RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 FBXO11Q86XK2 927 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 FERMT2Q96AC1 680 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 KCNG1Q9UIX4 513 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 BECN2A8MW95 431 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 KLRK1P26718 216 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 TBC1D10BQ4KMP7 808 aaPredicted RBP9.12□□□□□ -0.95
TRIM59-208ENST00000543469 STXBP4Q6ZWJ1 553 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 KRT26Q7Z3Y9 468 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 ZKSCAN3Q9BRR0 538 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 SPZ1Q9BXG8 430 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 VAT1LQ9HCJ6 419 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 QSER1Q2KHR3 1735 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 ROBO3Q96MS0 1386 aa9.12□□□□□ -0.95
TRIM59-208ENST00000543469 ABCB11O95342 1321 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 WDR46O15213 610 aaKnown RBP9.11□□□□□ -0.95
TRIM59-208ENST00000543469 PTMAP06454 111 aaKnown RBP9.11□□□□□ -0.95
TRIM59-208ENST00000543469 NFKBIBQ15653 356 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 SYDE2Q5VT97 1194 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 HOMER1Q86YM7 354 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 CCDC144CPQ8IYA2 1237 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 GPCPD1Q9NPB8 672 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 TNS1Q9HBL0 1735 aaKnown RBP9.11□□□□□ -0.95
TRIM59-208ENST00000543469 SLC26A4O43511 780 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 SYT1P21579 422 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 ZNF280AP59817 542 aaPredicted RBP9.11□□□□□ -0.95
TRIM59-208ENST00000543469 AP3B2Q13367 1082 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 TMTC3Q6ZXV5 915 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 HOXC10Q9NYD6 342 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 TPCN1Q9ULQ1 816 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 V9GY48 417 aaPredicted RBP9.11□□□□□ -0.95
TRIM59-208ENST00000543469 PNMA6FA0A0J9YX94 578 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 PRPF40AO75400 957 aaKnown RBP9.11□□□□□ -0.95
TRIM59-208ENST00000543469 CCDC192P0DO97 292 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 STAT2P52630 851 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 MAP3K9P80192 1104 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 TCEANC2Q96MN5 208 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 SYT17Q9BSW7 474 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 LY9Q9HBG7 655 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 RMND1Q9NWS8 449 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 TRAK2O60296 914 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 TPM1P09493 284 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 VEGFAP15692 232 aaPredicted RBP9.11□□□□□ -0.95
TRIM59-208ENST00000543469 RASA3Q14644 834 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 CHST3Q7LGC8 479 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 MB21D1Q8N884 522 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 NUP62CLQ9H1M0 184 aa9.11□□□□□ -0.95
TRIM59-208ENST00000543469 EPB41L4AQ9HCS5 686 aaPredicted RBP9.11□□□□□ -0.95
TRIM59-208ENST00000543469 NEDD4P46934 1319 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 SLC4A8Q2Y0W8 1093 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 ADCK5Q3MIX3 580 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 CCDC183Q5T5S1 534 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 NLRX1Q86UT6 975 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 TXNRD3Q86VQ6 643 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 REXO1Q8N1G1 1221 aaKnown RBP9.1□□□□□ -0.95
TRIM59-208ENST00000543469 SLC10A4Q96EP9 437 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 USP17L10C9JJH3 530 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 FGFR1OPO95684 399 aaKnown RBP9.1□□□□□ -0.95
TRIM59-208ENST00000543469 EPHX2P34913 555 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 KRT40Q6A162 431 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 PPP4R3AQ6IN85 833 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 C7orf43Q8WVR3 580 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.1□□□□□ -0.95
TRIM59-208ENST00000543469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRIM59-208ENST00000543469 IVNS1ABPQ9Y6Y0 642 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 BRD1O95696 1058 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 KRT18P05783 430 aaKnown RBP9.1□□□□□ -0.95
TRIM59-208ENST00000543469 PLCD1P51178 756 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 BLIDQ8IZY5 108 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 TNMDQ9H2S6 317 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 MTMR4Q9NYA4 1195 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 MAP3K20Q9NYL2 800 aaKnown RBP9.1□□□□□ -0.95
TRIM59-208ENST00000543469 GPRC5DQ9NZD1 345 aa9.1□□□□□ -0.95
TRIM59-208ENST00000543469 GCOM1H8Y6P7 765 aaPredicted RBP9.09□□□□□ -0.95
TRIM59-208ENST00000543469 CUTAO60888 179 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 POLR2MP0CAP2 368 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 EVCP57679 992 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 ANKRD13AQ8IZ07 590 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 NSUN7Q8NE18 718 aaKnown RBP9.09□□□□□ -0.95
TRIM59-208ENST00000543469 GMCL1P1Q8NEA9 526 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 TMEM47Q9BQJ4 181 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 ATP2B1P20020 1258 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 KIF22Q14807 665 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 SCYL3Q8IZE3 742 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 CDHR1Q96JP9 859 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 SMTNL1A8MU46 457 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 USP17L15C9J2P7 530 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 USP17L13C9JLJ4 530 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 USP17L11C9JVI0 530 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 USP17L18D6R9N7 530 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 USP17L22D6RA61 530 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 USP17L17D6RBQ6 530 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 USP17L19D6RCP7 530 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 USP17L20D6RJB6 530 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 SPTLC2O15270 562 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 FGRP09769 529 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 RASA1P20936 1047 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 UBA7P41226 1012 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 USP17L24Q0WX57 530 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 HAUS3Q68CZ6 603 aa9.09□□□□□ -0.95
TRIM59-208ENST00000543469 PAXIP1Q6ZW49 1069 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms