RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 TTC30BQ8N4P2 665 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 RNF10Q8N5U6 811 aaKnown RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 SYT2Q8N9I0 419 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 SMARCC2Q8TAQ2 1214 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 BCAS4Q8TDM0 211 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 USP6NLQ92738 828 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 CNKSR1Q969H4 720 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 HVCN1Q96D96 273 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 RTFDC1Q9BY42 306 aaPredicted RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 YIPF3Q9GZM5 350 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 GOLPH3LQ9H4A5 285 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 BICC1Q9H694 974 aaKnown RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 FAM204AQ9H8W3 233 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 TBCCD1Q9NVR7 557 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 GALNT8Q9NY28 637 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 AATFQ9NY61 560 aaKnown RBP eCLIP5.79□□□□□ -1.481e-323■■■□□ 16.4
SNHG1-218ENST00000541615 STIM2Q9P246 746 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 TFIP11Q9UBB9 837 aaKnown RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 ACAD8Q9UKU7 415 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 CFAP45Q9UL16 551 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 TMCC3Q9ULS5 477 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 MAFFQ9ULX9 164 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 L1RE1Q9UN81 338 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 R3HDM2Q9Y2K5 976 aaKnown RBP5.79□□□□□ -1.48
SNHG1-218ENST00000541615 C15orf41Q9Y2V0 281 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 ANKRD30BQ9BXX2 1392 aa5.79□□□□□ -1.48
SNHG1-218ENST00000541615 ZNF521Q96K83 1311 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 LRRC9Q6ZRR7 1453 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 CFAP73A6NFT4 308 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 ARID3CA6NKF2 412 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 TTC34A8MYJ7 566 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 GOLGA8KD6RF30 607 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 E7ENQ6 273 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 H0YC42 278 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 H3BQF6 201 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 NDUFAB1O14561 156 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 SART1O43290 800 aaKnown RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 PLXNC1O60486 1568 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 VAMP4O75379 141 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 MAP4K4O95819 1239 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 CSB-PGBD3P0DP91 1061 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 CPA3P15088 417 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 CA8P35219 290 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 KRT9P35527 623 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 IRAK1P51617 712 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 TPD52P55327 224 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 MXRA7P84157 204 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 FAM160A1Q05DH4 1040 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 SULT2A1Q06520 285 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 PPIDQ08752 370 aaKnown RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 KIF5AQ12840 1032 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 BIRC3Q13489 604 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 STIM1Q13586 685 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 GNL2Q13823 731 aaKnown RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 NDUFA5Q16718 116 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 TRIM71Q2Q1W2 868 aaKnown RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 SLC44A4Q53GD3 710 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 TJAP1Q5JTD0 557 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 BEND6Q5SZJ8 279 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 PRPF40BQ6NWY9 871 aaKnown RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 CCDC174Q6PII3 467 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 FOXR1Q6PIV2 292 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 SAMD7Q7Z3H4 446 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 SRGAP1Q7Z6B7 1085 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 C11orf74Q86VG3 221 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 HOOK3Q86VS8 718 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 HOMER1Q86YM7 354 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 CCDC13Q8IYE1 715 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 GDAP1Q8TB36 358 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 KLHDC4Q8TBB5 520 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 CACTINQ8WUQ7 758 aaKnown RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 RUBCNQ92622 972 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 NEK1Q96PY6 1258 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 NR1H4Q96RI1 486 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 CDC5LQ99459 802 aaKnown RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 DUSP9Q99956 384 aaKnown RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 NACAP1Q9BZK3 213 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 INO80BQ9C086 356 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 OSBPL5Q9H0X9 879 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 TNMDQ9H2S6 317 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 ZNF304Q9HCX3 659 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 SLC40A1Q9NP59 571 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 DDX21Q9NR30 783 aaKnown RBP eCLIP5.78□□□□□ -1.481e-323■■■□□ 15.6
SNHG1-218ENST00000541615 KRT82Q9NSB4 513 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 FAM198AQ9UFP1 575 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 NRBP1Q9UHY1 535 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 DSEQ9UL01 958 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 PRDM15P57071 1507 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-218ENST00000541615 ABCA10Q8WWZ4 1543 aa5.78□□□□□ -1.48
SNHG1-218ENST00000541615 SHROOM2Q13796 1616 aa5.77□□□□□ -1.48
SNHG1-218ENST00000541615 NAIPQ13075 1403 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 NPATQ14207 1427 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 GPR75-ASB3A0A0A6YYF3 556 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 WNT7AO00755 349 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 ACTN4O43707 911 aaKnown RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 IDH3BO43837 385 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 USO1O60763 962 aaKnown RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 GIGYF1O75420 1035 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-218ENST00000541615 MTA2O94776 668 aa5.77□□□□□ -1.49
SNHG1-218ENST00000541615 RAPGEF3O95398 923 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms