.19
AP000439.1-201ENST00000544004 IGFBP4P22692 258 aa13.84□□□□□ -0.19
AP000439.1-201ENST00000544004 DYNLL1P63167 89 aaKnown RBP13.84□□□□□ -0.19
AP000439.1-201ENST00000544004 ADGRE1Q14246 886 aa13.84□□□□□ -0.19
AP000439.1-201ENST00000544004 COG2Q14746 738 aa13.84□□□□□ -0.19
AP000439.1-201ENST00000544004 ABCB5Q2M3G0 1257 aa13.84□□□□□ -0.19
AP000439.1-201ENST00000544004 CERKLQ49MI3 558 aaPredicted RBP13.84□□□□□ -0.19
AP000439.1-201ENST00000544004 NECAB3Q96P71 396 aaPredicted RBP13.84□□□□□ -0.19
AP000439.1-201ENST00000544004 MEIS3Q99687 375 aa13.84□□□□□ -0.19
AP000439.1-201ENST00000544004 HOXC10Q9NYD6 342 aa13.84□□□□□ -0.19
AP000439.1-201ENST00000544004 SERPINB13Q9UIV8 391 aa13.84□□□□□ -0.19
AP000439.1-201ENST00000544004 DCDC2CA8MYV0 355 aa13.83□□□□□ -0.2
AP000439.1-201ENST00000544004 TIMP1P01033 207 aa13.83□□□□□ -0.2
AP000439.1-201ENST00000544004 PLS1Q14651 629 aa13.83□□□□□ -0.2
AP000439.1-201ENST00000544004 ALDH1L2Q3SY69 923 aa13.83□□□□□ -0.2
AP000439.1-201ENST00000544004 ANKRD33Q7Z3H0 272 aa13.83□□□□□ -0.2
AP000439.1-201ENST00000544004 NCAPG2Q86XI2 1143 aa13.83□□□□□ -0.2
AP000439.1-201ENST00000544004 TOX2Q96NM4 488 aa13.83□□□□□ -0.2
AP000439.1-201ENST00000544004 MROH8Q9H579 483 aa13.83□□□□□ -0.2
AP000439.1-201ENST00000544004 CABP5Q9NP86 173 aa13.83□□□□□ -0.2
AP000439.1-201ENST00000544004 SMC4Q9NTJ3 1288 aa13.83□□□□□ -0.2
AP000439.1-201ENST00000544004 ZNF521Q96K83 1311 aa13.83□□□□□ -0.2
AP000439.1-201ENST00000544004 GBF1Q92538 1859 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 XIRP2A4UGR9 3374 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 NCOR1O75376 2440 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 USP5P45974 858 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 TMEM240Q5SV17 173 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 MFSD5Q6N075 450 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 C16orf59Q7L2K0 433 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 ABRAQ8N0Z2 381 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 TANGO6Q9C0B7 1094 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 EHD4Q9H223 541 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 STARD7Q9NQZ5 370 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 NRBP1Q9UHY1 535 aa13.82□□□□□ -0.2
AP000439.1-201ENST00000544004 BDP1A6H8Y1 2624 aa13.81□□□□□ -0.2
AP000439.1-201ENST00000544004 CYP2E1P05181 493 aaPredicted RBP13.81□□□□□ -0.2
AP000439.1-201ENST00000544004 BMP1P13497 986 aa13.81□□□□□ -0.2
AP000439.1-201ENST00000544004 GUCY1A2P33402 732 aa13.81□□□□□ -0.2
AP000439.1-201ENST00000544004 PPIGQ13427 754 aaKnown RBP eCLIP13.81□□□□□ -0.2
AP000439.1-201ENST00000544004 TTC39AQ5SRH9 613 aa13.81□□□□□ -0.2
AP000439.1-201ENST00000544004 RASIP1Q5U651 963 aa13.81□□□□□ -0.2
AP000439.1-201ENST00000544004 TBX21Q9UL17 535 aa13.81□□□□□ -0.2
AP000439.1-201ENST00000544004 SYNGAP1Q96PV0 1343 aa13.81□□□□□ -0.2
AP000439.1-201ENST00000544004 REV3LO60673 3130 aa13.81□□□□□ -0.2
AP000439.1-201ENST00000544004 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
AP000439.1-201ENST00000544004 A0A1W2PRG0 241 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 ADAMTS4O75173 837 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 ACRP10323 421 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 FCER1AP12319 257 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 TAL1P17542 331 aaPredicted RBP13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 SHMT1P34896 483 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 ACLYP53396 1101 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 MTX1Q13505 466 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 SEPT2Q15019 361 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 CCDC174Q6PII3 467 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 TTC6Q86TZ1 520 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 FAM9BQ8IZU0 186 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 MB21D1Q8N884 522 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 NUP133Q8WUM0 1156 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 LENG1Q96BZ8 264 aaPredicted RBP13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 TINF2Q9BSI4 451 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 TSEN34Q9BSV6 310 aaKnown RBP13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 LRFN3Q9BTN0 628 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 CXXC1Q9P0U4 656 aaPredicted RBP13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 MSRAQ9UJ68 235 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 NOB1Q9ULX3 412 aaKnown RBP13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 HCN4Q9Y3Q4 1203 aa13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 ARIH1Q9Y4X5 557 aaPredicted RBP13.8□□□□□ -0.2
AP000439.1-201ENST00000544004 COL11A1P12107 1806 aaPredicted RBP13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 ZNF865P0CJ78 1059 aaPredicted RBP13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 AKR1A1P14550 325 aa13.79□□□□□ -0.2
AP000439.1-201ENST00000544004 CSF2RAP15509 400 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms