RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 PPP2R2CQ9Y2T4 447 aa15.35■□□□□ 0.05
PPME1-208ENST00000543525 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
PPME1-208ENST00000543525 CNTNAP5Q8WYK1 1306 aa15.34■□□□□ 0.05
PPME1-208ENST00000543525 hCG_1642624A0A1W2PR95 340 aa15.34■□□□□ 0.05
PPME1-208ENST00000543525 MECOMQ03112 1051 aa15.34■□□□□ 0.05
PPME1-208ENST00000543525 NR1I3Q14994 352 aa15.34■□□□□ 0.05
PPME1-208ENST00000543525 ZNF174Q15697 407 aa15.34■□□□□ 0.05
PPME1-208ENST00000543525 EZH2Q15910 746 aaKnown RBP15.34■□□□□ 0.05
PPME1-208ENST00000543525 EARS2Q5JPH6 523 aaKnown RBP15.34■□□□□ 0.05
PPME1-208ENST00000543525 CELF1Q92879 486 aaKnown RBP15.34■□□□□ 0.05
PPME1-208ENST00000543525 TNFRSF25Q93038 417 aa15.34■□□□□ 0.05
PPME1-208ENST00000543525 EPSTI1Q96J88 318 aa15.34■□□□□ 0.05
PPME1-208ENST00000543525 GSDMAQ96QA5 445 aa15.34■□□□□ 0.05
PPME1-208ENST00000543525 NYXQ9GZU5 481 aa15.34■□□□□ 0.05
PPME1-208ENST00000543525 A0A1B0GTH6 734 aa15.33■□□□□ 0.05
PPME1-208ENST00000543525 WTIPA6NIX2 430 aaPredicted RBP15.33■□□□□ 0.05
PPME1-208ENST00000543525 HIBADHP31937 336 aaKnown RBP15.33■□□□□ 0.05
PPME1-208ENST00000543525 AFMP43652 599 aa15.33■□□□□ 0.05
PPME1-208ENST00000543525 TRAPPC10P48553 1259 aa15.33■□□□□ 0.05
PPME1-208ENST00000543525 TC2NQ8N9U0 490 aa15.33■□□□□ 0.05
PPME1-208ENST00000543525 LINC00116Q8NCU8 138 aa15.33■□□□□ 0.05
PPME1-208ENST00000543525 ZNF384Q8TF68 577 aa15.33■□□□□ 0.05
PPME1-208ENST00000543525 SAMSN1Q9NSI8 373 aaKnown RBP15.33■□□□□ 0.05
PPME1-208ENST00000543525 ARPP21Q9UBL0 812 aaPredicted RBP15.33■□□□□ 0.05
PPME1-208ENST00000543525 MYH2Q9UKX2 1941 aa15.33■□□□□ 0.05
PPME1-208ENST00000543525 ZNF831Q5JPB2 1677 aa15.33■□□□□ 0.04
PPME1-208ENST00000543525 A0A087X0B3 334 aa15.33■□□□□ 0.04
PPME1-208ENST00000543525 RPS8P62241 208 aaKnown RBP15.33■□□□□ 0.04
PPME1-208ENST00000543525 ATP2C1P98194 919 aaPredicted RBP15.33■□□□□ 0.04
PPME1-208ENST00000543525 DPYDQ12882 1025 aa15.33■□□□□ 0.04
PPME1-208ENST00000543525 PTPN21Q16825 1174 aa15.33■□□□□ 0.04
PPME1-208ENST00000543525 SBK1Q52WX2 424 aa15.33■□□□□ 0.04
PPME1-208ENST00000543525 FBXO38Q6PIJ6 1188 aa15.33■□□□□ 0.04
PPME1-208ENST00000543525 BICDL1Q6ZP65 573 aa15.33■□□□□ 0.04
PPME1-208ENST00000543525 MED15Q96RN5 788 aa15.33■□□□□ 0.04
PPME1-208ENST00000543525 CTAGE1Q96RT6 745 aa15.33■□□□□ 0.04
PPME1-208ENST00000543525 DCP1AQ9NPI6 582 aaPredicted RBP15.33■□□□□ 0.04
PPME1-208ENST00000543525 SYNRGQ9UMZ2 1314 aa15.32■□□□□ 0.04
PPME1-208ENST00000543525 VWA3AA6NCI4 1184 aa15.32■□□□□ 0.04
PPME1-208ENST00000543525 SCG2P13521 617 aa15.32■□□□□ 0.04
PPME1-208ENST00000543525 NLRP5P59047 1200 aa15.32■□□□□ 0.04
PPME1-208ENST00000543525 SRBD1Q8N5C6 995 aaKnown RBP15.32■□□□□ 0.04
PPME1-208ENST00000543525 MNS1Q8NEH6 495 aa15.32■□□□□ 0.04
PPME1-208ENST00000543525 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
PPME1-208ENST00000543525 CAMKK2Q96RR4 588 aa15.32■□□□□ 0.04
PPME1-208ENST00000543525 BAZ2AQ9UIF9 1905 aaKnown RBP15.32■□□□□ 0.04
PPME1-208ENST00000543525 CNTNAP4Q9C0A0 1308 aa15.32■□□□□ 0.04
PPME1-208ENST00000543525 AKR1B15C9JRZ8 316 aaPredicted RBP15.31■□□□□ 0.04
PPME1-208ENST00000543525 KCNQ2O43526 872 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 URI1O94763 535 aaPredicted RBP15.31■□□□□ 0.04
PPME1-208ENST00000543525 CASQ1P31415 396 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 KIF5BP33176 963 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 NT5C2P49902 561 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 ADKP55263 362 aaKnown RBP15.31■□□□□ 0.04
PPME1-208ENST00000543525 PTGDRQ13258 359 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 CUL4BQ13620 913 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 NPY5RQ15761 445 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 ERCC6LQ2NKX8 1250 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 FILIP1LQ4L180 1135 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 TBC1D9BQ66K14 1250 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 SPTY2D1Q68D10 685 aaPredicted RBP15.31■□□□□ 0.04
PPME1-208ENST00000543525 PANX2Q96RD6 677 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 TPM1P09493 284 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 PFKFB3Q16875 520 aaPredicted RBP15.31■□□□□ 0.04
PPME1-208ENST00000543525 FAM182BQ5T319 152 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 PPFIBP1Q86W92 1011 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 KRT222Q8N1A0 295 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 IQUBQ8NA54 791 aa15.31■□□□□ 0.04
PPME1-208ENST00000543525 H2AFXP16104 143 aaPredicted RBP15.3■□□□□ 0.04
PPME1-208ENST00000543525 CALML3P27482 149 aa15.3■□□□□ 0.04
PPME1-208ENST00000543525 GABPB1Q06547 395 aaPredicted RBP15.3■□□□□ 0.04
PPME1-208ENST00000543525 FAM47AQ5JRC9 791 aa15.3■□□□□ 0.04
PPME1-208ENST00000543525 KLHL10Q6JEL2 608 aa15.3■□□□□ 0.04
PPME1-208ENST00000543525 UBXN4Q92575 508 aa15.3■□□□□ 0.04
PPME1-208ENST00000543525 NAA15Q9BXJ9 866 aaKnown RBP15.3■□□□□ 0.04
PPME1-208ENST00000543525 PRDM4Q9UKN5 801 aa15.3■□□□□ 0.04
PPME1-208ENST00000543525 LAMB1P07942 1786 aa15.3■□□□□ 0.04
PPME1-208ENST00000543525 TSPY2A6NKD2 308 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 PPP1R3GB7ZBB8 358 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 ZBTB22O15209 634 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 NPHP1O15259 732 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 IGSF3O75054 1194 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 CD44P16070 742 aaKnown RBP15.29■□□□□ 0.04
PPME1-208ENST00000543525 CDKAL1Q5VV42 579 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 PIK3AP1Q6ZUJ8 805 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 SETDB2Q96T68 719 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 TFCP2L1Q9NZI6 479 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 MAST2Q6P0Q8 1798 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 CASZ1Q86V15 1759 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 TNS1Q9HBL0 1735 aaKnown RBP15.29■□□□□ 0.04
PPME1-208ENST00000543525 WNT7AO00755 349 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 GTPBP6O43824 516 aaPredicted RBP15.29■□□□□ 0.04
PPME1-208ENST00000543525 NMT2O60551 498 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 KLRK1P26718 216 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 STX17P56962 302 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 GNG11P61952 73 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 ARHGAP29Q52LW3 1261 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 CCDC178Q5BJE1 867 aa15.29■□□□□ 0.04
PPME1-208ENST00000543525 NOM1Q5C9Z4 860 aaKnown RBP15.29■□□□□ 0.04
PPME1-208ENST00000543525 TOGARAM2Q6ZUX3 1019 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms