RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 DRC1Q96MC2 740 aa6.4□□□□□ -1.38
SNHG1-217ENST00000541578 ASPNQ9BXN1 380 aa6.4□□□□□ -1.38
SNHG1-217ENST00000541578 PPP1R1BQ9UD71 204 aaPredicted RBP6.4□□□□□ -1.38
SNHG1-217ENST00000541578 LRRN2O75325 713 aa6.39□□□□□ -1.39
SNHG1-217ENST00000541578 TPP2P29144 1249 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-217ENST00000541578 SF3A1Q15459 793 aaKnown RBP6.39□□□□□ -1.39
SNHG1-217ENST00000541578 LRRFIP1Q32MZ4 808 aaKnown RBP6.39□□□□□ -1.39
SNHG1-217ENST00000541578 CREG2Q8IUH2 290 aa6.39□□□□□ -1.39
SNHG1-217ENST00000541578 FLAD1Q8NFF5 587 aa6.39□□□□□ -1.39
SNHG1-217ENST00000541578 SREK1Q8WXA9 508 aaKnown RBP6.39□□□□□ -1.39
SNHG1-217ENST00000541578 CCDC120Q96HB5 630 aa6.39□□□□□ -1.39
SNHG1-217ENST00000541578 C8orf37Q96NL8 207 aa6.39□□□□□ -1.39
SNHG1-217ENST00000541578 GPR62Q9BZJ7 368 aa6.39□□□□□ -1.39
SNHG1-217ENST00000541578 CTNND2Q9UQB3 1225 aa6.39□□□□□ -1.39
SNHG1-217ENST00000541578 CCDC180Q9P1Z9 1646 aa6.39□□□□□ -1.39
SNHG1-217ENST00000541578 RECKO95980 971 aa6.38□□□□□ -1.39
SNHG1-217ENST00000541578 SRFP11831 508 aa6.38□□□□□ -1.39
SNHG1-217ENST00000541578 ZNF394Q53GI3 561 aa6.38□□□□□ -1.39
SNHG1-217ENST00000541578 CDCP2Q5VXM1 449 aa6.38□□□□□ -1.39
SNHG1-217ENST00000541578 OVOS1Q6IE37 1185 aa6.38□□□□□ -1.39
SNHG1-217ENST00000541578 ATG4CQ96DT6 458 aa6.38□□□□□ -1.39
SNHG1-217ENST00000541578 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNHG1-217ENST00000541578 CNNM2Q9H8M5 875 aa6.38□□□□□ -1.39
SNHG1-217ENST00000541578 PCDHGB7Q9Y5F8 929 aa6.38□□□□□ -1.39
SNHG1-217ENST00000541578 WASH4PA8MWX3 477 aa6.37□□□□□ -1.39
SNHG1-217ENST00000541578 UBOX5O94941 541 aa6.37□□□□□ -1.39
SNHG1-217ENST00000541578 ESR1P03372 595 aa6.37□□□□□ -1.39
SNHG1-217ENST00000541578 AFMP43652 599 aa6.37□□□□□ -1.39
SNHG1-217ENST00000541578 RNF4P78317 190 aa6.37□□□□□ -1.39
SNHG1-217ENST00000541578 RAD51AP2Q09MP3 1159 aa6.37□□□□□ -1.39
SNHG1-217ENST00000541578 GAB4Q2WGN9 574 aa6.37□□□□□ -1.39
SNHG1-217ENST00000541578 NLRC3Q7RTR2 1065 aa6.37□□□□□ -1.39
SNHG1-217ENST00000541578 TSPYL5Q86VY4 417 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-217ENST00000541578 FAM168AQ92567 244 aa6.37□□□□□ -1.39
SNHG1-217ENST00000541578 ALPK1Q96QP1 1244 aa6.37□□□□□ -1.39
SNHG1-217ENST00000541578 SLAMF8Q9P0V8 285 aa6.37□□□□□ -1.39
SNHG1-217ENST00000541578 DDX41Q9UJV9 622 aaKnown RBP6.37□□□□□ -1.39
SNHG1-217ENST00000541578 CARMIL2Q6F5E8 1435 aa6.36□□□□□ -1.39
SNHG1-217ENST00000541578 GDNFP39905 211 aa6.36□□□□□ -1.39
SNHG1-217ENST00000541578 NAALADL2Q58DX5 795 aa6.36□□□□□ -1.39
SNHG1-217ENST00000541578 ZNF654Q8IZM8 581 aa6.36□□□□□ -1.39
SNHG1-217ENST00000541578 TMEM40Q8WWA1 233 aa6.36□□□□□ -1.39
SNHG1-217ENST00000541578 VWCEQ96DN2 955 aa6.36□□□□□ -1.39
SNHG1-217ENST00000541578 KRTAP9-2Q9BYQ4 174 aa6.36□□□□□ -1.39
SNHG1-217ENST00000541578 ASCC2Q9H1I8 757 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-217ENST00000541578 ANTXR1Q9H6X2 564 aa6.36□□□□□ -1.39
SNHG1-217ENST00000541578 DUSP13Q9UII6 198 aa6.36□□□□□ -1.39
SNHG1-217ENST00000541578 POLR2BP30876 1174 aaKnown RBP6.35□□□□□ -1.39
SNHG1-217ENST00000541578 CCNFP41002 786 aa6.35□□□□□ -1.39
SNHG1-217ENST00000541578 RACK1P63244 317 aaKnown RBP6.35□□□□□ -1.39
SNHG1-217ENST00000541578 CLEC16AQ2KHT3 1053 aa6.35□□□□□ -1.39
SNHG1-217ENST00000541578 TTC6Q86TZ1 520 aa6.35□□□□□ -1.39
SNHG1-217ENST00000541578 ZSWIM9Q86XI8 627 aa6.35□□□□□ -1.39
SNHG1-217ENST00000541578 DNAJC25-GNG10A0A024R161 153 aa6.34□□□□□ -1.39
SNHG1-217ENST00000541578 MEIS3P2A8K0S8 358 aa6.34□□□□□ -1.39
SNHG1-217ENST00000541578 CLEC3AO75596 197 aa6.34□□□□□ -1.39
SNHG1-217ENST00000541578 IMPDH2P12268 514 aa6.34□□□□□ -1.39
SNHG1-217ENST00000541578 NME1P15531 152 aaKnown RBP6.34□□□□□ -1.39
SNHG1-217ENST00000541578 LTKP29376 864 aa6.34□□□□□ -1.39
SNHG1-217ENST00000541578 EGR3Q06889 387 aa6.34□□□□□ -1.39
SNHG1-217ENST00000541578 KCNMB1Q16558 191 aa6.34□□□□□ -1.39
SNHG1-217ENST00000541578 NBPF12Q5TAG4 269 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-217ENST00000541578 METTL16Q86W50 562 aaKnown RBP6.34□□□□□ -1.39
SNHG1-217ENST00000541578 ENOX1Q8TC92 643 aaKnown RBP6.34□□□□□ -1.39
SNHG1-217ENST00000541578 FERD3LQ96RJ6 166 aa6.34□□□□□ -1.39
SNHG1-217ENST00000541578 C19orf73Q9NVV2 129 aa6.34□□□□□ -1.39
SNHG1-217ENST00000541578 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-217ENST00000541578 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-217ENST00000541578 RAC2P15153 192 aa6.33□□□□□ -1.4
SNHG1-217ENST00000541578 NBPF9Q3BBW0 867 aa6.33□□□□□ -1.4
SNHG1-217ENST00000541578 RALGPS1Q5JS13 557 aa6.33□□□□□ -1.4
SNHG1-217ENST00000541578 FYB2Q5VWT5 728 aa6.33□□□□□ -1.4
SNHG1-217ENST00000541578 OGFOD2Q6N063 350 aa6.33□□□□□ -1.4
SNHG1-217ENST00000541578 KIRREL1Q96J84 757 aa6.33□□□□□ -1.4
SNHG1-217ENST00000541578 ADAMTS10Q9H324 1103 aa6.33□□□□□ -1.4
SNHG1-217ENST00000541578 GOLGA2P5Q9HBQ8 144 aa6.33□□□□□ -1.4
SNHG1-217ENST00000541578 TMEM59LQ9UK28 342 aa6.33□□□□□ -1.4
SNHG1-217ENST00000541578 ZNRF3Q9ULT6 936 aa6.33□□□□□ -1.4
SNHG1-217ENST00000541578 PCDHA11Q9Y5I1 949 aa6.33□□□□□ -1.4
SNHG1-217ENST00000541578 SHISA3A0PJX4 238 aa6.32□□□□□ -1.4
SNHG1-217ENST00000541578 TNFRSF10CO14798 259 aa6.32□□□□□ -1.4
SNHG1-217ENST00000541578 NMIQ13287 307 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-217ENST00000541578 GNL2Q13823 731 aaKnown RBP6.32□□□□□ -1.4
SNHG1-217ENST00000541578 TMEM67Q5HYA8 995 aa6.32□□□□□ -1.4
SNHG1-217ENST00000541578 C9orf131Q5VYM1 1079 aa6.32□□□□□ -1.4
SNHG1-217ENST00000541578 FBXW10Q5XX13 1052 aa6.32□□□□□ -1.4
SNHG1-217ENST00000541578 INTS3Q68E01 1043 aaKnown RBP6.32□□□□□ -1.4
SNHG1-217ENST00000541578 POU5F2Q8N7G0 328 aa6.32□□□□□ -1.4
SNHG1-217ENST00000541578 UBXN4Q92575 508 aa6.32□□□□□ -1.4
SNHG1-217ENST00000541578 SYTL4Q96C24 671 aaPredicted RBP6.32□□□□□ -1.4
SNHG1-217ENST00000541578 SLC9A7Q96T83 725 aa6.32□□□□□ -1.4
SNHG1-217ENST00000541578 CCSER2Q9H7U1 834 aa6.32□□□□□ -1.4
SNHG1-217ENST00000541578 FAM53CQ9NYF3 392 aa6.32□□□□□ -1.4
SNHG1-217ENST00000541578 KRTAP9-6A0A140TA67 174 aa6.31□□□□□ -1.4
SNHG1-217ENST00000541578 HK2P52789 917 aa6.31□□□□□ -1.4
SNHG1-217ENST00000541578 HDLBPQ00341 1268 aaKnown RBP6.31□□□□□ -1.4
SNHG1-217ENST00000541578 PAK2Q13177 524 aa6.31□□□□□ -1.4
SNHG1-217ENST00000541578 NT5DC4Q86YG4 428 aa6.31□□□□□ -1.4
SNHG1-217ENST00000541578 TMEM192Q8IY95 271 aa6.31□□□□□ -1.4
SNHG1-217ENST00000541578 SYTL5Q8TDW5 730 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms