RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 SHTN1A0MZ66 631 aa12.75□□□□□ -0.37
SCG3-202ENST00000542355 TOP1P11387 765 aaKnown RBP12.75□□□□□ -0.37
SCG3-202ENST00000542355 GNL2Q13823 731 aaKnown RBP12.75□□□□□ -0.37
SCG3-202ENST00000542355 PKN1Q16512 942 aa12.75□□□□□ -0.37
SCG3-202ENST00000542355 LEO1Q8WVC0 666 aaPredicted RBP12.75□□□□□ -0.37
SCG3-202ENST00000542355 PIBF1Q8WXW3 757 aa12.75□□□□□ -0.37
SCG3-202ENST00000542355 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
SCG3-202ENST00000542355 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
SCG3-202ENST00000542355 VEZTQ9HBM0 779 aa12.75□□□□□ -0.37
SCG3-202ENST00000542355 RBM27Q9P2N5 1060 aaKnown RBP12.75□□□□□ -0.37
SCG3-202ENST00000542355 MAD2L2Q9UI95 211 aa12.75□□□□□ -0.37
SCG3-202ENST00000542355 NOVP48745 357 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 GRM4Q14833 912 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 CERKLQ49MI3 558 aaPredicted RBP12.74□□□□□ -0.37
SCG3-202ENST00000542355 BRAPQ7Z569 592 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 CLEC10AQ8IUN9 316 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 ZNF396Q96N95 335 aaPredicted RBP12.74□□□□□ -0.37
SCG3-202ENST00000542355 USP28Q96RU2 1077 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 CSRNP1Q96S65 589 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 CLIP2Q9UDT6 1046 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 GJA3Q9Y6H8 435 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 MYH1P12882 1939 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 IGKV6D-41A0A0C4DH26 115 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 WNT10BO00744 389 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 MYO1BO43795 1136 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 MMP1P03956 469 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 GOLGA8HP0CJ92 632 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 NBPF9Q3BBW0 867 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 SPDYE2Q495Y8 402 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 RBM26Q5T8P6 1007 aaKnown RBP12.74□□□□□ -0.37
SCG3-202ENST00000542355 ARHGAP27Q6ZUM4 889 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 MTMR14Q8NCE2 650 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 CCDC17Q96LX7 622 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 MYOZ2Q9NPC6 264 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 VPS54Q9P1Q0 977 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 CNTNAP5Q8WYK1 1306 aa12.74□□□□□ -0.37
SCG3-202ENST00000542355 FZD9O00144 591 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 TTLL1O95922 423 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 XBP1P17861 261 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 GNAQP50148 359 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 SAFBQ15424 915 aaKnown RBP eCLIP12.73□□□□□ -0.37
SCG3-202ENST00000542355 MYSM1Q5VVJ2 828 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 TATDN1Q6P1N9 297 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 RASGRP2Q7LDG7 609 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 FAM151AQ8WW52 585 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 TMEM63CQ9P1W3 806 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 ELP1O95163 1332 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 PLIN4Q96Q06 1357 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 FOCADQ5VW36 1801 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 PALM3A6NDB9 673 aaPredicted RBP12.73□□□□□ -0.37
SCG3-202ENST00000542355 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 BTBD18B2RXH4 712 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 DEKP35659 375 aaKnown RBP12.73□□□□□ -0.37
SCG3-202ENST00000542355 ATP2B2Q01814 1243 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 SHROOM1Q2M3G4 852 aaPredicted RBP12.73□□□□□ -0.37
SCG3-202ENST00000542355 LRRC47Q8N1G4 583 aaKnown RBP12.73□□□□□ -0.37
SCG3-202ENST00000542355 ATRNL1Q5VV63 1379 aa12.73□□□□□ -0.37
SCG3-202ENST00000542355 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
SCG3-202ENST00000542355 PARP1P09874 1014 aaKnown RBP12.72□□□□□ -0.37
SCG3-202ENST00000542355 VEGFAP15692 232 aaPredicted RBP12.72□□□□□ -0.37
SCG3-202ENST00000542355 RPS12P25398 132 aaKnown RBP12.72□□□□□ -0.37
SCG3-202ENST00000542355 U2AF2P26368 475 aaKnown RBP eCLIP12.72□□□□□ -0.37
SCG3-202ENST00000542355 GMPSP49915 693 aaPredicted RBP12.72□□□□□ -0.37
SCG3-202ENST00000542355 METTL16Q86W50 562 aaKnown RBP12.72□□□□□ -0.37
SCG3-202ENST00000542355 DIS3L2Q8IYB7 885 aaKnown RBP12.72□□□□□ -0.37
SCG3-202ENST00000542355 SHISA4Q96DD7 197 aa12.72□□□□□ -0.37
SCG3-202ENST00000542355 RCOR1Q9UKL0 485 aa12.72□□□□□ -0.37
SCG3-202ENST00000542355 FER1L6Q2WGJ9 1857 aa12.72□□□□□ -0.37
SCG3-202ENST00000542355 USP17L5A8MUK1 530 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 KLRF2D3W0D1 207 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 RIOK3O14730 519 aaKnown RBP12.71□□□□□ -0.37
SCG3-202ENST00000542355 EGFRP00533 1210 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 ZNF280AP59817 542 aaPredicted RBP12.71□□□□□ -0.37
SCG3-202ENST00000542355 ZSCAN23Q3MJ62 389 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 ZBED3Q96IU2 234 aaPredicted RBP12.71□□□□□ -0.37
SCG3-202ENST00000542355 TMEM39BQ9GZU3 492 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 SCAF8Q9UPN6 1271 aaKnown RBP12.71□□□□□ -0.37
SCG3-202ENST00000542355 CLIC4Q9Y696 253 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 CYTH3O43739 400 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 GDF11O95390 407 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 PDHBP11177 359 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 SCG2P13521 617 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 PFKFB3Q16875 520 aaPredicted RBP12.71□□□□□ -0.37
SCG3-202ENST00000542355 SAMD7Q7Z3H4 446 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 MICALL2Q8IY33 904 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 PGBD1Q96JS3 809 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 CPVLQ9H3G5 476 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.71□□□□□ -0.37
SCG3-202ENST00000542355 RTEL1Q9NZ71 1219 aa12.71□□□□□ -0.37
SCG3-202ENST00000542355 CNOT7Q9UIV1 285 aaKnown RBP12.71□□□□□ -0.37
SCG3-202ENST00000542355 CNTNAP1P78357 1384 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 NR5A1Q13285 461 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 ABCB5Q2M3G0 1257 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 SLC35G1Q2M3R5 365 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 FKBP1CQ5VVH2 108 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 NOSTRINQ8IVI9 506 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 CDAN1Q8IWY9 1227 aa12.7□□□□□ -0.38
SCG3-202ENST00000542355 OXER1Q8TDS5 423 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms