RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 UBOX5O94941 541 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 SSRP1Q08945 709 aaKnown RBP9.28□□□□□ -0.92
SMCO2-206ENST00000543991 GRIK4Q16099 956 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 PRAMEF13Q5VWM6 474 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 SHISA2Q6UWI4 295 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 HOMER1Q86YM7 354 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMCO2-206ENST00000543991 TMEM192Q8IY95 271 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 APPBP2Q92624 585 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 SLC6A18Q96N87 628 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 FOXQ1Q9C009 403 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 EPN3Q9H201 632 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 AKTIPQ9H8T0 292 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 FANCLQ9NW38 375 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 TMEM260Q9NX78 707 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 SUCOQ9UBS9 1254 aaKnown RBP9.28□□□□□ -0.92
SMCO2-206ENST00000543991 PCOLCE2Q9UKZ9 415 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 PTPRGP23470 1445 aa9.28□□□□□ -0.92
SMCO2-206ENST00000543991 WRNQ14191 1432 aaPredicted RBP eCLIP9.28□□□□□ -0.92
SMCO2-206ENST00000543991 RUSC2Q8N2Y8 1516 aa9.27□□□□□ -0.93
SMCO2-206ENST00000543991 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.27□□□□□ -0.93
SMCO2-206ENST00000543991 ESYT3A0FGR9 886 aa9.27□□□□□ -0.93
SMCO2-206ENST00000543991 SUSD5O60279 629 aa9.27□□□□□ -0.93
SMCO2-206ENST00000543991 PODNQ7Z5L7 613 aa9.27□□□□□ -0.93
SMCO2-206ENST00000543991 LENG1Q96BZ8 264 aaPredicted RBP9.27□□□□□ -0.93
SMCO2-206ENST00000543991 KIAA0586Q9BVV6 1533 aa9.26□□□□□ -0.93
SMCO2-206ENST00000543991 SPATA31C1P0DKV0 1188 aa9.26□□□□□ -0.93
SMCO2-206ENST00000543991 SQSTM1Q13501 440 aa9.26□□□□□ -0.93
SMCO2-206ENST00000543991 BEND7Q8N7W2 519 aaPredicted RBP9.26□□□□□ -0.93
SMCO2-206ENST00000543991 BAHD1Q8TBE0 780 aaPredicted RBP9.26□□□□□ -0.93
SMCO2-206ENST00000543991 CEP41Q9BYV8 373 aa9.26□□□□□ -0.93
SMCO2-206ENST00000543991 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMCO2-206ENST00000543991 MAP3K4Q9Y6R4 1608 aa9.26□□□□□ -0.93
SMCO2-206ENST00000543991 EPRSP07814 1512 aaKnown RBP9.26□□□□□ -0.93
SMCO2-206ENST00000543991 PPM1GO15355 546 aaPredicted RBP9.25□□□□□ -0.93
SMCO2-206ENST00000543991 SART1O43290 800 aaKnown RBP9.25□□□□□ -0.93
SMCO2-206ENST00000543991 CLEC3AO75596 197 aa9.25□□□□□ -0.93
SMCO2-206ENST00000543991 LRIG2O94898 1065 aa9.25□□□□□ -0.93
SMCO2-206ENST00000543991 ALX3O95076 343 aa9.25□□□□□ -0.93
SMCO2-206ENST00000543991 PREPP48147 710 aa9.25□□□□□ -0.93
SMCO2-206ENST00000543991 Q6ZS46 218 aa9.25□□□□□ -0.93
SMCO2-206ENST00000543991 ARMCX6Q7L4S7 300 aa9.25□□□□□ -0.93
SMCO2-206ENST00000543991 MFSD2AQ8NA29 543 aa9.25□□□□□ -0.93
SMCO2-206ENST00000543991 ACSS3Q9H6R3 686 aa9.25□□□□□ -0.93
SMCO2-206ENST00000543991 USP21Q9UK80 565 aa9.25□□□□□ -0.93
SMCO2-206ENST00000543991 LEMD3Q9Y2U8 911 aa9.25□□□□□ -0.93
SMCO2-206ENST00000543991 IQCA1LA6NCM1 817 aa9.24□□□□□ -0.93
SMCO2-206ENST00000543991 USP11P51784 963 aa9.24□□□□□ -0.93
SMCO2-206ENST00000543991 ZNF143P52747 638 aaPredicted RBP9.24□□□□□ -0.93
SMCO2-206ENST00000543991 SLC10A6Q3KNW5 377 aa9.24□□□□□ -0.93
SMCO2-206ENST00000543991 PPFIBP1Q86W92 1011 aa9.24□□□□□ -0.93
SMCO2-206ENST00000543991 SMARCC1Q92922 1105 aaPredicted RBP9.24□□□□□ -0.93
SMCO2-206ENST00000543991 SPATA9Q9BWV2 254 aa9.24□□□□□ -0.93
SMCO2-206ENST00000543991 CNTNAP5Q8WYK1 1306 aa9.24□□□□□ -0.93
SMCO2-206ENST00000543991 WIPF1O43516 503 aa9.23□□□□□ -0.93
SMCO2-206ENST00000543991 GAS2O43903 313 aaKnown RBP9.23□□□□□ -0.93
SMCO2-206ENST00000543991 NAT2P11245 290 aa9.23□□□□□ -0.93
SMCO2-206ENST00000543991 GLB1P16278 677 aa9.23□□□□□ -0.93
SMCO2-206ENST00000543991 NRG1Q02297 640 aaPredicted RBP9.23□□□□□ -0.93
SMCO2-206ENST00000543991 RNF187Q5TA31 235 aaPredicted RBP9.23□□□□□ -0.93
SMCO2-206ENST00000543991 C16orf86Q6ZW13 317 aa9.23□□□□□ -0.93
SMCO2-206ENST00000543991 ANKRD13AQ8IZ07 590 aa9.23□□□□□ -0.93
SMCO2-206ENST00000543991 LRRC47Q8N1G4 583 aaKnown RBP9.23□□□□□ -0.93
SMCO2-206ENST00000543991 XAGE3Q8WTP9 111 aa9.23□□□□□ -0.93
SMCO2-206ENST00000543991 PPP1R13LQ8WUF5 828 aa9.23□□□□□ -0.93
SMCO2-206ENST00000543991 NACC1Q96RE7 527 aa9.23□□□□□ -0.93
SMCO2-206ENST00000543991 SLKQ9H2G2 1235 aaPredicted RBP9.23□□□□□ -0.93
SMCO2-206ENST00000543991 PTCH2Q9Y6C5 1203 aa9.23□□□□□ -0.93
SMCO2-206ENST00000543991 ANKRD34BA5PLL1 514 aa9.22□□□□□ -0.93
SMCO2-206ENST00000543991 C9orf172C9J069 976 aa9.22□□□□□ -0.93
SMCO2-206ENST00000543991 TP53P04637 393 aaPredicted RBP9.22□□□□□ -0.93
SMCO2-206ENST00000543991 RAB6AP20340 208 aa9.22□□□□□ -0.93
SMCO2-206ENST00000543991 HSPA2P54652 639 aa9.22□□□□□ -0.93
SMCO2-206ENST00000543991 LONRF2Q1L5Z9 754 aa9.22□□□□□ -0.93
SMCO2-206ENST00000543991 TDRD10Q5VZ19 366 aaKnown RBP9.22□□□□□ -0.93
SMCO2-206ENST00000543991 KIAA0907Q7Z7F0 614 aaPredicted RBP9.22□□□□□ -0.93
SMCO2-206ENST00000543991 SGSM3Q96HU1 749 aa9.22□□□□□ -0.93
SMCO2-206ENST00000543991 YIPF2Q9BWQ6 316 aa9.22□□□□□ -0.93
SMCO2-206ENST00000543991 CEP131Q9UPN4 1083 aa9.22□□□□□ -0.93
SMCO2-206ENST00000543991 UHRF1BP1LA0JNW5 1464 aa9.21□□□□□ -0.93
SMCO2-206ENST00000543991 ADAMTSL3P82987 1691 aa9.21□□□□□ -0.93
SMCO2-206ENST00000543991 C9IYK1 514 aa9.21□□□□□ -0.94
SMCO2-206ENST00000543991 FAM153BP0C7A2 387 aa9.21□□□□□ -0.94
SMCO2-206ENST00000543991 CDPF1Q6NVV7 123 aa9.21□□□□□ -0.94
SMCO2-206ENST00000543991 ZSWIM2Q8NEG5 633 aa9.21□□□□□ -0.94
SMCO2-206ENST00000543991 FAM46AQ96IP4 442 aaKnown RBP9.21□□□□□ -0.94
SMCO2-206ENST00000543991 APBA2Q99767 749 aa9.21□□□□□ -0.94
SMCO2-206ENST00000543991 HAUS7Q99871 368 aa9.21□□□□□ -0.94
SMCO2-206ENST00000543991 FAM86C1Q9NVL1 165 aa9.21□□□□□ -0.94
SMCO2-206ENST00000543991 SUSD2Q9UGT4 822 aa9.21□□□□□ -0.94
SMCO2-206ENST00000543991 DAGLAQ9Y4D2 1042 aa9.21□□□□□ -0.94
SMCO2-206ENST00000543991 TNIKQ9UKE5 1360 aa9.21□□□□□ -0.94
SMCO2-206ENST00000543991 KIF21BO75037 1637 aa9.2□□□□□ -0.94
SMCO2-206ENST00000543991 AGRPO00253 132 aa9.2□□□□□ -0.94
SMCO2-206ENST00000543991 APBA3O96018 575 aa9.2□□□□□ -0.94
SMCO2-206ENST00000543991 NOS3P29474 1203 aa9.2□□□□□ -0.94
SMCO2-206ENST00000543991 SV2CQ496J9 727 aa9.2□□□□□ -0.94
SMCO2-206ENST00000543991 ZC3H12BQ5HYM0 836 aaKnown RBP9.2□□□□□ -0.94
SMCO2-206ENST00000543991 AXDND1Q5T1B0 1012 aaPredicted RBP9.2□□□□□ -0.94
SMCO2-206ENST00000543991 HEATR6Q6AI08 1181 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms