RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 SPON1Q9HCB6 807 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 FOCADQ5VW36 1801 aa9.13□□□□□ -0.95
AC005840.3-201ENST00000541888 PSMD14O00487 310 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 USP5P45974 858 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 CLK2P49760 499 aaKnown RBP9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 FGD1P98174 961 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 PPARAQ07869 468 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 SPTY2D1Q68D10 685 aaPredicted RBP9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 MYL10Q9BUA6 226 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 NCOA5Q9HCD5 579 aaKnown RBP9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 DCP1AQ9NPI6 582 aaPredicted RBP9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 MCM9Q9NXL9 1143 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 FAM205AQ6ZU69 1335 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 DDX60LQ5H9U9 1706 aaKnown RBP9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 ARFGEF1Q9Y6D6 1849 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 TTC24A2A3L6 582 aaPredicted RBP9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 PRC1O43663 620 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 NMT2O60551 498 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 EIF5BO60841 1220 aaKnown RBP9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 PLCD1P51178 756 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 CCT2P78371 535 aaKnown RBP9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 TCP10Q12799 353 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 NFIAQ12857 509 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 PODNQ7Z5L7 613 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 CCDC144CPQ8IYA2 1237 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 SNIP1Q8TAD8 396 aaKnown RBP9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 IL17RAQ96F46 866 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 UNC93B1Q9H1C4 597 aa9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 DDX4Q9NQI0 724 aaKnown RBP9.12□□□□□ -0.95
AC005840.3-201ENST00000541888 TIAM2Q8IVF5 1701 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 EPB41L2O43491 1005 aaKnown RBP9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 IARSP41252 1262 aaKnown RBP9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 RHBDL3P58872 404 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 FOXD4L6Q3SYB3 417 aaPredicted RBP9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 FAM47AQ5JRC9 791 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 FOXD4L3Q6VB84 417 aaPredicted RBP9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 ZFPM1Q8IX07 1006 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 MB21D2Q8IYB1 491 aaPredicted RBP9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 TEX11Q8IYF3 940 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 RTKN2Q8IZC4 609 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 CRNKL1Q9BZJ0 848 aaKnown RBP9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 TAOK3Q9H2K8 898 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 CTNNA3Q9UI47 895 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 CD2APQ9Y5K6 639 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 MYH8P13535 1937 aa9.11□□□□□ -0.95
AC005840.3-201ENST00000541888 EGFRP00533 1210 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 PSMA5P28066 241 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 CRKP46108 304 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 EXOSC10Q01780 885 aaKnown RBP9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 L1TD1Q5T7N2 865 aaKnown RBP9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 DHX32Q7L7V1 743 aaKnown RBP9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 RALYLQ86SE5 291 aaKnown RBP9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 TBC1D22AQ8WUA7 517 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 PKNOX2Q96KN3 472 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 PSMD1Q99460 953 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 NACAP1Q9BZK3 213 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 TM6SF1Q9BZW5 370 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 ZSWIM5Q9P217 1185 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 LIMCH1Q9UPQ0 1083 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 FLT1P17948 1338 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 SBF1O95248 1867 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 GPR75-ASB3A0A0A6YYF3 556 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 CLRN2A0PK11 232 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 JAK2O60674 1132 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 YBX3P16989 372 aaKnown RBP eCLIP9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 GNAT2P19087 354 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 SH3BP2P78314 561 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 CXCL9Q07325 125 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 KRT32Q14532 448 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 SHROOM1Q2M3G4 852 aaPredicted RBP9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 AKNAD1Q5T1N1 836 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 STRIP1Q5VSL9 837 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 APOBEC3HQ6NTF7 200 aaKnown RBP9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 CDC42EP5Q6NZY7 148 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 MFSD6Q6ZSS7 791 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 ARHGAP27Q6ZUM4 889 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 NIM1KQ8IY84 436 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 NCOA7Q8NI08 942 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 NOL10Q9BSC4 688 aaKnown RBP9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 TDRD3Q9H7E2 651 aaKnown RBP9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 USP40Q9NVE5 1235 aa9.1□□□□□ -0.95
AC005840.3-201ENST00000541888 BAZ2BQ9UIF8 2168 aaKnown RBP9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 RANBP6O60518 1105 aaKnown RBP9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 CTHP32929 405 aa9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 GSTO1P78417 241 aa9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 SKIV2LQ15477 1246 aaKnown RBP9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 RASGRP2Q7LDG7 609 aa9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 CLEC10AQ8IUN9 316 aa9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 SUPT20HQ8NEM7 779 aa9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 BAP1Q92560 729 aa9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 TSC1Q92574 1164 aa9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 TEKT1Q969V4 418 aa9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 DDX11Q96FC9 970 aa9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 SYT17Q9BSW7 474 aa9.09□□□□□ -0.95
AC005840.3-201ENST00000541888 MKRN1Q9UHC7 482 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms