RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	ECM2	O94769	699 aa	Predicted RBP	14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	GH2	P01242	217 aa		14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	TTC38	Q5R3I4	469 aa		14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	RNF26	Q9BY78	433 aa	Predicted RBP	14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	SERPINA10	Q9UK55	444 aa		14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	FGFR1OP	O95684	399 aa	Known RBP	14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	ALAS1	P13196	640 aa		14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	PTPN14	Q15678	1187 aa		14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	ANO1	Q5XXA6	986 aa		14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	CPLX3	Q8WVH0	158 aa		14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	PODXL2	Q9NZ53	605 aa		14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	HERC5	Q9UII4	1024 aa	Known RBP	14.01	□□□□□ -0.17
ABCB8-222	ENST00000542328	ANO6	Q4KMQ2	910 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	RRAGB	Q5VZM2	374 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	GALNT17	Q6IS24	598 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	FAM173B	Q6P4H8	233 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	LRP10	Q7Z4F1	713 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	TBC1D10C	Q8IV04	446 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	SPICE1	Q8N0Z3	855 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	CAMKK2	Q96RR4	588 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	ENTPD3	O75355	529 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	GMPS	P49915	693 aa	Predicted RBP	14	□□□□□ -0.17
ABCB8-222	ENST00000542328	SLC10A4	Q96EP9	437 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	AMN	Q9BXJ7	453 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	SCRN1	Q12765	414 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	FAM200A	Q8TCP9	573 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	AKT1S1	Q96B36	256 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	RMND1	Q9NWS8	449 aa		14	□□□□□ -0.17
ABCB8-222	ENST00000542328	KRT26	Q7Z3Y9	468 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	TMC6	Q7Z403	805 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	MCF2L2	Q86YR7	1114 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	BLID	Q8IZY5	108 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	PSTPIP2	Q9H939	334 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	AFM	P43652	599 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	C12orf60	Q5U649	245 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	C2orf69	Q8N8R5	385 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	TRMT1	Q9NXH9	659 aa	Known RBP	13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	MYCL	P12524	364 aa	Predicted RBP	13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	TXNRD3	Q86VQ6	643 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	MXD3	Q9BW11	206 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	DNAJC25	Q9H1X3	360 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	PCDHA1	Q9Y5I3	950 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	WDR19	Q8NEZ3	1342 aa		13.99	□□□□□ -0.17
ABCB8-222	ENST00000542328	TNNT3	P45378	269 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	KIAA1328	Q86T90	577 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	SLC44A5	Q8NCS7	719 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	VPS33B	Q9H267	617 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	GPR75-ASB3	A0A0A6YYF3	556 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	ORC4	O43929	436 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	CCNT1	O60563	726 aa	Known RBP	13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	IFNAR1	P17181	557 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	SBK1	Q52WX2	424 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	FKBP15	Q5T1M5	1219 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	FAM160B2	Q86V87	743 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	WRNIP1	Q96S55	665 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	HACL1	Q9UJ83	578 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	VWA3A	A6NCI4	1184 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	BACH1	O14867	736 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	CDC42EP5	Q6NZY7	148 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	IQUB	Q8NA54	791 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	DHX58	Q96C10	678 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	EXOC1	Q9NV70	894 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	SLC5A4	Q9NY91	659 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	CCPG1	Q9ULG6	757 aa		13.98	□□□□□ -0.17
ABCB8-222	ENST00000542328	OSBP	P22059	807 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	PPP4C	P60510	307 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	RASA3	Q14644	834 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	ZNF397	Q8NF99	534 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	ZNF70	Q9UC06	446 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	POLR2M	P0CAP2	368 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	MMP14	P50281	582 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	KCTD1	Q719H9	257 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	CDC37L1	Q7L3B6	337 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	SEPT11	Q9NVA2	429 aa	Known RBP	13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	FAM196B	A6NMK8	535 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	HSP90AA4P	Q58FG1	418 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	CCDC181	Q5TID7	509 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	TXLNB	Q8N3L3	684 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	ERCC4	Q92889	916 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	FLT1	P17948	1338 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	NEDD4	P46934	1319 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	ZSCAN12	O43309	604 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	FOS	P01100	380 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	IL1R1	P14778	569 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	CCNA1	P78396	465 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	TYRO3	Q06418	890 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	USP17L2	Q6R6M4	530 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	NEDD1	Q8NHV4	660 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	FAM151A	Q8WW52	585 aa		13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	C16orf45	Q96MC5	204 aa	Predicted RBP	13.97	□□□□□ -0.17
ABCB8-222	ENST00000542328	NHSL1	Q5SYE7	1610 aa		13.96	□□□□□ -0.17
ABCB8-222	ENST00000542328	USP17L5	A8MUK1	530 aa		13.96	□□□□□ -0.17
ABCB8-222	ENST00000542328	hCG_1984214	I3L0E3	225 aa		13.96	□□□□□ -0.17
ABCB8-222	ENST00000542328	PLCD1	P51178	756 aa		13.96	□□□□□ -0.17
ABCB8-222	ENST00000542328	STAT2	P52630	851 aa		13.96	□□□□□ -0.17
ABCB8-222	ENST00000542328	SEPT2	Q15019	361 aa		13.96	□□□□□ -0.17
ABCB8-222	ENST00000542328	ZNF713	Q8N859	430 aa	Predicted RBP	13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms