RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 CPA4Q9UI42 421 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 CYP46A1Q9Y6A2 500 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 CHGBP05060 677 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 CYP2E1P05181 493 aaPredicted RBP9.66□□□□□ -0.86
LMO3-226ENST00000541589 PPIL2Q13356 520 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 UBE4AQ14139 1066 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 RAB3GAP1Q15042 981 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 ADCK5Q3MIX3 580 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 PI16Q6UXB8 463 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 RUFY3Q7L099 469 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.66□□□□□ -0.86
LMO3-226ENST00000541589 INTS4Q96HW7 963 aaKnown RBP9.66□□□□□ -0.86
LMO3-226ENST00000541589 SERPINA10Q9UK55 444 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 A0A1B0GUL6 1792 aa9.66□□□□□ -0.86
LMO3-226ENST00000541589 M0R2C6 588 aa9.65□□□□□ -0.87
LMO3-226ENST00000541589 FRAT2O75474 233 aaPredicted RBP9.65□□□□□ -0.87
LMO3-226ENST00000541589 FMNL1O95466 1100 aaPredicted RBP9.65□□□□□ -0.87
LMO3-226ENST00000541589 ADD2P35612 726 aa9.65□□□□□ -0.87
LMO3-226ENST00000541589 MLLT3P42568 568 aaPredicted RBP9.65□□□□□ -0.87
LMO3-226ENST00000541589 BCAMP50895 628 aa9.65□□□□□ -0.87
LMO3-226ENST00000541589 RBM5P52756 815 aaKnown RBP eCLIP9.65□□□□□ -0.87
LMO3-226ENST00000541589 AK2P54819 239 aa9.65□□□□□ -0.87
LMO3-226ENST00000541589 NUCB2P80303 420 aa9.65□□□□□ -0.87
LMO3-226ENST00000541589 PRKCZQ05513 592 aa9.65□□□□□ -0.87
LMO3-226ENST00000541589 ANKRD23Q86SG2 305 aa9.65□□□□□ -0.87
LMO3-226ENST00000541589 SPATA5Q8NB90 893 aa9.65□□□□□ -0.87
LMO3-226ENST00000541589 OSBP2Q969R2 916 aa9.65□□□□□ -0.87
LMO3-226ENST00000541589 PIH1D3Q9NQM4 214 aaKnown RBP9.65□□□□□ -0.87
LMO3-226ENST00000541589 PDRG1Q9NUG6 133 aa9.65□□□□□ -0.87
LMO3-226ENST00000541589 LIMCH1Q9UPQ0 1083 aa9.65□□□□□ -0.87
LMO3-226ENST00000541589 FAM205AQ6ZU69 1335 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 TCP10L2B9ZVM9 353 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 HSPD1P10809 573 aaKnown RBP9.64□□□□□ -0.87
LMO3-226ENST00000541589 BCRP11274 1271 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 MOGSQ13724 837 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 RASGRF1Q13972 1273 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 UBE3CQ15386 1083 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 SLFNL1Q499Z3 407 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 BLOC1S2Q6QNY1 142 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 ZNF804AQ7Z570 1209 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 ZKSCAN4Q969J2 545 aaPredicted RBP9.64□□□□□ -0.87
LMO3-226ENST00000541589 ZSCAN31Q96LW9 406 aaPredicted RBP9.64□□□□□ -0.87
LMO3-226ENST00000541589 ALDH8A1Q9H2A2 487 aaPredicted RBP9.64□□□□□ -0.87
LMO3-226ENST00000541589 PAK6Q9NQU5 681 aaPredicted RBP9.64□□□□□ -0.87
LMO3-226ENST00000541589 BIN2Q9UBW5 565 aaPredicted RBP9.64□□□□□ -0.87
LMO3-226ENST00000541589 GABRQQ9UN88 632 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 JAG2Q9Y219 1238 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 ALPK3Q96L96 1907 aa9.64□□□□□ -0.87
LMO3-226ENST00000541589 PDHXO00330 501 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
LMO3-226ENST00000541589 CYP21A2P08686 494 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 RPS6KB1P23443 525 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 TNNI2P48788 182 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 PPATQ06203 517 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 ANKRD1Q15327 319 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 CAVIN4Q5BKX8 364 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 SLC9C2Q5TAH2 1124 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 NOL8Q76FK4 1167 aaKnown RBP9.63□□□□□ -0.87
LMO3-226ENST00000541589 TDHQ8IZJ6 230 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 ZGPATQ8N5A5 531 aaKnown RBP9.63□□□□□ -0.87
LMO3-226ENST00000541589 PXYLP1Q8TE99 480 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 PAWRQ96IZ0 340 aaKnown RBP9.63□□□□□ -0.87
LMO3-226ENST00000541589 WRNIP1Q96S55 665 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 PRDM6Q9NQX0 595 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 SH2B1Q9NRF2 756 aaPredicted RBP9.63□□□□□ -0.87
LMO3-226ENST00000541589 GNL3LQ9NVN8 582 aaKnown RBP9.63□□□□□ -0.87
LMO3-226ENST00000541589 CTNNA3Q9UI47 895 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 KCNH4Q9UQ05 1017 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 DOCK2Q92608 1830 aa9.63□□□□□ -0.87
LMO3-226ENST00000541589 MYH7P12883 1935 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 SEMA3EO15041 775 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 ADCY3O60266 1144 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 TFRCP02786 760 aaKnown RBP9.62□□□□□ -0.87
LMO3-226ENST00000541589 HMGB1P09429 215 aaKnown RBP9.62□□□□□ -0.87
LMO3-226ENST00000541589 CPA1P15085 419 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 PDE6AP16499 860 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 MCM4P33991 863 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 FCGRTP55899 365 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 MAP3K12Q12852 859 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 DIS3LQ8TF46 1054 aaKnown RBP9.62□□□□□ -0.87
LMO3-226ENST00000541589 TNPO1Q92973 898 aaKnown RBP9.62□□□□□ -0.87
LMO3-226ENST00000541589 DEFB118Q96PH6 123 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 GBP4Q96PP9 640 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 NEK1Q96PY6 1258 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 PUS7LQ9H0K6 701 aaKnown RBP9.62□□□□□ -0.87
LMO3-226ENST00000541589 CDHR5Q9HBB8 845 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 TTF2Q9UNY4 1162 aaKnown RBP9.62□□□□□ -0.87
LMO3-226ENST00000541589 ZNF532Q9HCE3 1301 aa9.62□□□□□ -0.87
LMO3-226ENST00000541589 TCRBV5S4A2TA0A5A2 114 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 GOLGA8CPA6NN73 597 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 GPAA1O43292 621 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 INHAP05111 366 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 MAGEA10P43363 369 aaPredicted RBP9.61□□□□□ -0.87
LMO3-226ENST00000541589 CRKP46108 304 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 IRF5Q13568 498 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 MFSD14BQ5SR56 506 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 THSD4Q6ZMP0 1018 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 CLEC17AQ6ZS10 378 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 NECAB2Q7Z6G3 386 aa9.61□□□□□ -0.87
LMO3-226ENST00000541589 LAPTM4BQ86VI4 370 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms