RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 ATP2B2Q01814 1243 aa19.64■□□□□ 0.73
CCND1-205ENST00000542367 COG2Q14746 738 aa19.64■□□□□ 0.73
CCND1-205ENST00000542367 ZMYM1Q5SVZ6 1142 aa19.64■□□□□ 0.73
CCND1-205ENST00000542367 GPR142Q7Z601 462 aa19.64■□□□□ 0.73
CCND1-205ENST00000542367 U2AF1L4Q8WU68 220 aaKnown RBP19.64■□□□□ 0.73
CCND1-205ENST00000542367 RWDD1Q9H446 243 aaPredicted RBP19.64■□□□□ 0.73
CCND1-205ENST00000542367 SH2D4AQ9H788 454 aa19.64■□□□□ 0.73
CCND1-205ENST00000542367 KANSL2Q9H9L4 492 aa19.64■□□□□ 0.73
CCND1-205ENST00000542367 MKNK2Q9HBH9 465 aa19.64■□□□□ 0.73
CCND1-205ENST00000542367 HOXC10Q9NYD6 342 aa19.64■□□□□ 0.73
CCND1-205ENST00000542367 BTBD7Q9P203 1132 aa19.64■□□□□ 0.73
CCND1-205ENST00000542367 PLXNB2O15031 1838 aa19.64■□□□□ 0.73
CCND1-205ENST00000542367 SGPL1O95470 568 aa19.63■□□□□ 0.73
CCND1-205ENST00000542367 EEF2P13639 858 aaKnown RBP19.63■□□□□ 0.73
CCND1-205ENST00000542367 CCNA1P78396 465 aa19.63■□□□□ 0.73
CCND1-205ENST00000542367 PLEKHH3Q7Z736 793 aa19.63■□□□□ 0.73
CCND1-205ENST00000542367 IFNL3Q8IZI9 196 aa19.63■□□□□ 0.73
CCND1-205ENST00000542367 SPICE1Q8N0Z3 855 aa19.63■□□□□ 0.73
CCND1-205ENST00000542367 SOCS4Q8WXH5 440 aa19.63■□□□□ 0.73
CCND1-205ENST00000542367 LPAR1Q92633 364 aa19.63■□□□□ 0.73
CCND1-205ENST00000542367 TANGO6Q9C0B7 1094 aa19.63■□□□□ 0.73
CCND1-205ENST00000542367 LNPKQ9C0E8 428 aa19.63■□□□□ 0.73
CCND1-205ENST00000542367 VCPKMTQ9H867 229 aa19.63■□□□□ 0.73
CCND1-205ENST00000542367 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
CCND1-205ENST00000542367 HMGCRP04035 888 aa19.62■□□□□ 0.73
CCND1-205ENST00000542367 RASA1P20936 1047 aa19.62■□□□□ 0.73
CCND1-205ENST00000542367 B4GALNT3Q6L9W6 998 aa19.62■□□□□ 0.73
CCND1-205ENST00000542367 EVI5LQ96CN4 794 aa19.62■□□□□ 0.73
CCND1-205ENST00000542367 DEFB118Q96PH6 123 aa19.62■□□□□ 0.73
CCND1-205ENST00000542367 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.62■□□□□ 0.73
CCND1-205ENST00000542367 IGHDP01880 384 aa19.61■□□□□ 0.73
CCND1-205ENST00000542367 XRCC5P13010 732 aaKnown RBP19.61■□□□□ 0.73
CCND1-205ENST00000542367 TRIM32Q13049 653 aa19.61■□□□□ 0.73
CCND1-205ENST00000542367 MORN1Q5T089 497 aa19.61■□□□□ 0.73
CCND1-205ENST00000542367 WDR78Q5VTH9 848 aa19.61■□□□□ 0.73
CCND1-205ENST00000542367 SMC5Q8IY18 1101 aa19.61■□□□□ 0.73
CCND1-205ENST00000542367 TRIB2Q92519 343 aa19.61■□□□□ 0.73
CCND1-205ENST00000542367 USP6NLQ92738 828 aa19.61■□□□□ 0.73
CCND1-205ENST00000542367 NACAP1Q9BZK3 213 aa19.61■□□□□ 0.73
CCND1-205ENST00000542367 PAK6Q9NQU5 681 aaPredicted RBP19.61■□□□□ 0.73
CCND1-205ENST00000542367 SUPT16HQ9Y5B9 1047 aaKnown RBP19.61■□□□□ 0.73
CCND1-205ENST00000542367 ROBO3Q96MS0 1386 aa19.6■□□□□ 0.73
CCND1-205ENST00000542367 TFRCP02786 760 aaKnown RBP19.6■□□□□ 0.73
CCND1-205ENST00000542367 RPTORQ8N122 1335 aa19.59■□□□□ 0.73
CCND1-205ENST00000542367 WDR46O15213 610 aaKnown RBP19.59■□□□□ 0.73
CCND1-205ENST00000542367 FLOT1O75955 427 aa19.59■□□□□ 0.73
CCND1-205ENST00000542367 DSG3P32926 999 aa19.59■□□□□ 0.73
CCND1-205ENST00000542367 RGS2P41220 211 aa19.59■□□□□ 0.73
CCND1-205ENST00000542367 CCDC129Q6ZRS4 1044 aa19.59■□□□□ 0.73
CCND1-205ENST00000542367 ZNF444Q8N0Y2 327 aaPredicted RBP19.59■□□□□ 0.73
CCND1-205ENST00000542367 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.59■□□□□ 0.73
CCND1-205ENST00000542367 NAPBQ9H115 298 aa19.59■□□□□ 0.73
CCND1-205ENST00000542367 ZNF287Q9HBT7 754 aa19.59■□□□□ 0.73
CCND1-205ENST00000542367 GOPCQ9HD26 462 aa19.59■□□□□ 0.73
CCND1-205ENST00000542367 HMX1Q9NP08 348 aaPredicted RBP19.59■□□□□ 0.73
CCND1-205ENST00000542367 RAD21O60216 631 aa19.58■□□□□ 0.72
CCND1-205ENST00000542367 PRDM1O75626 825 aa19.58■□□□□ 0.72
CCND1-205ENST00000542367 PTPREP23469 700 aa19.58■□□□□ 0.72
CCND1-205ENST00000542367 MAP2K5Q13163 448 aa19.58■□□□□ 0.72
CCND1-205ENST00000542367 SAMD1Q6SPF0 538 aaPredicted RBP19.58■□□□□ 0.72
CCND1-205ENST00000542367 UBE2Q1Q7Z7E8 422 aa19.58■□□□□ 0.72
CCND1-205ENST00000542367 TRMT44Q8IYL2 757 aaKnown RBP19.58■□□□□ 0.72
CCND1-205ENST00000542367 RLFQ13129 1914 aa19.58■□□□□ 0.72
CCND1-205ENST00000542367 ZKSCAN1P17029 563 aaPredicted RBP19.57■□□□□ 0.72
CCND1-205ENST00000542367 CAPN2P17655 700 aa19.57■□□□□ 0.72
CCND1-205ENST00000542367 CCL14Q16627 93 aa19.57■□□□□ 0.72
CCND1-205ENST00000542367 CHD1LQ86WJ1 897 aa19.57■□□□□ 0.72
CCND1-205ENST00000542367 MB21D1Q8N884 522 aa19.57■□□□□ 0.72
CCND1-205ENST00000542367 ATG4CQ96DT6 458 aa19.57■□□□□ 0.72
CCND1-205ENST00000542367 MOV10L1Q9BXT6 1211 aaKnown RBP19.57■□□□□ 0.72
CCND1-205ENST00000542367 SPATC1LQ9H0A9 340 aa19.57■□□□□ 0.72
CCND1-205ENST00000542367 CRISPLD2Q9H0B8 497 aa19.57■□□□□ 0.72
CCND1-205ENST00000542367 NYAP2Q9P242 653 aa19.57■□□□□ 0.72
CCND1-205ENST00000542367 IVNS1ABPQ9Y6Y0 642 aa19.57■□□□□ 0.72
CCND1-205ENST00000542367 SLC15A5A6NIM6 579 aa19.56■□□□□ 0.72
CCND1-205ENST00000542367 FARP2O94887 1054 aaPredicted RBP19.56■□□□□ 0.72
CCND1-205ENST00000542367 PRKAR2AP13861 404 aaKnown RBP19.56■□□□□ 0.72
CCND1-205ENST00000542367 NUCB1Q02818 461 aa19.56■□□□□ 0.72
CCND1-205ENST00000542367 PPARAQ07869 468 aa19.56■□□□□ 0.72
CCND1-205ENST00000542367 MAP3K21Q5TCX8 1036 aa19.56■□□□□ 0.72
CCND1-205ENST00000542367 APBA2Q99767 749 aa19.56■□□□□ 0.72
CCND1-205ENST00000542367 HELLSQ9NRZ9 838 aa19.56■□□□□ 0.72
CCND1-205ENST00000542367 CLIP2Q9UDT6 1046 aa19.56■□□□□ 0.72
CCND1-205ENST00000542367 GREB1LQ9C091 1923 aaPredicted RBP19.56■□□□□ 0.72
CCND1-205ENST00000542367 TRIM6-TRIM34B2RNG4 842 aa19.55■□□□□ 0.72
CCND1-205ENST00000542367 FOXP2O15409 715 aa19.55■□□□□ 0.72
CCND1-205ENST00000542367 SLC3A2P08195 630 aaKnown RBP19.55■□□□□ 0.72
CCND1-205ENST00000542367 PDE4BQ07343 736 aa19.55■□□□□ 0.72
CCND1-205ENST00000542367 CACNB2Q08289 660 aaPredicted RBP19.55■□□□□ 0.72
CCND1-205ENST00000542367 PLS1Q14651 629 aa19.55■□□□□ 0.72
CCND1-205ENST00000542367 FAM83BQ5T0W9 1011 aa19.55■□□□□ 0.72
CCND1-205ENST00000542367 VPS53Q5VIR6 699 aa19.55■□□□□ 0.72
CCND1-205ENST00000542367 FBXO28Q9NVF7 368 aa19.55■□□□□ 0.72
CCND1-205ENST00000542367 IGKV6D-41A0A0C4DH26 115 aa19.54■□□□□ 0.72
CCND1-205ENST00000542367 ERCC3P19447 782 aa19.54■□□□□ 0.72
CCND1-205ENST00000542367 GRB14Q14449 540 aa19.54■□□□□ 0.72
CCND1-205ENST00000542367 PLEKHM2Q8IWE5 1019 aa19.54■□□□□ 0.72
CCND1-205ENST00000542367 SHCBP1Q8NEM2 672 aa19.54■□□□□ 0.72
CCND1-205ENST00000542367 DPF3Q92784 378 aa19.54■□□□□ 0.72
CCND1-205ENST00000542367 RILPL2Q969X0 211 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms