RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 GPATCH8Q9UKJ3 1502 aaKnown RBP4.96□□□□□ -1.62
SNHG1-219ENST00000542112 RPGRIP1LQ68CZ1 1315 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 KDM6BO15054 1643 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 BICDL2A1A5D9 508 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 SLC35F4A4IF30 521 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 A6NHS1 94 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-219ENST00000542112 F8VZ95 297 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 GIPC1O14908 333 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 PHACTR2O75167 634 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 XYLBO75191 536 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 TPPPO94811 219 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 CAVIN2O95810 425 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 CYP2E1P05181 493 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-219ENST00000542112 PAX3P23760 479 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 HNRNPH1P31943 449 aaKnown RBP4.95□□□□□ -1.62
SNHG1-219ENST00000542112 GJA8P48165 433 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 PTSQ03393 145 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 KRT72Q14CN4 511 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 CCDC57Q2TAC2 916 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 KBTBD12Q3ZCT8 623 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 SOGA3Q5TF21 947 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 TTC19Q6DKK2 380 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-219ENST00000542112 ISM2Q6H9L7 571 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 FBXO38Q6PIJ6 1188 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 RIPOR1Q6ZS17 1223 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 PDILTQ8N807 584 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 CEP112Q8N8E3 955 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 FAM81AQ8TBF8 368 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 BICD1Q96G01 975 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 MAK16Q9BXY0 300 aaKnown RBP4.95□□□□□ -1.62
SNHG1-219ENST00000542112 ZCCHC2Q9C0B9 1178 aaKnown RBP4.95□□□□□ -1.62
SNHG1-219ENST00000542112 IRF2BPLQ9H1B7 796 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 RWDD1Q9H446 243 aaPredicted RBP4.95□□□□□ -1.62
SNHG1-219ENST00000542112 ZFYVE28Q9HCC9 887 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 QPCTLQ9NXS2 382 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 TMOD4Q9NZQ9 345 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 SWAP70Q9UH65 585 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 LCMT1Q9UIC8 334 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 ODF2LQ9ULJ1 636 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 KCNH4Q9UQ05 1017 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 SPG7Q9UQ90 795 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 USP20Q9Y2K6 914 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 PCDHGC4Q9Y5F7 938 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.95□□□□□ -1.62
SNHG1-219ENST00000542112 SPATA31E1Q6ZUB1 1445 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 SAMD9LQ8IVG5 1584 aa4.95□□□□□ -1.62
SNHG1-219ENST00000542112 SCAMP3O14828 347 aaKnown RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 NPHP1O15259 732 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 POLR3GO15318 223 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 ST8SIA5O15466 376 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 EFSO43281 561 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 CEP104O60308 925 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 CCDC159P0C7I6 412 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 EZRP15311 586 aaKnown RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 NAT1P18440 290 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 STIP1P31948 543 aaKnown RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 SLC8A1P32418 973 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 GCKP35557 465 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 KCNJ6P48051 423 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 GCLCP48506 637 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 RAB27AP51159 221 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 HDLBPQ00341 1268 aaKnown RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 PRPF4BQ13523 1007 aaKnown RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 KIAA0753Q2KHM9 967 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 CCDC158Q5M9N0 1113 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 ANKRD45Q5TZF3 282 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 TTC39BQ5VTQ0 682 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 CEP135Q66GS9 1140 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 NUGGCQ68CJ6 796 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 MYLK4Q86YV6 388 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 MIGA1Q8NAN2 632 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 PRPF38AQ8NAV1 312 aaKnown RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 NEK11Q8NG66 645 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 N4BP2L2Q92802 583 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 KCNB2Q92953 911 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 SMARCE1Q969G3 411 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 CCDC74AQ96AQ1 378 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 HOOK2Q96ED9 719 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 RSRC1Q96IZ7 334 aaKnown RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 ANKRD27Q96NW4 1050 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 NAP1L3Q99457 506 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 CFHR5Q9BXR6 569 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 RABEP2Q9H5N1 569 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 L2HGDHQ9H9P8 463 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 ABI2Q9NYB9 513 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 VTI1BQ9UEU0 232 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 FOXD3Q9UJU5 478 aaPredicted RBP4.94□□□□□ -1.62
SNHG1-219ENST00000542112 GMEB1Q9Y692 573 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 ARHGEF5Q12774 1597 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 RIMBP3CA6NJZ7 1639 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 RIMBP3BA6NNM3 1639 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 ABCA9Q8IUA7 1624 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 RIMBP3Q9UFD9 1639 aa4.94□□□□□ -1.62
SNHG1-219ENST00000542112 ENO4A6NNW6 628 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 TMEM232C9JQI7 657 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 ABLIM1O14639 778 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 PPFIA3O75145 1194 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 ADCY5O95622 1261 aa4.93□□□□□ -1.62
SNHG1-219ENST00000542112 IDO1P14902 403 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms