RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 GCLCP48506 637 aaPredicted RBP21.76■■□□□ 1.07
COPS7A-216ENST00000543170 USP17L24Q0WX57 530 aa21.76■■□□□ 1.07
COPS7A-216ENST00000543170 COL13A1Q5TAT6 717 aaPredicted RBP21.76■■□□□ 1.07
COPS7A-216ENST00000543170 MAP4K1Q92918 833 aa21.76■■□□□ 1.07
COPS7A-216ENST00000543170 MKL1Q969V6 931 aa21.76■■□□□ 1.07
COPS7A-216ENST00000543170 GOPCQ9HD26 462 aa21.76■■□□□ 1.07
COPS7A-216ENST00000543170 PARP14Q460N5 1801 aa21.76■■□□□ 1.07
COPS7A-216ENST00000543170 WDR46O15213 610 aaKnown RBP21.75■■□□□ 1.07
COPS7A-216ENST00000543170 RANBP6O60518 1105 aaKnown RBP21.75■■□□□ 1.07
COPS7A-216ENST00000543170 NOVP48745 357 aa21.75■■□□□ 1.07
COPS7A-216ENST00000543170 KIAA1211Q6ZU35 1233 aa21.75■■□□□ 1.07
COPS7A-216ENST00000543170 INCENPQ9NQS7 918 aa21.75■■□□□ 1.07
COPS7A-216ENST00000543170 TOMM22Q9NS69 142 aa21.75■■□□□ 1.07
COPS7A-216ENST00000543170 TCP11L1Q9NUJ3 509 aa21.75■■□□□ 1.07
COPS7A-216ENST00000543170 CPA4Q9UI42 421 aa21.75■■□□□ 1.07
COPS7A-216ENST00000543170 NEDD4P46934 1319 aa21.75■■□□□ 1.07
COPS7A-216ENST00000543170 A0A0G2JMZ2 1700 aa21.75■■□□□ 1.07
COPS7A-216ENST00000543170 RLFQ13129 1914 aa21.74■■□□□ 1.07
COPS7A-216ENST00000543170 ATP2B2Q01814 1243 aa21.74■■□□□ 1.07
COPS7A-216ENST00000543170 FAM110CQ1W6H9 321 aa21.74■■□□□ 1.07
COPS7A-216ENST00000543170 CATSPERGQ6ZRH7 1159 aa21.74■■□□□ 1.07
COPS7A-216ENST00000543170 CTU1Q7Z7A3 348 aaKnown RBP21.74■■□□□ 1.07
COPS7A-216ENST00000543170 ESR2Q92731 530 aa21.74■■□□□ 1.07
COPS7A-216ENST00000543170 LSG1Q9H089 658 aaKnown RBP21.74■■□□□ 1.07
COPS7A-216ENST00000543170 RPAP3Q9H6T3 665 aaPredicted RBP21.74■■□□□ 1.07
COPS7A-216ENST00000543170 HERVK_113P62684 666 aa21.73■■□□□ 1.07
COPS7A-216ENST00000543170 LACTBP83111 547 aaPredicted RBP21.73■■□□□ 1.07
COPS7A-216ENST00000543170 RRP12Q5JTH9 1297 aaKnown RBP21.73■■□□□ 1.07
COPS7A-216ENST00000543170 KIAA1755Q5JYT7 1200 aa21.73■■□□□ 1.07
COPS7A-216ENST00000543170 LBX2Q6XYB7 198 aa21.73■■□□□ 1.07
COPS7A-216ENST00000543170 GMCL1P1Q8NEA9 526 aa21.73■■□□□ 1.07
COPS7A-216ENST00000543170 CNNM2Q9H8M5 875 aa21.73■■□□□ 1.07
COPS7A-216ENST00000543170 IL17RBQ9NRM6 502 aa21.73■■□□□ 1.07
COPS7A-216ENST00000543170 CLIP2Q9UDT6 1046 aa21.73■■□□□ 1.07
COPS7A-216ENST00000543170 MGAMO43451 1857 aa21.73■■□□□ 1.07
COPS7A-216ENST00000543170 CYP21A2P08686 494 aa21.72■■□□□ 1.07
COPS7A-216ENST00000543170 ARHGEF6Q15052 776 aa21.72■■□□□ 1.07
COPS7A-216ENST00000543170 KRT23Q9C075 422 aa21.72■■□□□ 1.07
COPS7A-216ENST00000543170 MORF4L1Q9UBU8 362 aa21.72■■□□□ 1.07
COPS7A-216ENST00000543170 RBM8AQ9Y5S9 174 aaKnown RBP21.72■■□□□ 1.07
COPS7A-216ENST00000543170 MYPNQ86TC9 1320 aa21.72■■□□□ 1.07
COPS7A-216ENST00000543170 KIF22Q14807 665 aa21.71■■□□□ 1.07
COPS7A-216ENST00000543170 CD99L2Q8TCZ2 262 aa21.71■■□□□ 1.07
COPS7A-216ENST00000543170 P2RX7Q99572 595 aaKnown RBP21.71■■□□□ 1.07
COPS7A-216ENST00000543170 ANO2Q9NQ90 1003 aa21.71■■□□□ 1.07
COPS7A-216ENST00000543170 ZSWIM8A7E2V4 1837 aa21.71■■□□□ 1.07
COPS7A-216ENST00000543170 GNRH1P01148 92 aa21.7■■□□□ 1.06
COPS7A-216ENST00000543170 PKN2Q16513 984 aaKnown RBP21.7■■□□□ 1.06
COPS7A-216ENST00000543170 SPICE1Q8N0Z3 855 aa21.7■■□□□ 1.06
COPS7A-216ENST00000543170 ANKRD13CQ8N6S4 541 aa21.7■■□□□ 1.06
COPS7A-216ENST00000543170 TANGO6Q9C0B7 1094 aa21.7■■□□□ 1.06
COPS7A-216ENST00000543170 STX8Q9UNK0 236 aa21.7■■□□□ 1.06
COPS7A-216ENST00000543170 F5H6K3 240 aa21.69■■□□□ 1.06
COPS7A-216ENST00000543170 NMT2O60551 498 aa21.69■■□□□ 1.06
COPS7A-216ENST00000543170 NDUFB10O96000 172 aa21.69■■□□□ 1.06
COPS7A-216ENST00000543170 KLRC3Q07444 240 aa21.69■■□□□ 1.06
COPS7A-216ENST00000543170 CCDC178Q5BJE1 867 aa21.69■■□□□ 1.06
COPS7A-216ENST00000543170 LRRC47Q8N1G4 583 aaKnown RBP21.69■■□□□ 1.06
COPS7A-216ENST00000543170 TTC14Q96N46 770 aa21.69■■□□□ 1.06
COPS7A-216ENST00000543170 SPDYE16A6NNV3 312 aaPredicted RBP21.68■■□□□ 1.06
COPS7A-216ENST00000543170 B4E1Z4 1266 aa21.68■■□□□ 1.06
COPS7A-216ENST00000543170 KDM4AO75164 1064 aa21.68■■□□□ 1.06
COPS7A-216ENST00000543170 COG2Q14746 738 aa21.68■■□□□ 1.06
COPS7A-216ENST00000543170 OTOP1Q7RTM1 612 aa21.68■■□□□ 1.06
COPS7A-216ENST00000543170 IQCA1Q86XH1 822 aa21.68■■□□□ 1.06
COPS7A-216ENST00000543170 HOXC10Q9NYD6 342 aa21.68■■□□□ 1.06
COPS7A-216ENST00000543170 CAP1Q01518 475 aa21.67■■□□□ 1.06
COPS7A-216ENST00000543170 TRDNQ13061 729 aa21.67■■□□□ 1.06
COPS7A-216ENST00000543170 MB21D1Q8N884 522 aa21.67■■□□□ 1.06
COPS7A-216ENST00000543170 NKX2-3Q8TAU0 364 aa21.67■■□□□ 1.06
COPS7A-216ENST00000543170 GMCL1Q96IK5 515 aa21.67■■□□□ 1.06
COPS7A-216ENST00000543170 EFCC1Q9HA90 598 aa21.67■■□□□ 1.06
COPS7A-216ENST00000543170 RABGAP1Q9Y3P9 1069 aa21.67■■□□□ 1.06
COPS7A-216ENST00000543170 TRIM17Q9Y577 477 aa21.67■■□□□ 1.06
COPS7A-216ENST00000543170 FLOT1O75955 427 aa21.66■■□□□ 1.06
COPS7A-216ENST00000543170 TOP1P11387 765 aaKnown RBP21.66■■□□□ 1.06
COPS7A-216ENST00000543170 DSG3P32926 999 aa21.66■■□□□ 1.06
COPS7A-216ENST00000543170 FCGRTP55899 365 aa21.66■■□□□ 1.06
COPS7A-216ENST00000543170 NECTIN1Q15223 517 aa21.66■■□□□ 1.06
COPS7A-216ENST00000543170 FAM83BQ5T0W9 1011 aa21.66■■□□□ 1.06
COPS7A-216ENST00000543170 DGKHQ86XP1 1220 aa21.66■■□□□ 1.06
COPS7A-216ENST00000543170 MCOLN1Q9GZU1 580 aa21.66■■□□□ 1.06
COPS7A-216ENST00000543170 TXNRD2Q9NNW7 524 aa21.66■■□□□ 1.06
COPS7A-216ENST00000543170 ZSWIM5Q9P217 1185 aa21.66■■□□□ 1.06
COPS7A-216ENST00000543170 RBPJLQ9UBG7 517 aa21.66■■□□□ 1.06
COPS7A-216ENST00000543170 E7EWF7 191 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 RAD21O60216 631 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 CTGFP29279 349 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 PSMC4P43686 418 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 PRMT2P55345 433 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 ERVK-9P63128 1117 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 ERVK-24P63145 666 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 SLFN13Q68D06 897 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 RCSD1Q6JBY9 416 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 POTEEQ6S8J3 1075 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 TNS4Q8IZW8 715 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 GPRC5AQ8NFJ5 357 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 NCOA7Q8NI08 942 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 ARHGAP39Q9C0H5 1083 aa21.65■■□□□ 1.06
COPS7A-216ENST00000543170 SLC27A2O14975 620 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms