RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 SPDYE3A6NKU9 549 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 DLL1O00548 723 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 DDX58O95786 925 aaKnown RBP10.24□□□□□ -0.77
CLPB-211ENST00000542555 KCNJ4P48050 445 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 TTLL5Q6EMB2 1281 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 CCDC191Q8NCU4 936 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 SLC17A8Q8NDX2 589 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 WNK4Q96J92 1243 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 DEFB129Q9H1M3 183 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 ETNK1Q9HBU6 452 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 AVENQ9NQS1 362 aaPredicted RBP10.24□□□□□ -0.77
CLPB-211ENST00000542555 PRR12Q9ULL5 1215 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 DOLKQ9UPQ8 538 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 MED23Q9ULK4 1368 aa10.24□□□□□ -0.77
CLPB-211ENST00000542555 COL1A1P02452 1464 aaPredicted RBP10.23□□□□□ -0.77
CLPB-211ENST00000542555 PCCAP05165 728 aaPredicted RBP10.23□□□□□ -0.77
CLPB-211ENST00000542555 CD33P20138 364 aa10.23□□□□□ -0.77
CLPB-211ENST00000542555 CRHR2Q13324 411 aa10.23□□□□□ -0.77
CLPB-211ENST00000542555 NEUROD2Q15784 382 aa10.23□□□□□ -0.77
CLPB-211ENST00000542555 DACT2Q5SW24 774 aa10.23□□□□□ -0.77
CLPB-211ENST00000542555 KIAA0825Q8IV33 1275 aa10.23□□□□□ -0.77
CLPB-211ENST00000542555 DPF3Q92784 378 aa10.23□□□□□ -0.77
CLPB-211ENST00000542555 MYD88Q99836 296 aa10.23□□□□□ -0.77
CLPB-211ENST00000542555 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
CLPB-211ENST00000542555 ZFYVE28Q9HCC9 887 aa10.23□□□□□ -0.77
CLPB-211ENST00000542555 CWC25Q9NXE8 425 aaPredicted RBP10.23□□□□□ -0.77
CLPB-211ENST00000542555 LEMD3Q9Y2U8 911 aa10.23□□□□□ -0.77
CLPB-211ENST00000542555 KHNYNO15037 678 aaKnown RBP10.22□□□□□ -0.77
CLPB-211ENST00000542555 MAPTP10636 758 aaKnown RBP10.22□□□□□ -0.77
CLPB-211ENST00000542555 IGHMBP2P38935 993 aaKnown RBP10.22□□□□□ -0.77
CLPB-211ENST00000542555 TMPOP42166 694 aaKnown RBP10.22□□□□□ -0.77
CLPB-211ENST00000542555 CCT4P50991 539 aaKnown RBP10.22□□□□□ -0.77
CLPB-211ENST00000542555 ANKRD13AQ8IZ07 590 aa10.22□□□□□ -0.77
CLPB-211ENST00000542555 ANKRD2Q9GZV1 360 aa10.22□□□□□ -0.77
CLPB-211ENST00000542555 DNAAF2Q9NVR5 837 aaKnown RBP10.22□□□□□ -0.77
CLPB-211ENST00000542555 KRTAP9-6A0A140TA67 174 aa10.21□□□□□ -0.77
CLPB-211ENST00000542555 H0YGN5 161 aa10.21□□□□□ -0.77
CLPB-211ENST00000542555 IGF2BP3O00425 579 aaKnown RBP eCLIP10.21□□□□□ -0.77
CLPB-211ENST00000542555 CHL1O00533 1208 aa10.21□□□□□ -0.77
CLPB-211ENST00000542555 RBM5P52756 815 aaKnown RBP eCLIP10.21□□□□□ -0.77
CLPB-211ENST00000542555 NEXNQ0ZGT2 675 aa10.21□□□□□ -0.77
CLPB-211ENST00000542555 TAF1CQ15572 869 aaPredicted RBP10.21□□□□□ -0.77
CLPB-211ENST00000542555 MAP3K11Q16584 847 aa10.21□□□□□ -0.77
CLPB-211ENST00000542555 PRRT3Q5FWE3 981 aa10.21□□□□□ -0.77
CLPB-211ENST00000542555 FCHSD1Q86WN1 690 aa10.21□□□□□ -0.77
CLPB-211ENST00000542555 ZNF333Q96JL9 665 aa10.21□□□□□ -0.77
CLPB-211ENST00000542555 HTATIP2Q9BUP3 242 aa10.21□□□□□ -0.77
CLPB-211ENST00000542555 MXD3Q9BW11 206 aa10.21□□□□□ -0.77
CLPB-211ENST00000542555 BSDC1Q9NW68 430 aaPredicted RBP10.21□□□□□ -0.77
CLPB-211ENST00000542555 STAU1O95793 577 aaKnown RBP10.2□□□□□ -0.78
CLPB-211ENST00000542555 ALAS2P22557 587 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 PCBP4P57723 403 aaKnown RBP10.2□□□□□ -0.78
CLPB-211ENST00000542555 GTF2IP78347 998 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 TNP2Q05952 138 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 TNFAIP1Q13829 316 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 SCN9AQ15858 1988 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 SLFNL1Q499Z3 407 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 DUSP27Q5VZP5 1158 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 BANK1Q8NDB2 785 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 TRIM11Q96F44 468 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 MPHOSPH8Q99549 860 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 VEZTQ9HBM0 779 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 MINPP1Q9UNW1 487 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 NR2E3Q9Y5X4 410 aa10.2□□□□□ -0.78
CLPB-211ENST00000542555 ZNF804BA4D1E1 1349 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 A0A1W2PNR3 127 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 ATP4AP20648 1035 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 HOXD10P28358 340 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 GTF2A2P52657 109 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 PRMT2P55345 433 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 CTSWP56202 376 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 KRT24Q2M2I5 525 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 OXLD1Q5BKU9 147 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 CLMNQ96JQ2 1002 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 KLF15Q9UIH9 416 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 CSADQ9Y600 493 aa10.19□□□□□ -0.78
CLPB-211ENST00000542555 CALD1Q05682 793 aaKnown RBP10.18□□□□□ -0.78
CLPB-211ENST00000542555 WDR43Q15061 677 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLPB-211ENST00000542555 JARID2Q92833 1246 aaPredicted RBP10.18□□□□□ -0.78
CLPB-211ENST00000542555 OPTNQ96CV9 577 aa10.18□□□□□ -0.78
CLPB-211ENST00000542555 FZD1Q9UP38 647 aa10.18□□□□□ -0.78
CLPB-211ENST00000542555 PTCH2Q9Y6C5 1203 aa10.18□□□□□ -0.78
CLPB-211ENST00000542555 PSME4Q14997 1843 aa10.18□□□□□ -0.78
CLPB-211ENST00000542555 RBBP6Q7Z6E9 1792 aaKnown RBP10.18□□□□□ -0.78
CLPB-211ENST00000542555 CCL15-CCL14A0A0B4J2E2 113 aa10.17□□□□□ -0.78
CLPB-211ENST00000542555 CLRN2A0PK11 232 aa10.17□□□□□ -0.78
CLPB-211ENST00000542555 F8W031 263 aaPredicted RBP10.17□□□□□ -0.78
CLPB-211ENST00000542555 TNNI2P48788 182 aa10.17□□□□□ -0.78
CLPB-211ENST00000542555 CCL15Q16663 113 aa10.17□□□□□ -0.78
CLPB-211ENST00000542555 RSPO4Q2I0M5 234 aaPredicted RBP10.17□□□□□ -0.78
CLPB-211ENST00000542555 CFAP100Q494V2 611 aa10.17□□□□□ -0.78
CLPB-211ENST00000542555 ZNF468Q5VIY5 522 aaPredicted RBP10.17□□□□□ -0.78
CLPB-211ENST00000542555 ZNF804AQ7Z570 1209 aa10.17□□□□□ -0.78
CLPB-211ENST00000542555 MTMR14Q8NCE2 650 aa10.17□□□□□ -0.78
CLPB-211ENST00000542555 METTL22Q9BUU2 404 aaPredicted RBP10.17□□□□□ -0.78
CLPB-211ENST00000542555 ELP3Q9H9T3 547 aa10.17□□□□□ -0.78
CLPB-211ENST00000542555 BIN2Q9UBW5 565 aaPredicted RBP10.17□□□□□ -0.78
CLPB-211ENST00000542555 USP2O75604 605 aaPredicted RBP10.16□□□□□ -0.78
CLPB-211ENST00000542555 INHAP05111 366 aa10.16□□□□□ -0.78
CLPB-211ENST00000542555 TSGA10IPQ3SY00 556 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms