RNA–Protein interactions for RNA: ENST00000543026.5

DDX11-224, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-224ENST00000543026 PHF20Q9BVI0 1012 aa17.07■□□□□ 0.32
DDX11-224ENST00000543026 ZNF277Q9NRM2 450 aaPredicted RBP17.07■□□□□ 0.32
DDX11-224ENST00000543026 SWAP70Q9UH65 585 aa17.07■□□□□ 0.32
DDX11-224ENST00000543026 MAD2L2Q9UI95 211 aa17.07■□□□□ 0.32
DDX11-224ENST00000543026 ATF5Q9Y2D1 282 aaPredicted RBP17.07■□□□□ 0.32
DDX11-224ENST00000543026 SCG2P13521 617 aa17.06■□□□□ 0.32
DDX11-224ENST00000543026 KRT2P35908 639 aa17.06■□□□□ 0.32
DDX11-224ENST00000543026 FAM160A1Q05DH4 1040 aa17.06■□□□□ 0.32
DDX11-224ENST00000543026 LARGE2Q8N3Y3 721 aa17.06■□□□□ 0.32
DDX11-224ENST00000543026 MYO3BQ8WXR4 1341 aa17.06■□□□□ 0.32
DDX11-224ENST00000543026 TOP1P11387 765 aaKnown RBP17.06■□□□□ 0.32
DDX11-224ENST00000543026 AKR1B1P15121 316 aa17.06■□□□□ 0.32
DDX11-224ENST00000543026 POLD1P28340 1107 aa17.06■□□□□ 0.32
DDX11-224ENST00000543026 PTPAQ15257 358 aa17.06■□□□□ 0.32
DDX11-224ENST00000543026 PFKFB3Q16875 520 aaPredicted RBP17.06■□□□□ 0.32
DDX11-224ENST00000543026 ZFPM1Q8IX07 1006 aa17.06■□□□□ 0.32
DDX11-224ENST00000543026 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
DDX11-224ENST00000543026 COL4A5P29400 1685 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 MARCKSP29966 332 aaPredicted RBP17.05■□□□□ 0.32
DDX11-224ENST00000543026 IDI2Q9BXS1 227 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 KINO60870 393 aaKnown RBP17.05■□□□□ 0.32
DDX11-224ENST00000543026 CCDC192P0DO97 292 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 SHMT1P34896 483 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 NOVP48745 357 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 TOB1P50616 345 aaPredicted RBP17.05■□□□□ 0.32
DDX11-224ENST00000543026 TCP10Q12799 353 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 SNW1Q13573 536 aaKnown RBP17.05■□□□□ 0.32
DDX11-224ENST00000543026 RILPL1Q5EBL4 403 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 AXDND1Q5T1B0 1012 aaPredicted RBP17.05■□□□□ 0.32
DDX11-224ENST00000543026 RBM43Q6ZSC3 357 aaKnown RBP17.05■□□□□ 0.32
DDX11-224ENST00000543026 JMYQ8N9B5 988 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 ENGASEQ8NFI3 743 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 MTFR1LQ9H019 292 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 EHD4Q9H223 541 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 PDCL3Q9H2J4 239 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 BRMS1Q9HCU9 246 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 FAM198AQ9UFP1 575 aa17.05■□□□□ 0.32
DDX11-224ENST00000543026 R3HCC1Q9Y3T6 440 aaKnown RBP17.05■□□□□ 0.32
DDX11-224ENST00000543026 SIPA1L1O43166 1804 aa17.04■□□□□ 0.32
DDX11-224ENST00000543026 PALM3A6NDB9 673 aaPredicted RBP17.04■□□□□ 0.32
DDX11-224ENST00000543026 PPP6R2O75170 966 aa17.04■□□□□ 0.32
DDX11-224ENST00000543026 TGFB2P61812 414 aa17.04■□□□□ 0.32
DDX11-224ENST00000543026 CFAP100Q494V2 611 aa17.04■□□□□ 0.32
DDX11-224ENST00000543026 SOGA3Q5TF21 947 aa17.04■□□□□ 0.32
DDX11-224ENST00000543026 RASGRP2Q7LDG7 609 aa17.04■□□□□ 0.32
DDX11-224ENST00000543026 PIM2Q9P1W9 311 aa17.04■□□□□ 0.32
DDX11-224ENST00000543026 IGKV6D-41A0A0C4DH26 115 aa17.03■□□□□ 0.32
DDX11-224ENST00000543026 A0A1B0GVL5 298 aa17.03■□□□□ 0.32
DDX11-224ENST00000543026 RAD17O75943 681 aa17.03■□□□□ 0.32
DDX11-224ENST00000543026 PARP1P09874 1014 aaKnown RBP17.03■□□□□ 0.32
DDX11-224ENST00000543026 RSBN1LQ6PCB5 846 aaPredicted RBP17.03■□□□□ 0.32
DDX11-224ENST00000543026 LZTS2Q9BRK4 669 aa17.03■□□□□ 0.32
DDX11-224ENST00000543026 DHX36Q9H2U1 1008 aaKnown RBP17.03■□□□□ 0.32
DDX11-224ENST00000543026 MTMR4Q9NYA4 1195 aa17.03■□□□□ 0.32
DDX11-224ENST00000543026 GOLGA8HP0CJ92 632 aa17.03■□□□□ 0.32
DDX11-224ENST00000543026 SLC35G1Q2M3R5 365 aa17.03■□□□□ 0.32
DDX11-224ENST00000543026 FMR1NBQ8N0W7 255 aaPredicted RBP17.03■□□□□ 0.32
DDX11-224ENST00000543026 CABP5Q9NP86 173 aa17.03■□□□□ 0.32
DDX11-224ENST00000543026 PSMD14O00487 310 aa17.02■□□□□ 0.32
DDX11-224ENST00000543026 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
DDX11-224ENST00000543026 VEGFAP15692 232 aaPredicted RBP17.02■□□□□ 0.32
DDX11-224ENST00000543026 NDUFA8P51970 172 aa17.02■□□□□ 0.32
DDX11-224ENST00000543026 NLRP5P59047 1200 aa17.02■□□□□ 0.32
DDX11-224ENST00000543026 TYRO3Q06418 890 aa17.02■□□□□ 0.32
DDX11-224ENST00000543026 NPY5RQ15761 445 aa17.02■□□□□ 0.32
DDX11-224ENST00000543026 TDRD3Q9H7E2 651 aaKnown RBP17.02■□□□□ 0.32
DDX11-224ENST00000543026 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.02■□□□□ 0.32
DDX11-224ENST00000543026 GREB1LQ9C091 1923 aaPredicted RBP17.02■□□□□ 0.31
DDX11-224ENST00000543026 FAM205CA6NFA0 338 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 DDTLA6NHG4 134 aaPredicted RBP17.01■□□□□ 0.31
DDX11-224ENST00000543026 KLRF2D3W0D1 207 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 CTAGE5O15320 804 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 CMA1P23946 247 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 DALRD3Q5D0E6 543 aaKnown RBP17.01■□□□□ 0.31
DDX11-224ENST00000543026 CLEC10AQ8IUN9 316 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 ZSCAN29Q8IWY8 852 aaPredicted RBP17.01■□□□□ 0.31
DDX11-224ENST00000543026 GPKOWQ92917 476 aaPredicted RBP eCLIP17.01■□□□□ 0.31
DDX11-224ENST00000543026 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 MPHOSPH10O00566 681 aaKnown RBP17.01■□□□□ 0.31
DDX11-224ENST00000543026 CYTH3O43739 400 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 VIL1P09327 827 aaKnown RBP17.01■□□□□ 0.31
DDX11-224ENST00000543026 SLURP2P0DP57 97 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 ATP2B1P20020 1258 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 EIF6P56537 245 aaKnown RBP17.01■□□□□ 0.31
DDX11-224ENST00000543026 GLIPR1L2Q4G1C9 344 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 USP17L2Q6R6M4 530 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 SH3BP5LQ7L8J4 393 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 NIM1KQ8IY84 436 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 LRRC47Q8N1G4 583 aaKnown RBP17.01■□□□□ 0.31
DDX11-224ENST00000543026 TNFRSF25Q93038 417 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 PRMT6Q96LA8 375 aaPredicted RBP17.01■□□□□ 0.31
DDX11-224ENST00000543026 DNAJC18Q9H819 358 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.01■□□□□ 0.31
DDX11-224ENST00000543026 PCDHB6Q9Y5E3 794 aa17.01■□□□□ 0.31
DDX11-224ENST00000543026 USP17L5A8MUK1 530 aa17■□□□□ 0.31
DDX11-224ENST00000543026 CUTAO60888 179 aa17■□□□□ 0.31
DDX11-224ENST00000543026 PFKFB1P16118 471 aa17■□□□□ 0.31
DDX11-224ENST00000543026 R3HDM1Q15032 1099 aaKnown RBP17■□□□□ 0.31
DDX11-224ENST00000543026 EARS2Q5JPH6 523 aaKnown RBP17■□□□□ 0.31
DDX11-224ENST00000543026 SPZ1Q9BXG8 430 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms