RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 ZNF236Q9UL36 1845 aa18.67■□□□□ 0.58
RTN3-211ENST00000542238 ADORA2AP29274 412 aa18.67■□□□□ 0.58
RTN3-211ENST00000542238 HNRNPUQ00839 825 aaKnown RBP eCLIP18.67■□□□□ 0.58
RTN3-211ENST00000542238 OLFML2BQ68BL8 750 aa18.67■□□□□ 0.58
RTN3-211ENST00000542238 TMEM179Q6ZVK1 233 aa18.67■□□□□ 0.58
RTN3-211ENST00000542238 CLASRPQ8N2M8 674 aaKnown RBP18.67■□□□□ 0.58
RTN3-211ENST00000542238 MB21D1Q8N884 522 aa18.67■□□□□ 0.58
RTN3-211ENST00000542238 SHCBP1Q8NEM2 672 aa18.67■□□□□ 0.58
RTN3-211ENST00000542238 RHPN1Q8TCX5 695 aa18.67■□□□□ 0.58
RTN3-211ENST00000542238 SPATC1LQ9H0A9 340 aa18.67■□□□□ 0.58
RTN3-211ENST00000542238 SWAP70Q9UH65 585 aa18.67■□□□□ 0.58
RTN3-211ENST00000542238 ZNF532Q9HCE3 1301 aa18.67■□□□□ 0.58
RTN3-211ENST00000542238 A0A1W2PRG0 241 aa18.66■□□□□ 0.58
RTN3-211ENST00000542238 CYBAP13498 195 aa18.66■□□□□ 0.58
RTN3-211ENST00000542238 TRPV1Q8NER1 839 aa18.66■□□□□ 0.58
RTN3-211ENST00000542238 DNAJC2Q99543 621 aaKnown RBP18.66■□□□□ 0.58
RTN3-211ENST00000542238 ARHGEF10LQ9HCE6 1279 aa18.66■□□□□ 0.58
RTN3-211ENST00000542238 DNAH12Q6ZR08 3092 aa18.66■□□□□ 0.58
RTN3-211ENST00000542238 RLFQ13129 1914 aa18.65■□□□□ 0.58
RTN3-211ENST00000542238 A0A0C4DFX4 3053 aa18.65■□□□□ 0.58
RTN3-211ENST00000542238 KBTBD13C9JR72 458 aa18.65■□□□□ 0.58
RTN3-211ENST00000542238 GOLIM4O00461 696 aa18.65■□□□□ 0.58
RTN3-211ENST00000542238 IFIT2P09913 472 aaKnown RBP18.65■□□□□ 0.58
RTN3-211ENST00000542238 ERCC3P19447 782 aa18.65■□□□□ 0.58
RTN3-211ENST00000542238 PLS1Q14651 629 aa18.65■□□□□ 0.58
RTN3-211ENST00000542238 GJC2Q5T442 439 aaPredicted RBP18.65■□□□□ 0.58
RTN3-211ENST00000542238 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.65■□□□□ 0.58
RTN3-211ENST00000542238 SDR42E1Q8WUS8 393 aa18.65■□□□□ 0.58
RTN3-211ENST00000542238 MROH8Q9H579 483 aa18.65■□□□□ 0.58
RTN3-211ENST00000542238 SH2D4AQ9H788 454 aa18.65■□□□□ 0.58
RTN3-211ENST00000542238 DCP1AQ9NPI6 582 aaPredicted RBP18.65■□□□□ 0.58
RTN3-211ENST00000542238 A0A0G2JMZ2 1700 aa18.65■□□□□ 0.58
RTN3-211ENST00000542238 ZNFX1Q9P2E3 1918 aaKnown RBP18.64■□□□□ 0.58
RTN3-211ENST00000542238 APBB1O00213 710 aa18.64■□□□□ 0.57
RTN3-211ENST00000542238 IGHA2P01877 340 aa18.64■□□□□ 0.57
RTN3-211ENST00000542238 RTP1P59025 263 aa18.64■□□□□ 0.57
RTN3-211ENST00000542238 LCORLQ8N3X6 602 aa18.64■□□□□ 0.57
RTN3-211ENST00000542238 KIF1BPQ96EK5 621 aa18.64■□□□□ 0.57
RTN3-211ENST00000542238 ATP11BQ9Y2G3 1177 aa18.64■□□□□ 0.57
RTN3-211ENST00000542238 BAZ2AQ9UIF9 1905 aaKnown RBP18.63■□□□□ 0.57
RTN3-211ENST00000542238 SEPT4O43236 478 aa18.63■□□□□ 0.57
RTN3-211ENST00000542238 FLOT1O75955 427 aa18.63■□□□□ 0.57
RTN3-211ENST00000542238 MYCNP04198 464 aaPredicted RBP18.63■□□□□ 0.57
RTN3-211ENST00000542238 MS4A1P11836 297 aa18.63■□□□□ 0.57
RTN3-211ENST00000542238 DSG3P32926 999 aa18.63■□□□□ 0.57
RTN3-211ENST00000542238 EVX2Q03828 476 aa18.63■□□□□ 0.57
RTN3-211ENST00000542238 FAM109BQ6ICB4 259 aaPredicted RBP18.63■□□□□ 0.57
RTN3-211ENST00000542238 NCAPG2Q86XI2 1143 aa18.63■□□□□ 0.57
RTN3-211ENST00000542238 AMOTL1Q8IY63 956 aa18.63■□□□□ 0.57
RTN3-211ENST00000542238 ABRAQ8N0Z2 381 aa18.63■□□□□ 0.57
RTN3-211ENST00000542238 PANK1Q8TE04 598 aa18.63■□□□□ 0.57
RTN3-211ENST00000542238 BCL11AQ9H165 835 aa18.63■□□□□ 0.57
RTN3-211ENST00000542238 TCRBV5S4A2TA0A5A2 114 aa18.62■□□□□ 0.57
RTN3-211ENST00000542238 HMMRO75330 724 aa18.62■□□□□ 0.57
RTN3-211ENST00000542238 CYP2D6P10635 497 aa18.62■□□□□ 0.57
RTN3-211ENST00000542238 ICA1Q05084 483 aa18.62■□□□□ 0.57
RTN3-211ENST00000542238 SLC39A5Q6ZMH5 540 aa18.62■□□□□ 0.57
RTN3-211ENST00000542238 SLC44A5Q8NCS7 719 aa18.62■□□□□ 0.57
RTN3-211ENST00000542238 ARMT1Q9H993 441 aa18.62■□□□□ 0.57
RTN3-211ENST00000542238 ATP8A2Q9NTI2 1148 aa18.62■□□□□ 0.57
RTN3-211ENST00000542238 TMX2Q9Y320 296 aa18.62■□□□□ 0.57
RTN3-211ENST00000542238 LTBP2Q14767 1821 aa18.62■□□□□ 0.57
RTN3-211ENST00000542238 PARP14Q460N5 1801 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 POTEB2H3BUK9 544 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 COBLO75128 1261 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 FCER1AP12319 257 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 KIAA1755Q5JYT7 1200 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 ANO1Q5XXA6 986 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
RTN3-211ENST00000542238 RPAP2Q8IXW5 612 aaPredicted RBP18.61■□□□□ 0.57
RTN3-211ENST00000542238 SPICE1Q8N0Z3 855 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 ATG4CQ96DT6 458 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 DYNLL2Q96FJ2 89 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 DDRGK1Q96HY6 314 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 CCDC17Q96LX7 622 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.61■□□□□ 0.57
RTN3-211ENST00000542238 VCPKMTQ9H867 229 aa18.61■□□□□ 0.57
RTN3-211ENST00000542238 WDR46O15213 610 aaKnown RBP18.6■□□□□ 0.57
RTN3-211ENST00000542238 SLC25A27O95847 323 aa18.6■□□□□ 0.57
RTN3-211ENST00000542238 AKR1B1P15121 316 aa18.6■□□□□ 0.57
RTN3-211ENST00000542238 PRDM5Q9NQX1 630 aaPredicted RBP18.6■□□□□ 0.57
RTN3-211ENST00000542238 PAG1Q9NWQ8 432 aa18.6■□□□□ 0.57
RTN3-211ENST00000542238 COL11A1P12107 1806 aaPredicted RBP18.6■□□□□ 0.57
RTN3-211ENST00000542238 MYH7P12883 1935 aa18.59■□□□□ 0.57
RTN3-211ENST00000542238 RAB11FIP3O75154 756 aa18.59■□□□□ 0.57
RTN3-211ENST00000542238 MBD4O95243 580 aa18.59■□□□□ 0.57
RTN3-211ENST00000542238 PRAMEF19Q5SWL8 479 aa18.59■□□□□ 0.57
RTN3-211ENST00000542238 ZNF697Q5TEC3 545 aa18.59■□□□□ 0.57
RTN3-211ENST00000542238 CLEC10AQ8IUN9 316 aa18.59■□□□□ 0.57
RTN3-211ENST00000542238 MAML3Q96JK9 1138 aa18.59■□□□□ 0.57
RTN3-211ENST00000542238 SMCHD1A6NHR9 2005 aa18.59■□□□□ 0.57
RTN3-211ENST00000542238 PRKAB2O43741 272 aa18.58■□□□□ 0.56
RTN3-211ENST00000542238 ADD2P35612 726 aa18.58■□□□□ 0.56
RTN3-211ENST00000542238 ADCYAP1R1P41586 468 aa18.58■□□□□ 0.56
RTN3-211ENST00000542238 CDK8P49336 464 aa18.58■□□□□ 0.56
RTN3-211ENST00000542238 LRRC41Q15345 812 aa18.58■□□□□ 0.56
RTN3-211ENST00000542238 SIAH1Q8IUQ4 282 aa18.58■□□□□ 0.56
RTN3-211ENST00000542238 FAM161BQ96MY7 647 aa18.58■□□□□ 0.56
RTN3-211ENST00000542238 BOLA2Q9H3K6 86 aa18.58■□□□□ 0.56
RTN3-211ENST00000542238 PLXNA1Q9UIW2 1896 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms