RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 MMEL1Q495T6 779 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 CYB5RLQ6IPT4 315 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 KIF24Q5T7B8 1368 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 ALS2CLQ60I27 953 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 CTAGE3PQ8IX95 158 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 MGARPQ8TDB4 240 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 ZBTB40Q9NUA8 1239 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 RNF14Q9UBS8 474 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 CALCRLQ16602 461 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 ARHGEF18Q6ZSZ5 1173 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 ST13P4Q8IZP2 240 aaPredicted RBP21.26■□□□□ 0.99
HDAC4-215ENST00000543185 CDKL2Q92772 493 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 PHF23Q9BUL5 403 aaPredicted RBP21.26■□□□□ 0.99
HDAC4-215ENST00000543185 MCM9Q9NXL9 1143 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 SLC17A8Q8NDX2 589 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 CSRNP1Q96S65 589 aa21.26■□□□□ 0.99
HDAC4-215ENST00000543185 FAM135BQ49AJ0 1406 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 CCDC151A5D8V7 595 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 STAT1P42224 750 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 MX2P20592 715 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 GARSP41250 739 aaKnown RBP21.25■□□□□ 0.99
HDAC4-215ENST00000543185 RBM6P78332 1123 aaKnown RBP21.25■□□□□ 0.99
HDAC4-215ENST00000543185 ASPHQ12797 758 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 KRT25Q7Z3Z0 450 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 FAM212AQ96EL1 285 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 TTI1O43156 1089 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 MCTP2Q6DN12 878 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 MRPL44Q9H9J2 332 aaKnown RBP21.25■□□□□ 0.99
HDAC4-215ENST00000543185 BAG2O95816 211 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 SERPINI1Q99574 410 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 TPCN1Q9ULQ1 816 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 MAP3K5Q99683 1374 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 C10orf76Q5T2E6 689 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 TRMT1LQ7Z2T5 733 aaKnown RBP21.25■□□□□ 0.99
HDAC4-215ENST00000543185 KDM5BQ9UGL1 1544 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 JADE1Q6IE81 842 aa21.25■□□□□ 0.99
HDAC4-215ENST00000543185 NOC2LQ9Y3T9 749 aaKnown RBP21.25■□□□□ 0.99
HDAC4-215ENST00000543185 POLR1AO95602 1720 aaPredicted RBP21.24■□□□□ 0.99
HDAC4-215ENST00000543185 PRAG1Q86YV5 1406 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 DNMT1P26358 1616 aaKnown RBP21.24■□□□□ 0.99
HDAC4-215ENST00000543185 KCNJ18B7U540 433 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 EIF3BP55884 814 aaKnown RBP21.24■□□□□ 0.99
HDAC4-215ENST00000543185 ETF1P62495 437 aaKnown RBP21.24■□□□□ 0.99
HDAC4-215ENST00000543185 KCNJ12Q14500 433 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 PDE11AQ9HCR9 933 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 ATP5HO75947 161 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 TCEANC2Q96MN5 208 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 ZBTB3Q9H5J0 574 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 ADCY8P40145 1251 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 TTC38Q5R3I4 469 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 RNF34Q969K3 372 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 MRPL46Q9H2W6 279 aaKnown RBP21.24■□□□□ 0.99
HDAC4-215ENST00000543185 KIAA1468Q9P260 1216 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 NME8Q8N427 588 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 ADALQ6DHV7 355 aa21.24■□□□□ 0.99
HDAC4-215ENST00000543185 N4BP2L2Q92802 583 aaPredicted RBP21.23■□□□□ 0.99
HDAC4-215ENST00000543185 PPP2R2CQ9Y2T4 447 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 SOS2Q07890 1332 aaPredicted RBP21.23■□□□□ 0.99
HDAC4-215ENST00000543185 NBPF10Q6P3W6 841 aaKnown RBP21.23■□□□□ 0.99
HDAC4-215ENST00000543185 EMILIN1Q9Y6C2 1016 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 SKAP1Q86WV1 359 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 YY1AP1Q9H869 796 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 DNM3Q9UQ16 869 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 JRKLQ9Y4A0 524 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 NOS1P29475 1434 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 UGGT2Q9NYU1 1516 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 DYNC1I2Q13409 638 aaKnown RBP21.23■□□□□ 0.99
HDAC4-215ENST00000543185 TRIM15Q9C019 465 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 RIMS2Q9UQ26 1411 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 H0YCG3 227 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 SCYL3Q8IZE3 742 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 BACH1O14867 736 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 RNASE9P60153 205 aaKnown RBP21.23■□□□□ 0.99
HDAC4-215ENST00000543185 TYW1BQ6NUM6 668 aa21.23■□□□□ 0.99
HDAC4-215ENST00000543185 GUCY2FP51841 1108 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 DIXDC1Q155Q3 683 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 PPWD1Q96BP3 646 aaKnown RBP21.22■□□□□ 0.99
HDAC4-215ENST00000543185 BABAM1Q9NWV8 329 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 GSTA1P08263 222 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 GSTA2P09210 222 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 ANKFY1Q9P2R3 1169 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 FAM8A1Q9UBU6 413 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 BEND3Q5T5X7 828 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 NME9Q86XW9 330 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 GDAP1L1Q96MZ0 367 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 XPO4Q9C0E2 1151 aaKnown RBP21.22■□□□□ 0.99
HDAC4-215ENST00000543185 RAB20Q9NX57 234 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 ARHGEF35A5YM69 484 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 ATF2P15336 505 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 IRX5P78411 483 aaPredicted RBP21.22■□□□□ 0.99
HDAC4-215ENST00000543185 IFT88Q13099 833 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 RETREG2Q8NC44 543 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 TSC22D3Q99576 134 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 SLF1Q9BQI6 1058 aa21.22■□□□□ 0.99
HDAC4-215ENST00000543185 SRRM1Q8IYB3 904 aaKnown RBP21.21■□□□□ 0.99
HDAC4-215ENST00000543185 TRIM11Q96F44 468 aa21.21■□□□□ 0.99
HDAC4-215ENST00000543185 SATB2Q9UPW6 733 aa21.21■□□□□ 0.99
HDAC4-215ENST00000543185 CREB3O43889 395 aa21.21■□□□□ 0.99
HDAC4-215ENST00000543185 GPTP24298 496 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms